Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30132
         (453 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    58   1e-07
UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1; Gr...    34   1.6  
UniRef50_Q5YVF7 Cluster: Putative transporter; n=1; Nocardia far...    32   5.0  
UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12...    32   5.0  
UniRef50_UPI0000F1F786 Cluster: PREDICTED: hypothetical protein;...    32   6.6  
UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole...    32   6.6  
UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1...    32   6.6  
UniRef50_Q5NQX8 Cluster: Putative RTX family exoprotein; n=1; Zy...    31   8.7  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 57.6 bits (133), Expect = 1e-07
 Identities = 26/29 (89%), Positives = 28/29 (96%)
 Frame = +3

Query: 168 IYGTGGLLTPLVAPVLGFSSAGIAAGSTA 254
           IYGTGGLLTP+VAP+LGF SAGIAAGSTA
Sbjct: 17  IYGTGGLLTPIVAPMLGFGSAGIAAGSTA 45



 Score = 55.2 bits (127), Expect = 6e-07
 Identities = 25/41 (60%), Positives = 33/41 (80%)
 Frame = +2

Query: 218 FQLSGNSGRKHSPAAQAYYGNLVAGSIVSQLTAAAMVAPTP 340
           F  +G +    + AAQAYYGN+VAGS++SQLT+AAM+APTP
Sbjct: 34  FGSAGIAAGSTAAAAQAYYGNVVAGSVISQLTSAAMLAPTP 74


>UniRef50_Q0BU79 Cluster: Hypothetical cytosolic protein; n=1;
           Granulibacter bethesdensis CGDNIH1|Rep: Hypothetical
           cytosolic protein - Granulobacter bethesdensis (strain
           ATCC BAA-1260 / CGDNIH1)
          Length = 90

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 104 QKLKEHGA--SSCISGKRGRRCCNIWHWGSVDSISGSRAR 217
           Q L+EHG    S ++G+R  RC N WH G  D +   R R
Sbjct: 42  QALREHGTFQGSMLAGRRILRC-NPWHQGGYDPVPAGRCR 80


>UniRef50_Q5YVF7 Cluster: Putative transporter; n=1; Nocardia
           farcinica|Rep: Putative transporter - Nocardia farcinica
          Length = 392

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 23/49 (46%), Positives = 26/49 (53%)
 Frame = -1

Query: 336 VGATMAAAVNCDTMLPATKFP*YACAAGLCFLPLFPLS*NRAREPLMES 190
           VGAT+  AV  D   P    P  A AAGL  L +F L+   AREPL  S
Sbjct: 342 VGATLGGAV-VDAAGPGA-LPPIAAAAGLVALTVFGLAARAAREPLRAS 388


>UniRef50_P28618 Cluster: Pyrrolidone-carboxylate peptidase; n=12;
           Bacilli|Rep: Pyrrolidone-carboxylate peptidase -
           Bacillus subtilis
          Length = 215

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 83  LRIARREQKLKEHGASSCISGKRGRRCCNIWHWGSVDSIS 202
           L + R   K+KEHG  + +S   G   CN   +G +D IS
Sbjct: 117 LPVKRMTAKMKEHGIPAAVSYTAGTFVCNYLFYGLMDHIS 156


>UniRef50_UPI0000F1F786 Cluster: PREDICTED: hypothetical protein;
           n=6; Deuterostomia|Rep: PREDICTED: hypothetical protein
           - Danio rerio
          Length = 107

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 189 LTPLVAPVLGFSSAGIAAGSTA 254
           LTPL   + GF++AGI AGSTA
Sbjct: 25  LTPLALSMAGFTAAGITAGSTA 46


>UniRef50_Q4TGD5 Cluster: Chromosome undetermined SCAF3766, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF3766,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 328

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = -1

Query: 213 AREPLMESTDPQCHILQHRRPRLPLMQLE 127
           A +PL   T+P+  +LQ+RRP+L L  L+
Sbjct: 5   AEQPLSLRTEPKLRVLQYRRPKLELQLLK 33


>UniRef50_O44565 Cluster: Laminin related. see also lmb-protein 1;
            n=2; Caenorhabditis|Rep: Laminin related. see also
            lmb-protein 1 - Caenorhabditis elegans
          Length = 1067

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +2

Query: 131  SCISGKRGRRC--CNIWHWGSVDSISGSRARFQLSGN 235
            +C SG +G RC  C   HWGS   + G+  R   +GN
Sbjct: 973  NCKSGYQGERCGECAQNHWGSPREVGGTCERCDCNGN 1009


>UniRef50_Q5NQX8 Cluster: Putative RTX family exoprotein; n=1;
           Zymomonas mobilis|Rep: Putative RTX family exoprotein -
           Zymomonas mobilis
          Length = 2984

 Score = 31.5 bits (68), Expect = 8.7
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = +3

Query: 168 IYGTGGLLTPLVAPVLGFSSAGIAAGSTALLHKH 269
           IY   GLL PL+A +LG  +AG AA +    H H
Sbjct: 120 IYHDNGLLVPLLAGLLGAGAAGGAAAALTGGHSH 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 438,010,963
Number of Sequences: 1657284
Number of extensions: 8451127
Number of successful extensions: 22033
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22028
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)