Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30135
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 125 3e-29
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 7e-17
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 78 8e-15
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 68 7e-12
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 66 3e-11
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 62 3e-10
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 61 1e-09
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 61 1e-09
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 54 2e-07
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 53 3e-07
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 52 6e-07
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 51 1e-06
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 48 8e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 47 2e-05
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 44 1e-04
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 43 3e-04
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 42 5e-04
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 42 7e-04
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 41 9e-04
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 41 9e-04
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 41 0.001
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 40 0.002
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 38 0.011
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 38 0.011
SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_14172| Best HMM Match : VHP (HMM E-Value=3.8) 33 0.24
SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 32 0.41
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_47383| Best HMM Match : LON (HMM E-Value=1.3) 30 2.2
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 29 2.9
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_26411| Best HMM Match : GAS2 (HMM E-Value=2.3) 28 6.7
SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 125 bits (302), Expect = 3e-29
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL PTRELAQQ+Q+VA G +R+TC++GGAPK Q R+LERGVEI IATPGRLID
Sbjct: 136 LVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLID 195
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
LE TNL+RCTYLVLDEADRML
Sbjct: 196 MLESRKTNLRRCTYLVLDEADRML 219
Score = 84.2 bits (199), Expect = 1e-16
Identities = 36/45 (80%), Positives = 40/45 (88%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGFEPQIR II+QIRPDRQTLMWSATWPKEV+ LA D+L DY+ I
Sbjct: 221 MGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQGLAHDFLSDYVHI 265
Score = 44.4 bits (100), Expect = 1e-04
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 116
G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 75 GRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = +2
Query: 188 YILPAIVHINNQPPIRRGDGPIV 256
+ILP IVHIN+QP ++ GDGPIV
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIV 135
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 668 SANHNILPIVDICQEH*KK 724
+ANH IL IVD+C++H K+
Sbjct: 273 TANHKILQIVDVCEDHEKE 291
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 94.7 bits (225), Expect = 7e-20
Identities = 47/83 (56%), Positives = 55/83 (66%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+ APTREL QQI A FG + VFGG K EQ++ L+ G EIV+ATPGRLID
Sbjct: 594 LICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPGRLID 653
Query: 436 FLEKGTTNLQRCTYLVLDEADRM 504
++ TNL R TYLV DEADRM
Sbjct: 654 HVKAKATNLHRVTYLVFDEADRM 676
Score = 48.8 bits (111), Expect = 4e-06
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPIV 256
++TGSGKT A++ PA+VHI +QP ++ GDGPIV
Sbjct: 561 AKTGSGKTAAFLWPALVHIMDQPELQVGDGPIV 593
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +3
Query: 21 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK----RVPAKRWP 188
P F F + + ++ + Y +PT IQ Q PIA+SG++++G+AK + A WP
Sbjct: 515 PCISFAHFGFDEQMMASIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 91.5 bits (217), Expect = 6e-19
Identities = 48/108 (44%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+V+ PTRELA QI + F + +R CV+GG EQ +L+RG EI++ TPGR+ID
Sbjct: 148 IVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMID 207
Query: 436 FLEKG---TTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDRL 570
L TN QRCTYLVLDEADRM +D+ + + + +Y + R+
