Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30130
(569 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 140 3e-32
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 140 3e-32
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 133 2e-30
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 118 1e-25
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 118 1e-25
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 109 6e-23
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 105 6e-22
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 99 8e-20
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 94 2e-18
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 94 2e-18
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 92 7e-18
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 92 1e-17
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 91 1e-17
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 90 4e-17
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 87 3e-16
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 80 3e-14
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 80 4e-14
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 79 5e-14
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 73 6e-12
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 70 3e-11
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 67 2e-10
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 66 7e-10
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 65 1e-09
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 65 1e-09
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 62 1e-08
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 62 1e-08
UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648... 60 3e-08
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 58 2e-07
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 57 3e-07
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 56 6e-07
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 55 1e-06
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 53 4e-06
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 51 2e-05
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 49 9e-05
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 48 2e-04
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 46 5e-04
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 46 6e-04
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 46 8e-04
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 43 0.004
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 43 0.004
UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_UPI0000E48F3F Cluster: PREDICTED: similar to AML1-EVI-1... 33 3.6
UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1; ... 33 3.6
UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like pr... 33 3.6
UniRef50_A0NAP9 Cluster: ENSANGP00000018250; n=2; Anopheles gamb... 33 3.6
UniRef50_UPI000049883A Cluster: hypothetical protein 104.t00024;... 33 4.7
UniRef50_A4YMD1 Cluster: Putative DNA helicase related protein; ... 33 4.7
UniRef50_Q14395 Cluster: Mucin; n=1; Homo sapiens|Rep: Mucin - H... 33 4.7
UniRef50_UPI0000251DBE Cluster: mucin 6, gastric; n=2; Homo sapi... 33 6.2
UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;... 33 6.2
UniRef50_A7HCP6 Cluster: Histidine triad (HIT) protein; n=2; Ana... 33 6.2
UniRef50_A5FF29 Cluster: MATE efflux family protein; n=1; Flavob... 33 6.2
UniRef50_Q7QZY1 Cluster: GLP_23_43720_46137; n=1; Giardia lambli... 33 6.2
UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella ... 33 6.2
UniRef50_Q6W4X9 Cluster: Mucin-6 precursor; n=24; Tetrapoda|Rep:... 33 6.2
UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1... 32 8.2
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 140 bits (338), Expect = 3e-32
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 1e-15
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 140 bits (338), Expect = 3e-32
