Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30134
(709 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 30 0.37
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 29 0.49
SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces pom... 29 0.65
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 29 0.65
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 29 0.65
SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.65
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 29 0.86
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 29 0.86
SPBC2F12.13 |klp5|sot1|kinesin-like protein Klp5|Schizosaccharom... 29 0.86
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.1
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 28 1.1
SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase Rqh1|... 28 1.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.5
SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon... 28 1.5
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 27 2.0
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 2.0
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 2.0
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 27 2.6
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 27 2.6
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 27 2.6
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 27 3.5
SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3 |Schizos... 27 3.5
SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion transporter|... 27 3.5
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.5
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.5
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar... 26 4.6
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 26 6.1
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 26 6.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.1
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 26 6.1
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 26 6.1
SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces p... 26 6.1
SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces... 25 8.0
>SPAC1A6.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 29.9 bits (64), Expect = 0.37
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 3/72 (4%)
Frame = +3
Query: 282 EPEDEYEINTPTAFSSSGYSTP--EPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDP 455
+P + + P SG ST +P + +T +P P P+P + P
Sbjct: 364 QPGQYNQQSQPVQSYQSGQSTQHFQPVQPIQPVQSTQYYQPSSPVQPVQNGVPAP-PMQP 422
Query: 456 IRPTQY-RPSSP 488
++ TQY +PSSP
Sbjct: 423 VQSTQYYQPSSP 434
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 29.5 bits (63), Expect = 0.49
Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = +3
Query: 273 VTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT----SQPKPPIIFNPFPQSSPSP 440
V+ + + EY +NT S+ + +N F + T T S+ ++ + F ++ P
Sbjct: 149 VSTKDKKEYSMNTSNLVQSNPPKVHDKENAFAEATGTSILSSKAVQTLLVSDFTENEPKH 208
Query: 441 VKLDPIRPTQYRPS-SPTPFNPIRTNQLTNLNL 536
+ + P PS S T P + N +L+L
Sbjct: 209 LSIRPNCKDNNTPSISNTFIEPYKENNTEHLHL 241
>SPAC8E11.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 338
Score = 29.1 bits (62), Expect = 0.65
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 438 PVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNLPEFNHFP 557
PV LD + PT PS+ FN RT +L+++ LP+ P
Sbjct: 210 PVDLDELLPT---PSTQGSFNSSRTIELSSVTLPKSEDEP 246
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 29.1 bits (62), Expect = 0.65
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
T +S+V P+ P+ +N PT G + + I + + P
Sbjct: 211 TFSRSAVVPNPSLPLNPSVLQGQVMNNPTI--PKGTPSTSIEGAKTSIPPSHAMQNP--H 266
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLNL--PEFNHF 554
N FP S+ K P++ + + P +P P + N + N + P ++ F
Sbjct: 267 NSFPASADRLQKNHPVQSSNFNPYTPAPSITVPPNYIPNTAMMGPSYSSF 316
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 29.1 bits (62), Expect = 0.65
Identities = 26/121 (21%), Positives = 48/121 (39%)
Frame = +3