Sbjct: 208 MLTANNGRVTNCQRCTYLVLDEADRM--FDMGFEPQITKIRYPKVMRI 253
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 8/53 (15%)
Frame = +3
Query: 510 MGFEPQIRKI--------IEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGFEPQI KI I+ IRPDRQT+M+SAT+P++++ LA L I+I
Sbjct: 236 MGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEALARKILDKPIEI 288
Score = 37.9 bits (84), Expect = 0.008
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGV 158
G P++ + + + +K Y++PTPIQAQ P+ MSG++++ +
Sbjct: 97 GKNAPKPVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIAI 148
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 86.6 bits (205), Expect = 2e-17
Identities = 41/95 (43%), Positives = 58/95 (61%)
Frame = +1
Query: 223 TAYSER*WSDCLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVE 402
+++SE + +APTRELA QI A F H + +R +GG Q R L+ G
Sbjct: 781 SSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCN 840
Query: 403 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
+++ TPGRL DF+EKG +L+ +L+LDEADRML
Sbjct: 841 LLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRML 875
Score = 72.9 bits (171), Expect = 2e-13
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 12/223 (5%)
Frame = +3
Query: 6 VEVHNPIQY---FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK---- 164
V +NP+++ FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 701 VSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQTGSG 760
Query: 165 RVPAKRWPTSCQPLCT*ITNRLFGEVMV-RLFGLGAYQRVSTTNSASCCRFWTHILCS*H 341
+ A P + +T+ F E + + + ++ +F +
Sbjct: 761 KTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKFAHGTMLRPV 820
Query: 342 VCVWWCS*KRASPGLGEGSRNSHCYSR*IN*FLGKGHNQLTAVHIFSS**G*SYVGMGFE 521
VC S L G + F+ KG L + + MGFE
Sbjct: 821 VCYGGVSVSHQLRQLQSGCNLLVGTPGRLTDFIEKGKVSLKGLQFLILDEADRMLDMGFE 880
Query: 522 PQIRKIIEQI----RPDRQTLMWSATWPKEVKKLAEDYLGDYI 638
P IR+I+E + + +RQTLM+SAT+P+E+++LA D+L DY+
Sbjct: 881 PAIRRIVESMGMPDKSERQTLMFSATFPEEIQRLAGDFLNDYL 923
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINN 220
+QTGSGKT A++LP + + N
Sbjct: 755 AQTGSGKTAAFLLPVMTSMMN 775
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 84.6 bits (200), Expect = 7e-17
Identities = 45/98 (45%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Frame = +1
Query: 223 TAYSER*WSDC---LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLER 393
T Y ++ DC LVLAPTRELAQQIQ+V G +V+ GG RE LE
Sbjct: 149 TNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEE 208
Query: 394 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
GV +V+ TPGR+ D + +G N + VLDEAD ML
Sbjct: 209 GVHVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEML 246
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
GF+ QI + ++ Q ++ SAT P +V ++ ++ D ++I
Sbjct: 249 GFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRI 292
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 77.8 bits (183), Expect = 8e-15
Identities = 38/104 (36%), Positives = 61/104 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LV+APTRELA+Q+ + S + C++GG P Q + G+++++ TPGR++D
Sbjct: 151 LVMAPTRELAKQVGNEFENL--KSNLEVYCIYGGMPYEPQENAINSGLDVLVGTPGRILD 208
Query: 436 FLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
F+ +GT +L + ++VLDE DRML E+ L+ DR
Sbjct: 209 FMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDR 252
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L +APTRELA+QI A F + ++ +GG QA LERG ++ TPGRL D
Sbjct: 556 LCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVPYQASQLERGCHFLVGTPGRLQD 615
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
F+ + L +L+LDEADRML
Sbjct: 616 FVSREKIYLGSIQHLILDEADRML 639
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ----IRPDRQTLMWSATWPKEVKKLAEDYL-GDYI 638
+GF P I K+IE+ + RQTLM+SAT+P E++ LA +L DY+
Sbjct: 641 LGFGPDIHKLIEESNMTAKESRQTLMFSATFPDEIQHLAGSFLKPDYL 688
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
I F E F + + + GY+ PTP+Q PI M+G++L+ A+
Sbjct: 478 ITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMACAQ 524
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQ 223
+QTGSGKT AY+LP + + Q
Sbjct: 523 AQTGSGKTAAYMLPVLTSLIKQ 544
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/66 (46%), Positives = 43/66 (65%)
Frame = +1
Query: 310 DFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLD 489
DF + S R V+GGA Q R+L+R +++ATPGRL+D +++G L +LVLD
Sbjct: 947 DFSYRSLCRPCVVYGGADIGSQLRELDRNCHLLVATPGRLVDMMDRGRVGLDSIRFLVLD 1006
Query: 490 EADRML 507