Identities = 67/87 (77%), Positives = 76/87 (87%), Gaps = 3/87 (3%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++KPGDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKPGDKVGAS 170
Query: 184 EATL---LNMLNISPFSYGLVVKQVYD 255
EATL LNMLNISPFSYGL+++QVYD
Sbjct: 171 EATLLNMLNMLNISPFSYGLIIQQVYD 197
Score = 78.2 bits (184), Expect = 1e-13
Identities = 34/86 (39%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G++++PE+LDI + L +F GV N+A++ L IGYPT+AS PH+I NG+K +L
Sbjct: 198 NGSVYSPEVLDITEDALHKRFLKGVRNIASVCLQIGYPTLASIPHTIINGYKRVLAVTVE 257
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K ++ DP+ FA AP
Sbjct: 258 TDYTFPLAEKVKAYLADPTAFAVAAP 283
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 133 bits (322), Expect = 2e-30
Identities = 62/85 (72%), Positives = 74/85 (87%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PA+ GAIAP+ V +PA NTGLGPEKTSFFQALSI TKIS+GTIEI+++VH++K G+KVGA
Sbjct: 110 PAKAGAIAPVDVFVPASNTGLGPEKTSFFQALSIATKISRGTIEILSEVHLIKIGEKVGA 169
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
SEATLL ML I PF+YGL + QVYD
Sbjct: 170 SEATLLQMLKIFPFTYGLKIVQVYD 194
Score = 98.3 bits (234), Expect = 1e-19
Identities = 47/86 (54%), Positives = 57/86 (66%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
SG++FAP ILDI +DL +F +G+ANVAA+SL IGYPT+AS PHSI NGFKNLL
Sbjct: 195 SGSVFAPSILDITEDDLIKQFMSGLANVAAVSLQIGYPTVASVPHSIVNGFKNLLAVAVA 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS FAA+ P
Sbjct: 255 TDITFKEAEQAKAFVADPSAFAALVP 280
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 118 bits (283), Expect = 1e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+
Sbjct: 112 PARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGS 171
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
SEA LL L I PFSYGLVV+ VYD
Sbjct: 172 SEAALLAKLGIRPFSYGLVVQSVYD 196
Score = 80.6 bits (190), Expect = 2e-14
Identities = 35/85 (41%), Positives = 52/85 (61%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G++F+PE+LD+ + L KF +G++ V +L+LA+ YPT+A+APH N +KN L
Sbjct: 197 NGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVA 256
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVA 509
KEF+KDPSKF A
Sbjct: 257 TDYTFPQAEKVKEFLKDPSKFVVAA 281
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 118 bits (283), Expect = 1e-25
Identities = 55/85 (64%), Positives = 66/85 (77%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR G +AP+ VV+ NTGL P +TSFFQ L+IPTKI+KGT+EII V ++K GDKVG+
Sbjct: 113 PARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGS 172
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
SEA LL L I PFSYGLVV+ VYD
Sbjct: 173 SEAALLAKLGIRPFSYGLVVESVYD 197
Score = 84.2 bits (199), Expect = 2e-15
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G++F PE+L++ +DL KF AGV+ + ALSLAI YPT+A+APH N +KN+L
Sbjct: 198 NGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALA 257
Query: 435 XXXXXXXXXXXKEFIKDPSKFA-AVA 509
KEF+KDP+KFA AVA
Sbjct: 258 TEYSFPQAENVKEFLKDPTKFAVAVA 283
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 109 bits (261), Expect = 6e-23
Identities = 51/85 (60%), Positives = 63/85 (74%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PA+ G AP V+IPA TG+ P +TSF Q L I TKI++G I+I+N+VHI+K G KVGA
Sbjct: 109 PAKAGVFAPNDVIIPAGPTGMEPTQTSFLQDLKIATKINRGQIDIVNEVHIIKTGQKVGA 168
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
SEATLL LNI PF+YGL K +YD
Sbjct: 169 SEATLLQKLNIKPFTYGLEPKIIYD 193
Score = 64.9 bits (151), Expect = 1e-09
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
+G ++P I + EDL KF+ G+ N+AA+SL IGYPT+AS PHS+ N FKNLL
Sbjct: 194 AGACYSPSISE---EDLINKFKQGIFNIAAISLEIGYPTVASIPHSVMNAFKNLL 245
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 105 bits (253), Expect = 6e-22
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR GAIAP V++PA NTG+ P+ TSFFQAL+I TKI+KGT+EI++D +L GD+V
Sbjct: 117 PARVGAIAPCDVIVPAGNTGMEPKATSFFQALNIATKIAKGTVEIVSDKKVLSVGDRVDN 176
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
S ATLL L+ISPF Y + V+ V+D
Sbjct: 177 STATLLQKLDISPFYYQVEVQSVWD 201
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/54 (44%), Positives = 31/54 (57%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