Query: 69 SYSTETTNTRSHSCRRTSQARRLQARKDSTGAWFNS*SKKTRICQTVF*IRGCLTSFKSS 248
S ST TT + S S +S + + S+ + +S S + + +S SS
Sbjct: 146 SSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----SSSSSSSSSS 201
Query: 249 VTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQS 428
+ + P+T + ++ ++ SSS S P + F ++S + P S
Sbjct: 202 SSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSSSS 261
Query: 429 S 431
S
Sbjct: 262 S 262
>SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 452
Score = 29.1 bits (62), Expect = 0.65
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +3
Query: 243 SSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPK 395
+S+T+E +P ++ + +++N S+ GYST EP+++F T+ P+
Sbjct: 198 ASITEEFVEP--KDSQFNHDVNLMQG-SAPGYSTVEPEDNFASEIQTNAPE 245
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 28.7 bits (61), Expect = 0.86
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 267 KPVTEEPEDEYEINTP-TAFSSSGYSTPEPQNDFYDITTTSQ 389
+P P E+N P T+ + YS PEP DF+ T Q
Sbjct: 290 QPTGTSPSPPVEMNFPDTSDITPAYSEPEPIQDFWSDPTLDQ 331
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 28.7 bits (61), Expect = 0.86
Identities = 23/87 (26%), Positives = 38/87 (43%)
Frame = +3
Query: 234 SFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFN 413
S S D P + + ++ + FSS+ ST E +D + TT Q +
Sbjct: 251 SISPSAYDAPLLHNVDTQSIDGFVSVASHFSSA--STAESLDDGHSATTIQQGD--VSSY 306
Query: 414 PFPQSSPSPVKLDPIRPTQYRPSSPTP 494
P +S +PV + PI + +PS +P
Sbjct: 307 PLSRSVSTPVPMSPISISPAKPSPQSP 333
>SPBC2F12.13 |klp5|sot1|kinesin-like protein
Klp5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 883
Score = 28.7 bits (61), Expect = 0.86
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +3
Query: 246 SVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQ 425
SV E K + +D IN S + P N+ + PK P++F+ +
Sbjct: 634 SVLSESYK-LNSTSDDSRTINRDRVHSFP--TQPLLNNNLPRMFFVKSPKKPVVFSK--R 688
Query: 426 SSPSPVKLDPIRPTQYRPSSPTPFN-PIRTNQLTNLNLPEFNHFP 557
S V+ D T S + +N PI+T++L N+N H P
Sbjct: 689 SPKKRVRFDDSMSTS--DSGASAYNSPIQTSKLKNMNFFNTMHMP 731
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.1
Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Frame = +3
Query: 324 SSSGYSTPEPQNDFYDITTTSQPK----PPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPT 491
+SS ++ EP + T S P PP F P P ++ L P+ Y P P
Sbjct: 139 ASSAPASQEPSASGVNAPTVSAPNSMVSPPPSFQP-PSAAAPATSL----PSDYNPPPPP 193
Query: 492 PFNPIRTNQLTNLNLPE 542
P P +Q + N P+
Sbjct: 194 PPPPAVEDQAADANEPD 210
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 28.3 bits (60), Expect = 1.1
Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +3
Query: 258 EPAKPVTEEPEDEYEIN--TPTAFSSSGYSTPEPQNDFYDI-TTTSQPKPP 401
EP+ P + P + TP+AF++S +P P +++ ++ SQ P
Sbjct: 1095 EPSNPASNPPSTGFSFGAATPSAFNASASQSPAPNGIQFNLGSSNSQTNAP 1145
>SPAC2G11.12 |rqh1|hus2, rad12, rec9|RecQ type DNA helicase
Rqh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1328
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 372 ITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNLN 533
I+ TS+P P + NP +S S +++ PI+P + S+ PF + N N N
Sbjct: 184 ISNTSKPNPIVSENPISATSVS-IEI-PIKPKEL--SNNLPFPRLNNNNTNNNN 233
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect = 1.5
Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 2/83 (2%)
Frame = +3
Query: 252 TDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTT-SQPKPPIIFNPFPQS 428
T P +P P P+ S P P + + S P P P P
Sbjct: 141 TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPK 200
Query: 429 -SPSPVKLDPIRPTQYRPSSPTP 494
P P+ P+ T RPSS P
Sbjct: 201 VPPPPLSQAPVANTSSRPSSFAP 223
>SPAC8C9.15c |tif225||translation initiation factor eIF2B epsilon
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 678
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 458 PSHAIQTVFTHTFQPYQNEPINKPQPARIQPLSNRP 565
P HA+Q + Y+ P+ +P + PL+N P
Sbjct: 14 PKHALQAIVLSDSYNYRFRPLTLDKPRCLLPLANTP 49
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 27.5 bits (58), Expect = 2.0
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 13/72 (18%)