EADRML
Sbjct: 1007 EADRML 1012
Score = 54.8 bits (126), Expect = 7e-08
Identities = 28/47 (59%), Positives = 37/47 (78%), Gaps = 4/47 (8%)
Frame = +3
Query: 510 MGFEPQIRKIIEQ-IRPD---RQTLMWSATWPKEVKKLAEDYLGDYI 638
MGFEPQIR+I++Q P RQTLM+SAT+PKE++ LA D+L +YI
Sbjct: 1014 MGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPKEIQMLARDFLENYI 1060
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
I FE+ + + + V GYK+PTP+Q PI ++L+ A+
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMACAQ 920
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQPP 229
+QTGSGKT A+++P + I + P
Sbjct: 919 AQTGSGKTAAFLIPILSRIYMEGP 942
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 68.1 bits (159), Expect = 7e-12
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 2/106 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L PTRELA QI + G V+ + GG QA L + I+IATPGRLID
Sbjct: 36 LILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMSQALMLAKKPHIIIATPGRLID 95
Query: 436 FLE--KGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTDR 567
LE KG +L+ YLV+DEADR+L +++ + E + + +T R
Sbjct: 96 HLENTKG-FSLRTLKYLVMDEADRIL--NMDFEKEDYIHRVGRTAR 138
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
+VL PTRELA QI G ++ + GG +QA L +VIATPGRL D
Sbjct: 79 VVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLAD 138
Query: 436 FLEK-GTTNLQRCTYLVLDEADRML 507
++ T NL++ +LVLDEADR+L
Sbjct: 139 HIKSTDTLNLKKIQFLVLDEADRLL 163
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 66.1 bits (154), Expect = 3e-11
Identities = 37/84 (44%), Positives = 45/84 (53%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
LVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR+ D
Sbjct: 69 LVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRVFD 128
Query: 436 FLEKGTTNLQRCTYLVLDEADRML 507
+ + + LVLDEAD ML
Sbjct: 129 MIRRRNLRTRSIKMLVLDEADEML 152
Score = 31.9 bits (69), Expect = 0.55
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 513 GFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
GF+ QI + + P Q ++ SAT P E+ ++ ++ D I+I
Sbjct: 155 GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRI 198
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 62.9 bits (146), Expect = 3e-10
Identities = 25/45 (55%), Positives = 37/45 (82%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGFEP+I+KI+ IRPDRQT+M SATWP V+++A+ Y+ D +++
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRV 45
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 62.5 bits (145), Expect = 3e-10
Identities = 35/93 (37%), Positives = 54/93 (58%)
Frame = +1
Query: 253 CLVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
C+V+ P RELA QI + A H + R+ + GG ++ DLE V++++ATPG L+
Sbjct: 459 CIVV-PARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLLVATPGTLL 517
Query: 433 DFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKS 531
+ +K T+LV+DEAD M +D + KS
Sbjct: 518 KYRQKDRLFFSDLTHLVIDEADTM--FDASFKS 548
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQPPIRRG 241
+QTGSGKTLAY+ P +VH + R G
Sbjct: 422 AQTGSGKTLAYLAP-LVHRLREDEERHG 448
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 61.3 bits (142), Expect = 8e-10
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
++++PTREL+ Q VA D + GG ++ +A L++GV ++IATPGRL+D
Sbjct: 648 IIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKAEAERLQKGVNLLIATPGRLLD 707
Query: 436 FLEKGTTNL-QRCTYLVLDEADRML 507
L+ L + LV+DEADR+L
Sbjct: 708 HLQNTQGFLYKNLQCLVIDEADRIL 732
Score = 34.7 bits (76), Expect = 0.078
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAE 617
+GFE ++R+II + RQT+++SAT K V+ LA+
Sbjct: 734 IGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 74 KDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAIVHINN-QPPIRRGDGP 250
KD G +A ++ ++TGSGKTLA+++P + + Q R G G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVPVVELLYKLQFKTRNGTGV 647
Query: 251 IVWS 262
I+ S
Sbjct: 648 IIIS 651
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +3
Query: 66 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
QG+K MG+ T IQ + + G++L+G AK
Sbjct: 585 QGIKDMGFTTMTEIQHKSIAPLLKGRDLLGAAK 617
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVIA 414
LVL PTRELA Q Q+ + G + GG ++ L V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 415 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEK 537
TPGR++D ++K ++ +C LV+DEAD++L D E+
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 179
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 60.9 bits (141), Expect = 1e-09
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERG-------VEIVIA 414
LVL PTRELA Q Q+ + G + GG ++ L V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 415 TPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEK 537
TPGR++D ++K ++ +C LV+DEAD++L D E+
Sbjct: 179 TPGRVLDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQ 219
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +3
Query: 33 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAK 179
FE+ + G+ G+ +P+PIQ + P+A++G++++ AK K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 53.6 bits (123), Expect = 2e-07
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAP-KREQARDLERGVEIVIATPGRLI 432
LV++PTRELA Q +V G+ + + GG K EQ R ++ IV+ TPGRL+
Sbjct: 126 LVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLKNEQKRIMK--TNIVVCTPGRLL 183
Query: 433 DFLEKGTTNLQRCT---YLVLDEADRML 507
+++ T N CT LVLDEADR+L
Sbjct: 184 QHMDE-TPNFD-CTSLQILVLDEADRIL 209
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYI 638
MGF P + IIE + +RQTL++SAT + VK LA L Y+
Sbjct: 211 MGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYV 253
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +3
Query: 24 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
++ F + G+ G+ PT IQ QG P+A+SG++++G AK
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/54 (40%), Positives = 36/54 (66%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++GVA+
Sbjct: 93 GGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGVAE 146
Score = 41.1 bits (92), Expect = 9e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPK 366
L+LAPTRELAQQI++ FG +R V GGA +
Sbjct: 182 LILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGADR 218
Score = 33.1 bits (72), Expect = 0.24
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 24/65 (36%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQ-----IRPD-------------------RQTLMWSATWPKEVKKL 611
+ MGFEP+++KI+E ++PD RQT+M++AT P +V++L
Sbjct: 220 IDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMFTATMPPQVERL 279
Query: 612 AEDYL 626
A++YL
Sbjct: 280 AKNYL 284
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQPPIRR 238
++TGSGKT A+ +P +V I P I R
Sbjct: 145 AETGSGKTAAFAIPLLVWIMGLPKIER 171
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 429
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+ + T NL+ + +LDE D+ML
Sbjct: 179 LALTREKTLNLKHAKHFILDECDKML 204
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 51.6 bits (118), Expect = 6e-07
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADF-GHTSYVRNTCVFGGAPKREQARDLERGV-EIVIATPGRL 429
LV+ TRELA QI + F + S ++ FGG ++ + L+ IV+ TPGR+
Sbjct: 119 LVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRI 178
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRML 507
+ + T NL+ + +LDE D+ML
Sbjct: 179 LALTREKTLNLKHAKHFILDECDKML 204
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/82 (36%), Positives = 41/82 (50%)
Frame = +1
Query: 322 TSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADR 501
T+ + V GG P Q L G ++V+ATPGRL+D L + TYLV+DE DR
Sbjct: 193 TARYKAVAVCGGVPVSTQTIALREGADVVVATPGRLLD--------LYKITYLVMDEPDR 244
Query: 502 MLVWDLNHKSEKSLSKYAQTDR 567
ML + + K + T R
Sbjct: 245 MLGMGMEEQLRKIVGLATGTSR 266
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKR 182
G + PI+ F + N P + + ++ PTPIQ Q MSG++++G+A+ K
Sbjct: 64 GEDCPKPIESFHDLNLPPELSTYLAKKNFQVPTPIQMQSLSCVMSGRDIIGLAETGSGKT 123
Query: 183 WPTSCQPLC 209
S PLC
Sbjct: 124 LAYSL-PLC 131
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPD---RQTLMWSATWPKEVKKLA 614
+GMG E Q+RKI+ RQTL+WSAT P+ +++LA
Sbjct: 246 LGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLA 285
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHINNQPPIRRGDGPI 253
++TGSGKTLAY LP + + + P GD P+
Sbjct: 116 AETGSGKTLAYSLPLCMLLRTKAPSNPGDTPV 147
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 48.0 bits (109), Expect = 8e-06
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRL 429
LVL+PTRELA QIQ+V G V+ GG E R L+ G IV TPGR+
Sbjct: 7 LVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGRV 64
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.0 bits (109), Expect = 8e-06
Identities = 25/68 (36%), Positives = 40/68 (58%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L++APTRELA Q++ + V+ + GG +Q R L++ EIV+ATPGRL +
Sbjct: 222 LIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRLWE 281
Query: 436 FLEKGTTN 459
+ + T+
Sbjct: 282 LISQVFTH 289
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 397 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 507
V +V+ + EK +N+Q YLV+DEADRM+
Sbjct: 316 VVVVVVVVDTSVTNQEKHVSNIQLLRYLVIDEADRMV 352
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +2
Query: 158 SQTGSGKTLAYILPAIVHI 214
++TGSGKTLA+ +P I HI
Sbjct: 175 AETGSGKTLAFGIPIIQHI 193
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTC-VFGGAPKREQARDLERGVEIVIATPGRLI 432
++L PTRE+A Q++ V G Y C VF G E+ + + I + TPGR+
Sbjct: 85 IILTPTREIAVQVKDVICAIG-CHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRVK 143
Query: 433 DFLEKGTTNLQRCTYLVLDEADRML 507
+E+ + +LDEAD++L
Sbjct: 144 YLIEQKYLKTESVRMFILDEADKLL 168
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 44.8 bits (101), Expect = 7e-05
Identities = 27/82 (32%), Positives = 43/82 (52%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 435
L+L+PTRELA Q Q+ + G + ++++ + GG + V+ATPGR +
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFLH 400
Query: 436 FLEKGTTNLQRCTYLVLDEADR 501
+ + L Y+V DEADR
Sbjct: 401 VVMEMELKLSSVEYVVFDEADR 422
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 44.0 bits (99), Expect = 1e-04
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFG-HTSYVR-NTCVFGGA-PKREQARDLERGVEIVIATPGR 426
+ L+PT ELA+Q +VA G H +++ N V G P+ ++ D I+I TPG
Sbjct: 177 ICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQKCTD-----HIIIGTPGT 231
Query: 427 LIDFLEKGTT-NLQRCTYLVLDEADRMLV----WDLNHKSEKSLSKYAQ 558
L+D++ K ++ + VLDEAD M+ D + + KSL K Q
Sbjct: 232 LLDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQ 280
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
Frame = +3
Query: 3 GVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVG 155
G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+ G G
Sbjct: 151 GADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPLMAHGPKKSG 205
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +1
Query: 256 LVLAPTRELAQQIQQVAADFGHTSYVR-NTCVFGGAPKREQARDLERGVEIVIATPGRLI 432
+V++PTRELAQQI + R + A + +I++ TP RL+
Sbjct: 209 VVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLV 268
Query: 433 DFL--EKGTTNLQRCTYLVLDEADRM 504
L E L +L+LDEAD++
Sbjct: 269 HLLTQEPPGIELHNVEWLILDEADKL 294
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 41.9 bits (94), Expect = 5e-04
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +3
Query: 3 GVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKR 182
G V +P+ F +F + + + + GY PTPIQ Q P+ +SG++++ A K
Sbjct: 188 GEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKL 247
Query: 183 WPTS 194
P+S
Sbjct: 248 LPSS 251
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 388 ERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
E GV++++ATPGR+++ + + +L V+DE D ML + ++ L +
Sbjct: 253 EMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILER 306
Score = 37.5 bits (83), Expect = 0.011
Identities = 15/39 (38%), Positives = 28/39 (71%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
+GFE Q+++I+E++ RQT+++SAT P ++ +A L
Sbjct: 294 LGFEQQVQQILERLSNRRQTMLFSATIPPSIEAMASRLL 332
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 41.5 bits (93), Expect = 7e-04
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +1
Query: 256 LVLAPTRELAQQ-IQQVAADFGHTSYVRNTCVFGGAPKREQA-RDLERGVEIVIATPGRL 429
+++ PTRELA Q + +V+ G S V + ++E+ +D IVI TP RL
Sbjct: 229 IIVVPTRELASQMLYEVSRLLGDKSIVASFVSGVDLSRQEKLLKDSLHPPRIVIGTPKRL 288
Query: 430 IDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLS 546
+ +++ QR +V+DE D+ L+ S+K ++
Sbjct: 289 WEIVQEHEHLFQRTKRIVIDEVDKTLLPVHQRSSQKKIA 327
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 68 RCKDNGLQRTDAHSSSRLADSYVWKEFSWRSQTGSGKTLAYILPAI 205
+ K G+ + L + K +S+TG+GK+L ++LP++
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV 219
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
+ MGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 29 IDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 41.1 bits (92), Expect = 9e-04
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 504 VGMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYL 626
+ MGFE +R I + RQTL++SAT PK+++ A+ L
Sbjct: 29 IDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSAL 69
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +3
Query: 6 VEVHNPIQY---FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVAK 164
V +NP+++ FEEAN + V+ YK+PTP+Q PI ++G++++ A+
Sbjct: 124 VSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRDVMACAQ 179
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/53 (32%), Positives = 32/53 (60%)
Frame = +1
Query: 346 VFGGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRM 504
+FGG + ++ L G E+++ATP + L++ T+L R ++V D+AD +
Sbjct: 298 IFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKRCYTSLDRLCHVVFDDADML 350
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 81 MGYKEPTPIQAQGWPIAMSGKNLVGVAKRVPAKR 182
+G PT +Q WP + G+++ GVA KR
Sbjct: 205 LGVTVPTSLQKHMWPSLLRGRDVAGVAIEGSGKR 238
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 38.7 bits (86), Expect = 0.005
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 337 NTCVFGGAPKREQARDLERGVEIVIATPGRLIDFLEKG 450
+ C+ GG RE LE GV +V+ TPGR+ D + +G
Sbjct: 6 HACI-GGTNVREDRMKLEEGVHVVVGTPGRVFDMINRG 42
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/45 (37%), Positives = 30/45 (66%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQI 644
MGF IR+++ ++ RQ L++SAT+ ++K LAE L + ++I
Sbjct: 18 MGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEI 62
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 37.5 bits (83), Expect = 0.011
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 397 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLVWDLNHKSEKSLSK 549
V+IV TPG+L DF+ +L + + +LDEAD +L N K +K
Sbjct: 136 VDIVTGTPGKLNDFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNK 186
>SB_55048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 27
Score = 33.1 bits (72), Expect = 0.24
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 382 DLERGVEIVIATPGRLIDFL 441
+L+RG EI++ TPGR+ID L
Sbjct: 3 ELKRGAEIIVCTPGRMIDML 22
>SB_14172| Best HMM Match : VHP (HMM E-Value=3.8)
Length = 83
Score = 33.1 bits (72), Expect = 0.24
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = -1
Query: 620 ILSKFLYFFGPSS*PHQSLSVWAYLLNDFSDLWFKSHTNI-RSASSRTKYVHRCKLVVPF 444
+L F Y P+ + +W +DF +W K I + +TK + K V
Sbjct: 4 VLLPFFYNQLPTLTAQEFFDIWVKFTSDFKVIWKKEQQRISKQLYEKTKKKLKEKQVENI 63
Query: 443 SKKSINLPGVAMTIS 399
SKK I++ G+ + I+
Sbjct: 64 SKKPISISGLKLKIA 78
>SB_39160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 388 ERGVEIVIATPGRLIDFLEKGTTNLQ-RCTYLVLDEADRMLVWDLNHKSEKSLSKYAQTD 564
+RGV++ + P ++ D + T L+ RC Y+V D + W NH E +L+++ +
Sbjct: 79 KRGVKVDLGFPDQMWDTPDAEVTRLKNRCEYMVEQHEDDITEWYWNHPDE-NLTQWLCIE 137
Query: 565 RL 570
R+
Sbjct: 138 RV 139
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 32.3 bits (70), Expect = 0.41
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 66 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVGVA 161
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCACA 54
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +3
Query: 9 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 122
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_47383| Best HMM Match : LON (HMM E-Value=1.3)
Length = 1528
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -1
Query: 563 SVWAYLLNDFSDLWFKSHTNIRSASSRTKYVHRCKLVVPFSKKS 432
S + Y L++F DL FK T+ TK+ + C+L+V S++S
Sbjct: 411 SQYCYTLDEFEDLTFK--TSNTGCMYLTKFFNYCQLIVDKSQES 452
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 510 MGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLGDYIQIPYR 653
MGFE I I+ + R+T ++SAT EV+ L L + +++ R
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVR 48
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 442 EKGTTNLQRCTYLVLDEADRML 507
E+ +N+Q YLV+DEADRM+
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMV 23
>SB_26411| Best HMM Match : GAS2 (HMM E-Value=2.3)
Length = 360
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = +3
Query: 501 YVGM-GFEPQIRKIIEQIRPDRQTLMWSATWP--KEVKKLAEDYLGDY 635
Y+G+ G E QI + DR+T W+ TW + +L E YLG Y
Sbjct: 259 YLGVYGTEKQICGTLPGSIWDRETDWWNTTWEYMGQRNRLVEHYLGVY 306
>SB_47096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = -1
Query: 500 RSASSRTKYVHRCKLVVPFSKKSINLPGVAMTISTPLSKSRACSLLGAPPNTHVLRT*DV 321
+ S +T+ V C + K S+ + T LSKS+A G P + + V
Sbjct: 193 KEISKKTEQVRSCGIAAQMGKDSMGVIKNISTTGNDLSKSKAMRSKGGPDSKAPSKKATV 252
Query: 320 CPKSAAT 300
P +A +
Sbjct: 253 RPSTAGS 259
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,716,467
Number of Sequences: 59808
Number of extensions: 556182
Number of successful extensions: 1308
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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