G +F E L I + + G++NVAALSL G PT A+ PH I + FK LL
Sbjct: 203 GMLFLREDLSITDDVVEKYLLEGISNVAALSLGAGIPTAATLPHMIMDAFKTLL 256
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 98.7 bits (235), Expect = 8e-20
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PA+ G IAP V++PA +TGL P +T+F QAL+I +KI+KG IEI ++ ++K G+KVG
Sbjct: 117 PAKAGVIAPNDVIVPAGDTGLDPTQTNFVQALNIASKITKGQIEITSETLLIKEGEKVGV 176
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
S+A LL L I+PF YG V+ VYD
Sbjct: 177 SQAVLLQKLKINPFKYGAVIDVVYD 201
Score = 47.2 bits (107), Expect = 3e-04
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
+G ++ + LD+ D+ KFQ GV A+SLA PT A+ PH + N F+ LL
Sbjct: 202 NGIVYDAKALDLTESDIVKKFQEGVQAATAISLAANLPTEAACPHLMLNAFQALL 256
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 94.3 bits (224), Expect = 2e-18
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR G++A V I A TGL P++T+FFQ L+IPTKI+K IEI D I+ G+KVG+
Sbjct: 128 PARVGSVAQCDVWIKAGGTGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGS 187
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
+EA LL LNI+PFSY L V V+D
Sbjct: 188 NEAALLQKLNINPFSYKLSVAHVFD 212
Score = 56.8 bits (131), Expect = 3e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
+G ++ P +LDI E + ++ ++NVA++SL G PT ASAPHSI FKNLL
Sbjct: 213 NGNVYGPGVLDITSESIIESYKRVISNVASVSLESGIPTRASAPHSIMRVFKNLL 267
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 93.9 bits (223), Expect = 2e-18
Identities = 46/85 (54%), Positives = 53/85 (62%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR GA+AP+ VVIP TG+ P FF AL IPTKI KG I+I D +LK G KVG
Sbjct: 128 PARVGAVAPIDVVIPPGPTGMDPASIQFFHALQIPTKIEKGQIQITKDFVVLKTGQKVGQ 187
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
S+A LL L PF YG+ V YD
Sbjct: 188 SQAVLLQKLGKKPFLYGMEVLACYD 212
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 416
+G+I + + + D+ AKFQ V NV+A+SL G+ ASAP+ +AN FK+L
Sbjct: 213 NGSILNKQQVSVNLNDIVAKFQQNVRNVSAISLQNGWVNEASAPYLLANAFKDL 266
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 92.3 bits (219), Expect = 7e-18
Identities = 47/85 (55%), Positives = 58/85 (68%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR G IAP+ V IP TG+ P TSF ++L I TKI KG IEI VH++K G+KV A
Sbjct: 111 PARLGVIAPIDVFIPPGPTGMDPSHTSFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTA 170
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
S ATLL N++P SYG+ V+ VYD
Sbjct: 171 SSATLLRKFNMNP-SYGVDVRTVYD 194
Score = 64.9 bits (151), Expect = 1e-09
Identities = 34/84 (40%), Positives = 46/84 (54%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXX 437
G I+ ++LDI ED+ KF GV+NVAALS A G T AS PH FKN++
Sbjct: 196 GVIYDAKVLDITDEDILEKFSKGVSNVAALSRATGVITEASYPHVFVEAFKNIVALIIDS 255
Query: 438 XXXXXXXXXXKEFIKDPSKFAAVA 509
K+++++P FAAVA
Sbjct: 256 DYTFPLMKILKKWVENPEAFAAVA 279
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 91.9 bits (218), Expect = 1e-17
Identities = 41/54 (75%), Positives = 49/54 (90%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
G+IF+P+ILDIKPEDLRAKFQ GVAN+A +SL IGYPT+AS PH+IA GF+NLL
Sbjct: 770 GSIFSPDILDIKPEDLRAKFQVGVANLAGVSLEIGYPTLASVPHNIAIGFRNLL 823
Score = 50.4 bits (115), Expect = 3e-05
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = +1
Query: 91 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL--NMLNISP 219
ALSIP KISKGTIEIINDV ILK GDK+ ++ ++L+I P
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKIEQVYGSIFSPDILDIKP 782
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 91.5 bits (217), Expect = 1e-17
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
A+ G IAP V + TG+ P +TSFFQAL I TKI KG I+I+N++H++ KVG S
Sbjct: 121 AKAGTIAPNDVHVYPGPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNS 180
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EA LL L + PFS+GL VK VYD
Sbjct: 181 EAVLLKKLGVKPFSFGLKVKNVYD 204
Score = 73.3 bits (172), Expect = 4e-12
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G++++ E+L + + L KF GV N+AA+SL +G PT ASAPHSI +GFKNL+
Sbjct: 205 NGSVYSAEVLKLTNDILLGKFMNGVRNIAAMSLTLGIPTAASAPHSIVSGFKNLVSIAHV 264
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAV 506