Frame = +3
Query: 327 SSGYSTPEPQN--DFY-DITTTSQPKPPIIFNP--FPQSSPSPVKL---DPIRPTQYRPS 482
SS YST + Y DI+ + P+P + +P P +PSP++L D +RP P
Sbjct: 184 SSPYSTTSSTSLYSLYNDISLSCSPEPYLPLSPTRSPARTPSPIRLYSSDALRPQS--PL 241
Query: 483 SP-----TPFNP 503
SP TP NP
Sbjct: 242 SPSVEYLTPPNP 253
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.5 bits (58), Expect = 2.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 322 FRPAATLHPNLKMTSTTSPPLLSQNHP*SLTRS 420
F P AT PN TST +PP + +P +L S
Sbjct: 222 FSPFATSSPNFLSTSTPAPPNSNNANPSTLFSS 254
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 2.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 390 PKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTP 494
P PP + P P +P+P+ + P P P P P
Sbjct: 734 PPPPAVIVPTP--APAPIPVPPPAPIMGGPPPPPP 766
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 27.1 bits (57), Expect = 2.6
Identities = 26/100 (26%), Positives = 44/100 (44%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
T K+S + P P + +E+ +N + + + Q DI +SQ P F
Sbjct: 628 TYSKASSKNVPLSPPKQRVVNEHALNIMS--EKLQRTNLKEQTPEMDIENSSQNLP---F 682
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRTNQLTNL 530
+P SP++ P++ PSSP+P I + L N+
Sbjct: 683 SPM---KISPIRASPVKTI---PSSPSPTTNIFSAPLNNI 716
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 324 SSSGYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNP 503
S S + P P + D+++ + +P ++ + V+ + P+ +SP P P
Sbjct: 195 SCSSFPKPIPNHFENDVSSIQNTNQRVESSPASVNAAAIVRKSAVTPSSDPYNSPPPSIP 254
Query: 504 IRTNQLTNLNL-PEF 545
+ +Q TNL L P F
Sbjct: 255 LLGSQ-TNLQLAPSF 268
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +3
Query: 234 SFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQ-PKPPIIF 410
SFK+ TD+ + VT+ + P A S + +PE +D + + T+S PK I F
Sbjct: 1256 SFKTESTDDQLEKVTQTNVASNKRVAPYADSMANVGSPE--SDCFSVATSSDIPKANIDF 1313
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 26.6 bits (56), Expect = 3.5
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -1
Query: 601 KRLSFRPEYRSLRSIGKWLNSGRLRFVNWFVLIGLKGVGEDGLYCVGRMGS 449
K LSF P RSL + G + +RF N F G D LYC ++ S
Sbjct: 368 KALSFCPWQRSLLATGAGSHDKHIRFYNCF-----NGKKIDELYCGAQITS 413
>SPBC21D10.05c |ucp3|soc2|GTPase activating protein Ucp3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 601
Score = 26.6 bits (56), Expect = 3.5
Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +3
Query: 381 TSQPKPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNPIRT--NQLTNLNLPEFNHF 554
T+ I+ NP + P ++ T Y SSP+ NP + N +L +
Sbjct: 329 TNSNSSSIVQNPLQPARTGPAAINYNYTTNYSVSSPSVTNPFFDVGSSTQNASLMGSTGY 388
Query: 555 PIDLNDLY 578
P N++Y
Sbjct: 389 PSSANNVY 396
>SPAC17A2.14 ||SPAC17G6.01|CorA family magnesium ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +3
Query: 258 EPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYD 371
EP + ED+ +IN P + SS S+P+ + Y+
Sbjct: 67 EPPSEHSSNGEDDKDINNPPSMPSSVCSSPKSPHRHYE 104
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 26.6 bits (56), Expect = 3.5
Identities = 30/120 (25%), Positives = 44/120 (36%), Gaps = 5/120 (4%)
Frame = +3
Query: 189 TRICQTVF*IRGCLTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFS-SSGYSTPEPQNDF 365
T + T C TS T + PVT P T T+ +S T P
Sbjct: 438 TPVTSTPLATTNCTTSTSVPYT---STPVTSTPLTTTNCTTSTSIPYTSTPVTSTPLTTT 494
Query: 366 YDITTTSQP--KPPIIFNPFPQSSPSPVKLDPIRPTQYRPSSPTPF--NPIRTNQLTNLN 533
T+TS P P+ + + SS +PV P+ T S+ + P+ + L N
Sbjct: 495 NCTTSTSVPYTSTPVTSSNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTN 554
Score = 25.8 bits (54), Expect = 6.1
Identities = 28/92 (30%), Positives = 32/92 (34%)
Frame = +3
Query: 228 LTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 407
L S +S T + P T TPT +S ST P I TS
Sbjct: 108 LPSTSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIP------IPPTSTSSTDTN 161
Query: 408 FNPFPQSSPSPVKLDPIRPTQYRPSSPTPFNP 503
NP P +S S I PT S TP P
Sbjct: 162 SNPLPTTSTSCTTSTSIPPTGGSSSLSTPITP 193
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 3/84 (3%)
Frame = +3
Query: 243 SSVTDEPAKPVTEEPEDEYEINTPTAF---SSSGYSTPEPQNDFYDITTTSQPKPPIIFN 413
