Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30130
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 140 4e-33
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 140 4e-33
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 140 4e-33
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 140 4e-33
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 140 4e-33
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 136 4e-32
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 85 2e-16
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 75 1e-13
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 75 1e-13
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 63 8e-10
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 33 0.71
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 32 1.6
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.9
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.9
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.9
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.9
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.9
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 30 5.0
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 83.0 bits (196), Expect = 7e-16
Identities = 39/86 (45%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG++ +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 79.8 bits (188), Expect = 6e-15
Identities = 38/86 (44%), Positives = 50/86 (58%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LD E L ++F GV NVA++ L GYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDKTEETLHSRFLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAENVKAFLADPSAFVAAAP 280
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 140 bits (338), Expect = 4e-33
Identities = 65/84 (77%), Positives = 75/84 (89%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 136 bits (330), Expect = 4e-32
Identities = 64/84 (76%), Positives = 74/84 (88%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGAS 183
AR GAIAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGAS
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGAS 170
Query: 184 EATLLNMLNISPFSYGLVVKQVYD 255
EATLLNMLNISPFS+GLV++QV+D
Sbjct: 171 EATLLNMLNISPFSFGLVIQQVFD 194
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 195 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 254
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 255 TDYTFPLAEKVKAFLADPSAFVAAAP 280
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 84.6 bits (200), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%)
Frame = +3
Query: 255 SGTIFAPEILDIKPEDLRAKFQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXX 434
+G+I+ PE+LDI E L ++F GV NVA++ L IGYPT+AS PHSI NG+K +L
Sbjct: 35 NGSIYNPEVLDITEETLHSRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVE 94
Query: 435 XXXXXXXXXXXKEFIKDPSKFAAVAP 512
K F+ DPS F A AP
Sbjct: 95 TDYTFPLAEKVKAFLADPSAFVAAAP 120
Score = 62.9 bits (146), Expect = 8e-10
Identities = 28/33 (84%), Positives = 32/33 (96%)
Frame = +1
Query: 157 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYD 255
K GDKVGASEATLLNMLNISPFS+GLV++QV+D
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFD 34
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 75.4 bits (177), Expect = 1e-13
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 138
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 111 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 62.9 bits (146), Expect = 8e-10
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +3
Query: 324 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKFAA 503
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F A
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 215
Query: 504 VAP 512
AP
Sbjct: 216 AAP 218
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 75.4 bits (177), Expect = 1e-13
Identities = 35/45 (77%), Positives = 38/45 (84%)
Frame = +1
Query: 4 ARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 138
AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 110 ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 62.9 bits (146), Expect = 8e-10
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +3
Query: 324 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKFAA 503
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F A
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 214
Query: 504 VAP 512
AP
Sbjct: 215 AAP 217
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 62.9 bits (146), Expect = 8e-10
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +3
Query: 324 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPSKFAA 503
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS F A
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFVA 60
Query: 504 VAP 512
AP
Sbjct: 61 AAP 63
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 33.1 bits (72), Expect = 0.71
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
Frame = +2
Query: 17 PLPHCQS--SFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLK 187
P+ H S S P TP + P S S +K++T Y + S P T L
Sbjct: 276 PVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHPQTTLTTHV 335
Query: 188 PPFSTC*TSLHSHMVL 235
PPFST + +H V+
Sbjct: 336 PPFSTSSVTPSTHTVI 351
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 31.9 bits (69), Expect = 1.6
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -1
Query: 341 SYISNSSLELGTEILWFDVQNFRCKNSSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSP 162
S++ +S+L G+ I + +++S + L T Y G +F + +AS +PTL P
Sbjct: 218 SHVWSSTLPAGSSI-----GTYHNNMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 161 GFKMCTSL 138
G +S+
Sbjct: 273 GLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 263 SSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 138
+++S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 274 TTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 263 SSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 138
+++S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 239 TTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 263 SSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 138
+++S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 239 TTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 263 SSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 138
+++S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 239 TTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.1 bits (67), Expect = 2.9
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 263 SSRSYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 138
+++S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 239 TTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 30.3 bits (65), Expect = 5.0
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Frame = +2
Query: 11 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLK 187
PV SS TP + P S F S +++T Y + S P T L
Sbjct: 88 PVAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHV 147
Query: 188 PPFSTC*TSLHSHMVLL 238
PPFST + +H V++
Sbjct: 148 PPFSTSLVTPSTHTVII 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,779,592
Number of Sequences: 237096
Number of extensions: 1888829
Number of successful extensions: 4603
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4598
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -