Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30130
(569 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 3.2
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.2
EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine hydroxy... 21 5.6
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 5.6
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.4
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.4
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.4
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.4
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.4
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.4
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.4
AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2 ... 21 9.8
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.2 bits (45), Expect = 3.2
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 20 LPHCQSSFPPTTPASVQRK-PLSSKLFPSLPKFQRVLLKSSTMYTS 154
+P Q + P Q K PLSS +PS+ ++L+ S M S
Sbjct: 1 MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASHLMAAS 46
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 4.2
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -1
Query: 290 DVQNFRCKNSSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSP 162
D+ N RC + S + + R M + + PTLSP
Sbjct: 78 DLPNSRCNSRESSDSLVQPRCPSGESMLSERAALLRGVPTLSP 120
>EF592178-1|ABQ95974.1| 532|Tribolium castaneum tyrosine
hydroxylase protein.
Length = 532
Score = 21.4 bits (43), Expect = 5.6
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Frame = -1
Query: 332 SNSSLELGTEILWFDVQNFRCKNSS--RSYTCLTTRPYENGEMFNMLRRVASEAPTLSP 162
S++ +E + + WF V+ CK S ++Y Y GE+ + L S+ P L P
Sbjct: 389 SDAEIEKLSTVYWFTVEFGLCKESGVVKAYGAGLLSAY--GELLHAL----SDKPELRP 441
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 5.6
Identities = 13/50 (26%), Positives = 27/50 (54%)
Frame = -3
Query: 306 GDPLV*CPEFQVQK*FQIIYLLNNKTI*EWRDVQHVEKGGFRSSNLVTGL 157
GDP V E + +K I++ +NNK + D ++ + ++ +++GL
Sbjct: 811 GDPAVLQCEAKGEKPIGILWNINNKRLEPKGDNRYTIREEILANGVLSGL 860
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 85 LSTPSNSNATKSSGLTSPLS 104
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.4
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 334 LATPAWNLARRSSGLMSRIS 275
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AJ223614-1|CAA11490.1| 301|Tribolium castaneum orthodenticle-2
protein protein.
Length = 301
Score = 20.6 bits (41), Expect = 9.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 30 QWGNGTGTSW 1
Q+GNG TSW
Sbjct: 274 QFGNGLETSW 283
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,096
Number of Sequences: 336
Number of extensions: 2953
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14099535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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