Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30129
         (782 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011174-1|AAR88535.1|  669|Drosophila melanogaster RH24371p pro...    34   0.19 
AE014296-3355|AAF51591.1|  669|Drosophila melanogaster CG13248-P...    34   0.19 
AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA...    30   3.1  
M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.    29   5.4  
BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p pro...    29   5.4  
AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB...    29   5.4  
AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA...    29   5.4  

>BT011174-1|AAR88535.1|  669|Drosophila melanogaster RH24371p
           protein.
          Length = 669

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 269 LYLKMKATSPNGQIPEEWGPKDLSWSKYLASVG 367
           L + +   +P   +PE +G  +LSW+KYL S+G
Sbjct: 294 LMIPISEINPAASLPEAFGQLNLSWAKYLISIG 326


>AE014296-3355|AAF51591.1|  669|Drosophila melanogaster CG13248-PA
           protein.
          Length = 669

 Score = 34.3 bits (75), Expect = 0.19
 Identities = 13/33 (39%), Positives = 21/33 (63%)
 Frame = +2

Query: 269 LYLKMKATSPNGQIPEEWGPKDLSWSKYLASVG 367
           L + +   +P   +PE +G  +LSW+KYL S+G
Sbjct: 294 LMIPISEINPAASLPEAFGQLNLSWAKYLISIG 326


>AE014296-3238|AAF49100.3| 1736|Drosophila melanogaster CG8334-PA
           protein.
          Length = 1736

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 19/59 (32%), Positives = 27/59 (45%)
 Frame = +2

Query: 188 LQTKHRDRRSDHTPLIRRETLSLLSDDLYLKMKATSPNGQIPEEWGPKDLSWSKYLASV 364
           L+ K  D R  H P +    + L  D + LK      N Q+  E   KDL+W + L S+
Sbjct: 587 LRLKSEDIRLWHVPQLDNGAILLEEDAMCLKELLIRDNDQLLLEIRNKDLTWPEELGSL 645


>M57496-1|AAA28983.1|  993|Drosophila melanogaster teashirt protein.
          Length = 993

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 150 NITATASGLNCRLCKQNIETAEATILHLLDEKH 248
           N    +S   C  CKQ+  T EA   H+ D KH
Sbjct: 346 NKGVASSVFRCVWCKQSFPTLEALTTHMKDSKH 378


>BT015201-1|AAT94430.1|  683|Drosophila melanogaster RE67261p
           protein.
          Length = 683

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 150 NITATASGLNCRLCKQNIETAEATILHLLDEKH 248
           N    +S   C  CKQ+  T EA   H+ D KH
Sbjct: 75  NKGVASSVFRCVWCKQSFPTLEALTTHMKDSKH 107


>AE014134-3546|AAS64735.1|  885|Drosophila melanogaster CG1374-PB,
           isoform B protein.
          Length = 885

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 150 NITATASGLNCRLCKQNIETAEATILHLLDEKH 248
           N    +S   C  CKQ+  T EA   H+ D KH
Sbjct: 277 NKGVASSVFRCVWCKQSFPTLEALTTHMKDSKH 309


>AE014134-3545|AAF57236.2|  954|Drosophila melanogaster CG1374-PA,
           isoform A protein.
          Length = 954

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +3

Query: 150 NITATASGLNCRLCKQNIETAEATILHLLDEKH 248
           N    +S   C  CKQ+  T EA   H+ D KH
Sbjct: 346 NKGVASSVFRCVWCKQSFPTLEALTTHMKDSKH 378


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,819,612
Number of Sequences: 53049
Number of extensions: 770282
Number of successful extensions: 2268
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2268
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)