+KDPSK AA+
Sbjct: 265 VDYTFSQAEGLLAVLKDPSKLAAI 288
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 89.8 bits (213), Expect = 4e-17
Identities = 42/84 (50%), Positives = 58/84 (69%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
A+ G +A V + + TG+ P+KTS+FQAL I TKI+KG +EII+ +L GDKVG S
Sbjct: 133 AKVGNVAQRDVWVESCITGMTPDKTSYFQALGIATKITKGKVEIISPYKVLSEGDKVGPS 192
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
+A LL MLNI PF Y + + Q+Y+
Sbjct: 193 QANLLGMLNIKPFCYKMTMHQIYE 216
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLL 419
G I+ ++DI ED+ + ++ VAA SL G T AS P+++ N FK++L
Sbjct: 218 GVIYDSSLIDIGEEDIFTSLRNAISTVAAASLGAGVITQASMPYNVRNAFKDIL 271
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 87.0 bits (206), Expect = 3e-16
Identities = 42/85 (49%), Positives = 53/85 (62%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
PAR G +A V+IP TG+ P + +FF ALSI TKI KG IEI +V + G K+G
Sbjct: 128 PARVGTVAQKDVMIPPGPTGMDPSQINFFHALSISTKIQKGQIEITKEVQVCTKGKKIGN 187
Query: 181 SEATLLNMLNISPFSYGLVVKQVYD 255
SE +LL +NI PFSYG+ YD
Sbjct: 188 SEVSLLEKMNIQPFSYGMKCFSDYD 212
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/54 (42%), Positives = 29/54 (53%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNL 416
+G I E+L I P + F +AA+SLA GY T S PH I N FK+L
Sbjct: 213 NGEILTEEVLSISPSVILDAFAQNTLRIAAVSLATGYVTAPSVPHFIQNAFKDL 266
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 80.2 bits (189), Expect = 3e-14
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
A+ G +AP VVI T GP++ F+ AL I TKI+KG IEI+N V+++K GD V S
Sbjct: 112 AKAGIVAPADVVIEPMLTQSGPDQHGFYAALGIDTKINKGKIEIVNPVNLIKKGDIVTPS 171
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
ATLL L I PF Y + +YD
Sbjct: 172 HATLLQRLEIDPFFYAMSALNLYD 195
Score = 43.6 bits (98), Expect = 0.003
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXX 437
G I+ +L+I + AK+ AG+ +L+L +P + + PH + K+ +
Sbjct: 197 GEIYDAAVLEIDDSVMEAKWNAGLEAFVSLALGANFPCLPAIPHIFMDTAKSFIGAGVEA 256
Query: 438 XXXXXXXXXX-KEFIKDPSKFAAVAP 512
KE + DPSKFA AP
Sbjct: 257 DVTEIPLVKRVKEILADPSKFAVAAP 282
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/84 (45%), Positives = 51/84 (60%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
A+ GAIAP V++ T + P AL+I KI KGTIEI + ++ G KVGAS
Sbjct: 113 AKVGAIAPCDVILQPQRTSMSPNDIKILHALNIQCKIFKGTIEITGEKQLIWEGQKVGAS 172
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EA +LN+L I PF Y L ++ +YD
Sbjct: 173 EANILNILGIMPFKYTLKIEALYD 196
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/84 (35%), Positives = 43/84 (51%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXX 437
G ++ P IL I E L KF+ G+ NV L+LA+GYP ASAPH + + FK++
Sbjct: 198 GNMYDPSILAITEEVLGEKFRTGLRNVTGLALAVGYPCAASAPHLVGSAFKDIAAIAIAI 257
Query: 438 XXXXXXXXXXKEFIKDPSKFAAVA 509
++ + DP AA A
Sbjct: 258 EHNMKQIEDLQKLLSDPEALAAAA 281
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 79.4 bits (187), Expect = 5e-14
Identities = 35/85 (41%), Positives = 53/85 (62%)
Frame = -3
Query: 255 IIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*NFGRDGKSLEERG 76
++ L + +T+ EWR+VQ V++ FRS++ +T + D+ + D+FN T N G + +SLEER
Sbjct: 133 VVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEERS 192
Query: 75 FLWTEAGVVGGNDD*QWGNGTGTSW 1
W GV G N D WGN T + W
Sbjct: 193 LTWFHTGVDGENPDIFWGNSTSSGW 217
Score = 34.3 bits (75), Expect = 2.0
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -1
Query: 488 WVLNELLDGGSFFKLNLCDSSDGQKVLETIGDGMRG*SNSWVSNSQRKSSYISNSSLELG 309
WVLN +L +F+ + SD Q+VL + + WV++SQ +S +S E+
Sbjct: 55 WVLNSVLQFFNFWVDVVSSDSDSQQVLVVVDQRVTDRWQGWVTSSQGNTSNGVDSRDEVR 114
Query: 308 TEILWFDVQN 279
+ + D+Q+
Sbjct: 115 DQFIVSDIQD 124
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 72.5 bits (170), Expect = 6e-12
Identities = 35/94 (37%), Positives = 55/94 (58%)
Frame = +1
Query: 13 GAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEAT 192
G IA +++I L P +T FFQAL IPT+ISK +IEII D+ ++ + S+
Sbjct: 109 GEIAQRNIIIKKGIKNLSPSQTPFFQALGIPTRISKSSIEIIEDILLVSKNQALNKSQEV 168
Query: 193 LLNMLNISPFSYGLVVKQVYDLELFLHLKFWTSN 294
LL L+I P YG+ +K+++ + ++LK N
Sbjct: 169 LLKKLDIKPHKYGVKIKKIFSSKGEINLKILQMN 202
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 70.1 bits (164), Expect = 3e-11
Identities = 37/86 (43%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
PA+PGA+ P VV+PA T L P QAL IP +I KG + I D +LK G+ +
Sbjct: 111 PAKPGAVVPKDVVVPAGPTPLAPGPIVGQMQALGIPARIEKGKVTIQKDTTVLKAGEVIT 170
Query: 178 ASEATLLNMLNISPFSYGLVVKQVYD 255
A +LN L I P GL V VY+
Sbjct: 171 PELANILNALGIQPLEVGLDVLAVYE 196
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 67.3 bits (157), Expect = 2e-10
Identities = 34/84 (40%), Positives = 49/84 (58%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
A+ G +A V + T + P+ FQ+L+IPTKI KG IEII + +L+ G K+ +
Sbjct: 110 AKIGQVAQSDVYLSQGLTNISPDGIGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEA 169
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLL LNI PF + + Y+
Sbjct: 170 EATLLQKLNILPFYNEIKIISFYE 193
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 65.7 bits (153), Expect = 7e-10
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
AR G IA +V+PA NTG+ P S F L IPT++ +G+I I D + KPGD +
Sbjct: 116 ARAGDIATSEIVLPAGNTGIPPGPMISNFNKLGIPTRVQEGSIWIAKDTVVAKPGDVISP 175
Query: 181 SEATLLNMLNISPFSYGLVVKQVY 252
A LL+ L + P L +K +Y
Sbjct: 176 ELAELLSKLGLKPIESKLQIKTIY 199
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 65.3 bits (152), Expect = 1e-09
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
PA+PG +A +V+PA +TGL P S F L I T + GTI I D + KPGD +
Sbjct: 119 PAKPGDVAQSEIVVPAGDTGLTPGPILSTFGKLKIKTMVKGGTIHIAKDTVVAKPGDVIS 178
Query: 178 ASEATLLNMLNISPFSYGLVVKQVY 252
A+LL L I+P + +K Y
Sbjct: 179 PELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
A+PG + +++PA NTG+ P S F L IPT+I G I + D + KPGD V
Sbjct: 122 AKPGDVLQSDIIVPAGNTGINPGPVLSRFSKLKIPTQIRDGKIWVARDTQVAKPGDTVTP 181
Query: 181 SEATLLNMLNISPFSYGLVVKQV 249
A LL ++N+ P L VK V
Sbjct: 182 ELADLLRLINVKPVYESLKVKAV 204
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/84 (40%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 RPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
+PG IA +VIP NTGL P S F L IPT+I +I I D + KPGD +
Sbjct: 115 KPGEIAQQEIVIPEGNTGLSPGPILSTFSKLKIPTRIQGNSIVITRDTVVAKPGDTISEE 174
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
A+LL L+I+ + +K YD
Sbjct: 175 LASLLQRLDIALKEVKINIKAAYD 198
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/74 (47%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
AR G IA + V +PA NTG+ GP T F +A IPTKI +GTI I+ D +K G+ +G
Sbjct: 97 ARAGDIASIDVTVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWILKDTTPVKKGEPIG 155
Query: 178 ASEATLLNMLNISP 219
A LL L+I P
Sbjct: 156 DKLAPLLGKLDIKP 169
>UniRef50_A6NF45 Cluster: Uncharacterized protein ENSP00000366648;
n=12; Gnathostomata|Rep: Uncharacterized protein
ENSP00000366648 - Homo sapiens (Human)
Length = 99
Score = 60.5 bits (140), Expect = 3e-08
Identities = 29/62 (46%), Positives = 35/62 (56%)
Frame = +3
Query: 327 VANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKFAAV 506
V NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F A
Sbjct: 1 VRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVAA 60
Query: 507 AP 512
AP
Sbjct: 61 AP 62
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
AR G IA + VV+PA NTG+ GP T F +A IPTKI +GTI I D + G+ +
Sbjct: 111 ARGGDIASVDVVVPAKNTGIAPGPMLTEFKEA-GIPTKIDQGTIWIAKDSTPVLKGEAIN 169
Query: 178 ASEATLLNMLNISPFSYGLVV 240
A +L L+I P G+ +
Sbjct: 170 EKLAAILGKLDIKPVEAGITL 190
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 57.2 bits (132), Expect = 3e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKT-SFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
PA+ G+IAP +V+PA +T P Q + IP KI KG+I + +D I+ G+++
Sbjct: 106 PAKAGSIAPADIVVPAGDTSFPPGPILGELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIP 165
Query: 178 ASEATLLNMLNISPFSYGL 234
+ A +L L I P G+
Sbjct: 166 KAVADILTKLEIHPMEVGI 184
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 56.0 bits (129), Expect = 6e-07
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
P + GAIAP + + + +TG+ P S +A+ IP I KG I I D + K GD +
Sbjct: 116 PIKGGAIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVIS 175
Query: 178 ASEATLLNMLNISPFSYGLVVKQVYD 255
A +L+ L I P + GL V VY+
Sbjct: 176 PKLAVVLSALGIKPVTVGLNVLGVYE 201
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 54.8 bits (126), Expect = 1e-06
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
A PG A VVIPA +TG+ GP S F L + TK+ G + ++ D + KPGD +
Sbjct: 115 AMPGDKAEEEVVIPAGDTGMPAGPI-LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIP 173
Query: 178 ASEATLLNMLNISPFSYGLVVKQVY 252
A +L L I P L +K Y
Sbjct: 174 AEALPILQKLGIMPVYVKLKIKVAY 198
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 53.2 bits (122), Expect = 4e-06
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGL--GPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKV 174
P + G IAP +VIP T + GP +T +AL + TK++ G IEI+ D ++K G+ V
Sbjct: 105 PIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVTSGKIEIVEDAVVVKEGEIV 163
Query: 175 GASEATLLNMLNISP 219
A +L L I P
Sbjct: 164 SPKVANVLQTLGIKP 178
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
PA+PG IAP +V+P T P S Q +P +I G + I D ++K G+++
Sbjct: 122 PAKPGDIAPEDIVVPEGPTPFEPGPIVSELQQAGLPAQIQDGKVVITKDTVLVKEGEEID 181
Query: 178 ASEATLLNMLNISPFSYGL-VVKQVYDLELF 267
A +L L I P G+ +V V + LF
Sbjct: 182 EKTAEILKKLEIEPMEVGVDIVAIVAEGTLF 212
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 48.8 bits (111), Expect = 9e-05
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
A+PG AP +V+PA T P S F L IPT++ +G I I D + K G ++
Sbjct: 119 AQPGDKAPFDIVVPAGPTNASPGPIISKFGKLKIPTRVQEGKIWIAKDTVVAKAGQEITP 178
Query: 181 SEATLLNMLNISP 219
A +L ++ I P
Sbjct: 179 EMAEVLRVVGIEP 191
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
P G +AP +V+P +TG+ P Q + +I +G+I++++D + + G+ V
Sbjct: 113 PINAGEVAPNDIVVPEGDTGIDPGPFVGELQTIGANARIQEGSIQVLDDSVVTEEGETVS 172
Query: 178 ASEATLLNMLNISPFSYGLVVKQVY 252
+ +L+ L I P GL ++ V+
Sbjct: 173 DDVSNVLSELGIEPKEVGLDLRGVF 197
Score = 41.5 bits (93), Expect = 0.013
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 258 GTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANG 404
G +F PE L+I ++ RA Q+ A+ LS+ YPT +AP IA G
Sbjct: 200 GVLFTPEELEIDVDEYRADIQSAAASARNLSVNAAYPTERTAPDLIAKG 248
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 46.4 bits (105), Expect = 5e-04
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
A+ G IAP +VIP T P FQ + IP I G + I + ++K G+K+ A
Sbjct: 117 AKGGDIAPSDIVIPKGPTSFKPGPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISA 176
Query: 181 SEATLLNMLNISPFSYGL 234
A L L I P GL
Sbjct: 177 KLAEALTRLEIMPIDVGL 194
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
P + GA+AP+ +V+ + T P Q+ IP I G + I V + K GD +
Sbjct: 112 PIKAGAVAPVDIVVESGETSFSPGPMVGKLQSAGIPAAIKGGKVVINQRVVLAKQGDVIT 171
Query: 178 ASEATLLNMLNISPFSYGLVVKQVY 252
A +L ++ I P GL ++ Y
Sbjct: 172 PKVAEVLKLMEIYPKLVGLELRAAY 196
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 45.6 bits (103), Expect = 8e-04
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEK-TSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
A+PG AP +VIP T P Q + IP I G ++I ++K G+ +
Sbjct: 110 AKPGETAPEDIVIPKGPTSFKPGPIVGELQQVGIPAAIEGGKVKIRETKTVVKKGEVINK 169
Query: 181 SEATLLNMLNISPFSYGLVVKQVY 252
A L L + P GL+++ Y
Sbjct: 170 KVAEALVKLGVKPMDVGLILQAAY 193
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 43.2 bits (97), Expect = 0.004
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGP-EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVG 177
P + GA+AP+ +VI T L P Q L IP+ I G + + ++ G+ V
Sbjct: 107 PIKAGAVAPIDIVIEEGPTSLRPGPVVGELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVS 166
Query: 178 ASEATLLNMLNISPFSYGLVVKQVYD 255
A +L L I P + GL + VYD
Sbjct: 167 PELADMLAKLEIYPITEGLDLCAVYD 192
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 43.2 bits (97), Expect = 0.004
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = -1
Query: 128 IVPFEILVGMERAWKKEVFSGPRPVLWAGMTTDNGAMAPGRA 3
+VP ILVG +AWKKEV G PVL A +GA AP A
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALA 42
>UniRef50_A4CKK3 Cluster: Putative uncharacterized protein; n=1;
