Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30131
         (616 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    28   0.072
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.38 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.2  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 0.072
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 100 FLAIFSLFTPFLSTYIIEFKQRNFVICVILLKKNRNENFANKRQA 234
           F  +F++   +L+T ++   Q  FVI    L K   +NFA K Q+
Sbjct: 172 FFTVFNVAQCYLTTELVLMLQTRFVILNKQLTKITVKNFATKTQS 216


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 90  MRLVFSYIFFIYPF-FEYVYYRI*ATKFCYLCYIIKK 197
           ++LVF + +FIY F   Y+YY +         Y + K
Sbjct: 141 LQLVFVFCYFIYLFTVYYIYYSVHEASIINFGYTLAK 177


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 IEFKQRNFVICVILLKKNRN 207
           I+F+    ++ + L+KKNRN
Sbjct: 738 IDFQPSAVLLLIDLMKKNRN 757


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 IEFKQRNFVICVILLKKNRN 207
           I+F+    ++ + L+KKNRN
Sbjct: 738 IDFQPSAVLLLIDLMKKNRN 757


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 IEFKQRNFVICVILLKKNRN 207
           I+F+    ++ + L+KKNRN
Sbjct: 738 IDFQPSAVLLLIDLMKKNRN 757


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 IEFKQRNFVICVILLKKNRN 207
           I+F+    ++ + L+KKNRN
Sbjct: 738 IDFQPSAVLLLIDLMKKNRN 757


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,063
Number of Sequences: 336
Number of extensions: 2404
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)