S+ T + PVT P T T+ S+ STP + T+ P+ +
Sbjct: 512 SNYTISSSTPVTSTPVTTTNCTTSTSVLYTSTPVTSTPLATTNCTTSTSVPYTSTPVTSS 571
Query: 414 PFPQSSPSPVKLDPIRPTQYRPSS 485
+ SS +PV P+ T S+
Sbjct: 572 NYTISSSTPVTSTPVTTTNCTTST 595
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 26.6 bits (56), Expect = 3.5
Identities = 21/76 (27%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPED-EYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPII 407
+SF S + A+P + D +TP+ +S YSTP TTT+
Sbjct: 300 SSFSSKREEAAAEPSSSTATDIPPPYSTPSVAGASDYSTPSAGYQTVQTTTTTTEAAAAQ 359
Query: 408 FNPFPQSSPSPVKLDP 455
+ P P PV P
Sbjct: 360 Y-PQAAFPPPPVMPQP 374
>SPBC23G7.08c |rga7||GTPase activating protein
Rga7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.2 bits (55), Expect = 4.6
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +3
Query: 243 SSVTDEPAKPVTEEPEDEYEINTPTAF---SSSGYSTPEPQNDFYDITTTSQPKPPIIFN 413
+S+ E K T+ + + I P+++ SS+G + P P N +T P P N
Sbjct: 315 ASIKHEDNKNPTDASKTKI-IQPPSSYGTGSSAGKTNP-PVNPTIKVTAAI-PSPLQNTN 371
Query: 414 PFPQSSPSPVKLDPIRP---TQYRPSSPTPFNPI 506
P P + P+P P P T ++P +P+
Sbjct: 372 PAPSTFPNPSVASPAFPNSSTSNPSTAPASASPL 405
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 25.8 bits (54), Expect = 6.1
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 1/70 (1%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTP-EPQNDFYDITTTSQPKPPII 407
TS SSV + P +Y + SSS P P+ F + + P+ PI
Sbjct: 210 TSSSSSVNSVHTPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFSVSSASDPPQTPIS 269
Query: 408 FNPFPQSSPS 437
+P +PS
Sbjct: 270 MSPPIPPTPS 279
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 327 SSGYSTPEPQNDFYDITTTSQPKPPII-FNPFPQSSPSPVKLDPIR 461
S S+ +ND ++ T+ P I +P P +SP P+ ++P++
Sbjct: 563 SKSSSSKHKENDKASVSITTTTTPSITPADPVP-TSPKPLAIEPVK 607
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 6.1
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Frame = +3
Query: 312 PTAFS-SSGYSTPEPQNDFYDITTTS----QPKPPIIFNPFPQSSPSPVKLDPIRPTQYR 476
P A S +S ST P +T ++ P PP + + + S ++ P++ +
Sbjct: 895 PAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPVQ----Q 950
Query: 477 PSSPTPFNPI 506
PS P P+ P+
Sbjct: 951 PSHPNPYTPV 960
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +3
Query: 228 LTSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSS 329
L+ KS T P + EEP EY I + F+S
Sbjct: 281 LSRTKSVETPVPMEAAEEEPATEYSIPSSVTFNS 314
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.8 bits (54), Expect = 6.1
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = +3
Query: 333 GYSTPEPQNDFYDITTTSQPKPPIIFNPFPQSSPSPVKLDPI-RPTQYRPSSPTPFN--- 500
G S+ +P + +IT +P+P + N + +PV P+ +P P P N
Sbjct: 270 GTSSSQPSENDANITALPKPEPKMYENSDLTPARTPVTPAPLEKPVNLAPEVVEPTNAAA 329
Query: 501 -PIRTN--QLTNLNLPEFNHFPIDLND 572
P++ N +LT+++ + P + D
Sbjct: 330 SPLQLNAPKLTDVDDSALAYDPTKVQD 356
>SPAC3F10.13 |ucp6||UBA domain protein Ucp6|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 612
Score = 25.8 bits (54), Expect = 6.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +3
Query: 318 AFSSSGYSTPEPQNDFYDITT----TSQPKPPIIFNPFPQSSP 434
AF SS +S P + D +T T+ KP IFN P S+P
Sbjct: 231 AFLSSYFSPPNAEFDSTFCSTLSSLTNSEKPTYIFNFKPNSTP 273
>SPBC15D4.10c |amo1||nuclear rim protein Amo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 475
Score = 25.4 bits (53), Expect = 8.0
Identities = 20/85 (23%), Positives = 36/85 (42%)
Frame = +3
Query: 231 TSFKSSVTDEPAKPVTEEPEDEYEINTPTAFSSSGYSTPEPQNDFYDITTTSQPKPPIIF 410
TS + +++ KP P + + N ++ ++ + ND + TTS +
Sbjct: 168 TSNSTVTSNQFNKPTQNSPFNSFSNN------NNSFNNNQQANDIFGAPTTSAFTSQLNA 221
Query: 411 NPFPQSSPSPVKLDPIRPTQYRPSS 485
+PF Q++ S P Q PSS
Sbjct: 222 SPFSQNTSSN-SFTGSNPVQNNPSS 245
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,884,905
Number of Sequences: 5004
Number of extensions: 65442
Number of successful extensions: 328
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 323
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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