Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30137
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 246 IDVFTSIFETVNCFSRLLIALLYCNCVIIL 157
           + VF +IF   +C+    + L+  N  IIL
Sbjct: 806 VGVFLTIFNAAHCYLATELVLMLKNRYIIL 835


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 386 HRSRFSTQRCCYSADRP 436
           HR    ++RCCY A  P
Sbjct: 606 HRLAARSRRCCYHAVAP 622


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 386 HRSRFSTQRCCYSADRP 436
           HR    ++RCCY A  P
Sbjct: 498 HRLAARSRRCCYHAVAP 514


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 265 FCYAKIY*CLY*YLRNCQLFFTATYCVIIL 176
           +C   I  C+Y + R   +F T  YC   L
Sbjct: 289 YCALIILLCIYYFCRAFIIFPTHFYCAFSL 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,979
Number of Sequences: 336
Number of extensions: 3025
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)