Robiginitalea biformata HTCC2501|Rep: Putative
uncharacterized protein - Robiginitalea biformata
HTCC2501
Length = 468
Score = 33.9 bits (74), Expect = 2.7
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 412 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPDHIPA 242
FL L E GAE + GY IA PAW ++ ++ L+ + GA+ PD A
Sbjct: 280 FLMRLMSEFGAEILAGYTIAIRVLMFTLMPAWGMSNAAATLVGQNLGAR-KPDRAEA 335
>UniRef50_UPI0000E48F3F Cluster: PREDICTED: similar to AML1-EVI-1
fusion protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to AML1-EVI-1 fusion protein -
Strongylocentrotus purpuratus
Length = 1723
Score = 33.5 bits (73), Expect = 3.6
Identities = 20/66 (30%), Positives = 28/66 (42%)
Frame = +2
Query: 8 VPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*SPVTRLELLK 187
VP+PLPH FPP + F LP Q L S+ MY+ +P ++ +
Sbjct: 1371 VPIPLPH----FPPIPKMDFYAANKNLMKFRGLPAHQAYALSSTMMYSGSTPSDKMVIRS 1426
Query: 188 PPFSTC 205
TC
Sbjct: 1427 KDRYTC 1432
>UniRef50_UPI000023E460 Cluster: hypothetical protein FG04875.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG04875.1 - Gibberella zeae PH-1
Length = 506
Score = 33.5 bits (73), Expect = 3.6
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = -1
Query: 254 SYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLMISIVPFEI-LVGMERAWKKE 78
+Y LT YE GE +N SEA LSP +++ + + +I + A K
Sbjct: 185 NYITLTAEAYEKGETYNPPPLDGSEASNLSPSYRIAARIPDKLPQAQIDRLNAMAAQKAA 244
Query: 77 VFSGPRPVLWAGMTTDNGAMAPGR 6
V S P + A + G + PGR
Sbjct: 245 VASDPSIQVLA-LPFRKGEIVPGR 267
>UniRef50_A4T4R5 Cluster: Putative outer membrane adhesin like
protein precursor; n=1; Mycobacterium gilvum
PYR-GCK|Rep: Putative outer membrane adhesin like
protein precursor - Mycobacterium gilvum PYR-GCK
Length = 567
Score = 33.5 bits (73), Expect = 3.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -3
Query: 108 GRDGKSLEERGFLWTEAGVVGGNDD*QWGNGTGTS 4
GR G + RGF+W G + D WG+ GTS
Sbjct: 488 GRGGSQMAARGFVWRTDGNLQNGDIVVWGSSAGTS 522
>UniRef50_A0NAP9 Cluster: ENSANGP00000018250; n=2; Anopheles gambiae
str. PEST|Rep: ENSANGP00000018250 - Anopheles gambiae
str. PEST
Length = 171
Score = 33.5 bits (73), Expect = 3.6
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = -1
Query: 314 LGTEILWFDVQNFRCKNSSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSLM 135
LG + W + + R +S + L T Y N E++ ++R +AP P F S +
Sbjct: 98 LGCDPCWGLIPHGRFADSFECVSALPTPKYANDEVYQIMRHCWKQAPQERPSFVELCSRL 157
Query: 134 ISIVPFEIL 108
++P +L
Sbjct: 158 NCLIPRSML 166
>UniRef50_UPI000049883A Cluster: hypothetical protein 104.t00024;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 104.t00024 - Entamoeba histolytica HM-1:IMSS
Length = 148
Score = 33.1 bits (72), Expect = 4.7
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Frame = -1
Query: 446 LNLCDSS--DGQKVLETIGDGMRG*SNSWVSNSQRKSSYISNSSLELGTEILWFDVQN 279
LN C++ + + +E GD + N+ + S+ +S+IS S EL +I W QN
Sbjct: 15 LNQCNNEIQEIDRKMEETGDSLEVIKNTMIQQSKMMNSFISEKSFELTKKIQWNGNQN 72
>UniRef50_A4YMD1 Cluster: Putative DNA helicase related protein;
n=2; Bradyrhizobium|Rep: Putative DNA helicase related
protein - Bradyrhizobium sp. (strain ORS278)
Length = 1609
Score = 33.1 bits (72), Expect = 4.7
Identities = 20/75 (26%), Positives = 31/75 (41%)
Frame = -2
Query: 412 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAKIVPDHIPA*QQ 233
F KP A + + + ++ E + NL R SGL I ++ P IP Q
Sbjct: 736 FAKPFANDETRQHLAQLTLSSEDRQAIDDFKANLVRMGSGLQRLIDFLQLDPSRIPLNQS 795
Query: 232 DHMRMERCSTC*EGW 188
D +R+E + W
Sbjct: 796 DQLRLESLAQTLSEW 810
>UniRef50_Q14395 Cluster: Mucin; n=1; Homo sapiens|Rep: Mucin - Homo
sapiens (Human)
Length = 505
Score = 33.1 bits (72), Expect = 4.7
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 PLPHCQS--SFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLK 187
P+ H S S P TP + P S S +K++T Y + S P T L
Sbjct: 276 PVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHPQTTLTTHV 335
Query: 188 PPFSTC*TSLHSHMVL 235
PPFST + +H V+
Sbjct: 336 PPFSTSSVTPSTHTVI 351
>UniRef50_UPI0000251DBE Cluster: mucin 6, gastric; n=2; Homo
sapiens|Rep: mucin 6, gastric - Homo sapiens
Length = 2439
Score = 32.7 bits (71), Expect = 6.2
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 11 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLK 187
PV + +S P P + P S F S K++T Y + S P T L
Sbjct: 1557 PVAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHV 1616
Query: 188 PPFSTC*TSLHSHMVL 235
PPFST + +H V+
Sbjct: 1617 PPFSTSLVTPSTHTVI 1632
>UniRef50_Q84CM8 Cluster: Putative fimbrial adhesin protein; n=3;
Enterobacteriaceae|Rep: Putative fimbrial adhesin
protein - Escherichia coli
Length = 174
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/72 (33%), Positives = 33/72 (45%)
Frame = +1
Query: 19 IAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 198
+ PLS A T LGP+ T L KIS+G E++ D + G V +
Sbjct: 10 LLPLSFSSFAATTDLGPKGT-----LKFTLKISQGACELVKDSVEVDMGTAVLKKPVRIG 64
Query: 199 NMLNISPFSYGL 234
+N +PFS GL
Sbjct: 65 TEINPTPFSIGL 76
>UniRef50_A7HCP6 Cluster: Histidine triad (HIT) protein; n=2;
Anaeromyxobacter|Rep: Histidine triad (HIT) protein -
Anaeromyxobacter sp. Fw109-5
Length = 164
Score = 32.7 bits (71), Expect = 6.2
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -1
Query: 290 DVQNFRCKNSSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSP 162
D QN S R++TCL PY +G + + R +E L+P
Sbjct: 35 DRQNLLVHRSGRAFTCLNRYPYNSGHVMVIPRAHVAELGALAP 77
>UniRef50_A5FF29 Cluster: MATE efflux family protein; n=1;
Flavobacterium johnsoniae UW101|Rep: MATE efflux family
protein - Flavobacterium johnsoniae UW101
Length = 468
Score = 32.7 bits (71), Expect = 6.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -2
Query: 412 FLKPLAMECGAEAIVGYPIAKERAATLATPAWNLARRSSGLMSRISGAK 266
F+ + G A+ GY IA+ A+ + TPAW + + L + GA+
Sbjct: 280 FMIKIVSHFGGNALAGYIIAQRVASIVTTPAWGIGNAAGILTGQNLGAQ 328
>UniRef50_Q7QZY1 Cluster: GLP_23_43720_46137; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_23_43720_46137 - Giardia lamblia
ATCC 50803
Length = 805
Score = 32.7 bits (71), Expect = 6.2
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 23 PHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*SPVTRLELLKP-PFS 199
P Q PTT ++ +L P+ FQR + M S S V+R+ELL P P +
Sbjct: 722 PQVQRELVPTTTQPKIAAHVTRRLEPNEDNFQRAIAVPDAMAGSTSEVSRIELLGPVPMA 781
Query: 200 T 202
T
Sbjct: 782 T 782
>UniRef50_Q5KPR7 Cluster: Expressed protein; n=1; Filobasidiella
neoformans|Rep: Expressed protein - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 545
Score = 32.7 bits (71), Expect = 6.2
Identities = 16/68 (23%), Positives = 36/68 (52%)
Frame = +1
Query: 1 PARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGA 180
P++PGA+ L ++ + G P +F+ + S+PT +I++ H+L + +
Sbjct: 264 PSQPGALPALPTLLAPNPDGSKPMLVNFYPSGSVPTTPVTFASQILSSNHVLLGRNLAAS 323
Query: 181 SEATLLNM 204
S A ++++
Sbjct: 324 SGARVISI 331
>UniRef50_Q6W4X9 Cluster: Mucin-6 precursor; n=24; Tetrapoda|Rep:
Mucin-6 precursor - Homo sapiens (Human)
Length = 2392
Score = 32.7 bits (71), Expect = 6.2
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 PLPHCQS--SFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLK 187
P+ H S S P P + P S F S K++T Y + S P T L
Sbjct: 1556 PMAHTNSATSSRPPPPFTTHSPPTGSSPFSSTGPMTATSFKTTTTYPTPSHPQTTLPTHV 1615
Query: 188 PPFSTC*TSLHSHMVL 235
PPFST + +H V+
Sbjct: 1616 PPFSTSLVTPSTHTVI 1631
>UniRef50_A6GTP1 Cluster: Putative transcriptional regulator; n=1;
Limnobacter sp. MED105|Rep: Putative transcriptional
regulator - Limnobacter sp. MED105
Length = 220
Score = 32.3 bits (70), Expect = 8.2
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 55 TGLGP--EKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNML 207
T +GP EK +FF+ I + S TIE +ND K GDK G L N++
Sbjct: 133 TSVGPVGEKVAFFRNSFI--EASAKTIEELNDPTKAKNGDKAGIQSVALANIM 183
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 562,262,229
Number of Sequences: 1657284
Number of extensions: 11765308
Number of successful extensions: 34432
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 32961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34389
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38738010471
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -