Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30136
         (710 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   4.3  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    22   5.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -2

Query: 709 GWLLRQ*SPWNTP*RIPTSMATVLLS*ATNAFHGVP 602
           GW+ R   P      +P    T  LS A+NA  G P
Sbjct: 245 GWIQRGADPQKIALGLPVYGKTFTLSSASNAKLGAP 280


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = -1

Query: 653 HGHRPAVMSDQRLSWCPMSVF*AP*NTFGSSPQRQFCLPKLA 528
           HG     + + RL W       A  N FG+     FC+ K A
Sbjct: 49  HGVSRKNVQEIRLEWKSFRFVYAVYNIFGAFVMGLFCILKFA 90


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 646 WPWKSESAKECSKDFTAEAT 705
           WP   ++ + C+K+F  EA+
Sbjct: 342 WPPAPQTDRLCNKNFVIEAS 361


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,038
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)