Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30128
(730 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical pr... 45 6e-05
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 39 0.004
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 37 0.013
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 37 0.013
Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical pr... 34 0.12
U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical pr... 34 0.12
U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich ... 31 0.84
AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related... 31 0.84
Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical pr... 31 1.1
U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC006661-2|AAK31542.1| 253|Caenorhabditis elegans Spliceosome-a... 30 1.5
U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical p... 29 2.6
U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical p... 29 2.6
U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical p... 29 2.6
Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical p... 29 4.5
Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81531-3|CAB04315.1| 381|Caenorhabditis elegans Hypothetical pr... 28 5.9
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 28 5.9
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 28 5.9
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 28 5.9
AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical ... 28 5.9
AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical ... 28 5.9
>U97009-9|AAC69027.1| 225|Caenorhabditis elegans Hypothetical
protein T19H12.2 protein.
Length = 225
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Frame = +1
Query: 268 GLTTLKGFPTLPMLRKLELSDNRISNGLTF--LSGC-KKLAHLNLSGNK--IKDLETLKP 432
GLTTLKG P LP L L+LSDN + + +F L C ++ + LSGN+ + ++ TLK
Sbjct: 49 GLTTLKGMPVLPALNYLDLSDNELGDDASFDVLIKCAPEIKKITLSGNRLTLDNVRTLKM 108
Query: 433 L 435
L
Sbjct: 109 L 109
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2
Query: 125 MEKRIILERRGRDPSQVKELNLDNCRSTNIVGLTDEYTNLQIL 253
ME+ E RGR+P V L LDN + I G+ ++ T L++L
Sbjct: 1 MEEVYASELRGREPETVDTLFLDNTQGGVIGGINEKLTKLELL 43
>Z81526-2|CAB04265.1| 229|Caenorhabditis elegans Hypothetical
protein F33H2.3 protein.
Length = 229
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 268 GLTTLKGFPTLPMLRKLELSDNRISNGLTF---LSGCKKLAHLNLSGNKIKDLETLKPLE 438
GLTTL GFPTLP L L++SDN++ + +F + L + L+ NK+ L+ L+ L+
Sbjct: 52 GLTTLAGFPTLPALTYLDISDNQLGDNASFDVLVKNAPDLKKITLASNKL-SLDNLRCLK 110
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +2
Query: 122 NMEKRIILERRGRDPSQVKELNLDNCRSTNIVGLTDEYTNLQIL 253
+M + + E R RDP+ V L LDN I GLTD+ NL++L
Sbjct: 3 SMAEIYVKELRERDPATVDTLFLDNAEDGQIGGLTDQLINLEML 46
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +1
Query: 211 HSWFNR*IYKFTNTDLNNVGLTTL--KGFPTLPMLRKLELSDNRI--SNGLTFLSGCKKL 378
HS+ R + +N GL ++ K F TLP L+ L+LSDN + +G FL C ++
Sbjct: 778 HSFIGR--LRLQRLHINGTGLRSIQPKAFHTLPALKTLDLSDNSLISLSGEEFLK-CGEV 834
Query: 379 AHLNLSGNKIKDL 417
+ L L+GN+ L
Sbjct: 835 SQLFLNGNRFSTL 847
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 247 NTDLNNVGLTTLKGFPTLPMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSGN--KIKDL 417
+ L+N G+T + L L++S+NR++ G T L+ +L LNL GN +
Sbjct: 570 SVSLSNNGITIMNADQIPNSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVAT 629
Query: 418 ETLKPLEA 441
E++K +EA
Sbjct: 630 ESMKVVEA 637
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +1
Query: 211 HSWFNR*IYKFTNTDLNNVGLTTLK--GFPTLPMLRKLELSDNRI--SNGLTFLSGCKKL 378
HS+ R + +N GL +++ F TLP L+ L+LSDN + +G FL C ++
Sbjct: 778 HSFIGR--LRLQRLHINGTGLRSIQPMAFHTLPALKTLDLSDNSLISLSGEEFLK-CGEV 834
Query: 379 AHLNLSGNKIKDL 417
+ L L+GN+ L
Sbjct: 835 SQLFLNGNRFSTL 847
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = +1
Query: 247 NTDLNNVGLTTLKGFPTLPMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSGN--KIKDL 417
+ L+N G+T + L L++S+NR++ G T L+ +L LNL GN +
Sbjct: 570 SVSLSNNGITIMNADQIPNSLESLDVSNNRLAKLGKTALAAKSQLRRLNLKGNLLTVVAT 629
Query: 418 ETLKPLEA 441
E++K +EA
Sbjct: 630 ESMKVVEA 637
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 37.1 bits (82), Expect = 0.013
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +1
Query: 196 LQKYEHSWFNR*IYKFTNTDLNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKK 375
L +++ S F+ + + DL+N + T+ P L L L L +N+++ LT LS C
Sbjct: 942 LSRFDCSLFD--LPNLESVDLSNNSIKTIIRRP-LKTLTSLNLQNNKLTT-LTPLS-CPN 996
Query: 376 LAHLNLSGNKIKDLETLKPL 435
L L++S NK+ +LKPL
Sbjct: 997 LVSLDISNNKLASCASLKPL 1016
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 298 LPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKD 414
L L+ L ++ N++ + LTFL K L +L+L+ NK+KD
Sbjct: 133 LTNLQYLNIASNKLKS-LTFLRDMKDLTNLSLADNKMKD 170
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLE 438
L+KL L DN I + + L L +LN++ NK+K L L+ ++
Sbjct: 114 LKKLFLYDNAIEDA-SCLCALTNLQYLNIASNKLKSLTFLRDMK 156
>Z74473-7|CAA98952.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 306 HRQRRKTFECCETHIVKISICKFVYSSVKPTMFVLLQLSRFSSFTCEGSLP 154
H TF+ ++ ++SIC FV++ V++ + F FT EGS P
Sbjct: 429 HSSGNYTFDLQRSNKTELSICDFVFNIPAANSAVVMTFTEFDKFTQEGSGP 479
>Z74046-5|CAA98557.1| 3871|Caenorhabditis elegans Hypothetical
protein ZC116.3 protein.
Length = 3871
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -2
Query: 306 HRQRRKTFECCETHIVKISICKFVYSSVKPTMFVLLQLSRFSSFTCEGSLP 154
H TF+ ++ ++SIC FV++ V++ + F FT EGS P
Sbjct: 429 HSSGNYTFDLQRSNKTELSICDFVFNIPAANSAVVMTFTEFDKFTQEGSGP 479
>U39849-4|AAA81047.1| 349|Caenorhabditis elegans Hypothetical
protein C06A8.6 protein.
Length = 349
Score = 33.9 bits (74), Expect = 0.12
Identities = 21/56 (37%), Positives = 31/56 (55%)
Frame = +1
Query: 271 LTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLE 438
+T ++G TL L LEL DNRI+ + L KL L L N+I+ +E + L+
Sbjct: 132 ITKIEGLDTLTELEYLELGDNRIAK-IENLDNNLKLDRLFLGANQIRLIENVDHLK 186
>U41110-4|AAA82419.1| 575|Caenorhabditis elegans Hypothetical
protein ZK682.5 protein.
Length = 575
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = +1
Query: 259 NNVGLTTLKGFPTLPMLRKLELSDNRI----SNGLTFLSGCKKLAHLNLSGNKIKD 414
NN+G G P L LRKL L+ NRI S L L L+GN++ D
Sbjct: 118 NNLGQIPQTGIPRLRNLRKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTD 173
>AF098504-3|AAK73898.4| 2395|Caenorhabditis elegans Leucine-rich
repeats, ras-likedomain, kinase protein 1 protein.
Length = 2395
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 LNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGN-KIKDL 417
L ++ +T LP L +++SDN++ ++ L+ LNLSGN IK+L
Sbjct: 869 LRSISVTNAASKVLLPALNVMDISDNKLLQAPPDVARLTLLSMLNLSGNTAIKEL 923
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 295 TLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 420
+L + +++LSDNR++ + L L LNL+ N I+ +E
Sbjct: 531 SLAAITRVDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIE 572
>AB297384-1|BAF48647.1| 2393|Caenorhabditis elegans PARK8-related
kinase protein.
Length = 2393
Score = 31.1 bits (67), Expect = 0.84
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 LNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGN-KIKDL 417
L ++ +T LP L +++SDN++ ++ L+ LNLSGN IK+L
Sbjct: 867 LRSISVTNAASKVLLPALNVMDISDNKLLQAPPDVARLTLLSMLNLSGNTAIKEL 921
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 295 TLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 420
+L + +++LSDNR++ + L L LNL+ N I+ +E
Sbjct: 529 SLAAITRVDLSDNRLNTFPSILFQMPSLRSLNLADNSIRKIE 570
>Z79598-2|CAB01864.1| 738|Caenorhabditis elegans Hypothetical
protein C44H4.2 protein.
Length = 738
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 259 NNVGLTTLKGFPTLPMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSGNKIKDLET 423
N + T F T L L+L++N I LSG K+L L L+ NKI ++ +
Sbjct: 231 NKITKLTAYQFQTFEQLEMLDLTNNEIGAIPANSLSGLKQLRQLYLAHNKISNISS 286
>U39996-8|AAA81094.2| 1102|Caenorhabditis elegans Hypothetical
protein C56E6.6 protein.
Length = 1102
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLE 420
L+ L+L++N I L + L HLNL+GNK+ ++
Sbjct: 219 LKTLKLAENMIHATPEALRDLRNLTHLNLNGNKLNRID 256
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 256 LNNVGLTTLKGFPTLPMLRKLELSDN---RISNGLTFLSGCKKLAHLNLSGNKIKDLE 420
LN + LKG L +L +++N I +G+ LSG K+L HL++S NKI L+
Sbjct: 252 LNRIDGDVLKG--CTDTLVELFIANNYLEHIPHGV--LSGMKQLEHLDISKNKIMSLK 305
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 256 LNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTF-LSGCKKLAHLNLSGNKI 408
L N L L LR L L +N+I F L+ KL HL+L+GN++
Sbjct: 375 LQNNQLAHFPSLFRLDKLRHLMLDNNQIQKIDNFSLADLPKLQHLSLAGNQL 426
>AC006661-2|AAK31542.1| 253|Caenorhabditis elegans
Spliceosome-associated proteinprotein 1 protein.
Length = 253
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)
Frame = +1
Query: 238 KFTNTDLNNVGLTTLKGFPTLPMLRKLELSDNRISN-GLTFLSGCKKLAHLNLSGNKIKD 414
+F DL + + L FPT L L L +NRI+ + L L L+ N I +
Sbjct: 43 QFDVIDLTDNDIRKLDNFPTFSRLNTLYLHNNRINYIAPDIATKLPNLKTLALTNNNICE 102
Query: 415 LETLKPLEAXXXXXXXXXXXXXVTSIEDYK 504
L ++PL +T ++Y+
Sbjct: 103 LGDIEPLAECKKLEYVTFIGNPITHKDNYR 132
>U29380-13|AAL11485.1| 227|Caenorhabditis elegans Hypothetical
protein ZK546.2b protein.
Length = 227
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 292 PTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
P +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 24 PLADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 76
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 417
L++L L++N + L KKL LNL+GNK+K L
Sbjct: 52 LKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 88
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 98 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 145
>U29380-12|AAR12986.1| 485|Caenorhabditis elegans Hypothetical
protein ZK546.2a protein.
Length = 485
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 292 PTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
P +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 282 PLADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 334
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 417
L++L L++N + L KKL LNL+GNK+K L
Sbjct: 310 LKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 346
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 356 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 403
>U29380-11|AAR12987.1| 501|Caenorhabditis elegans Hypothetical
protein ZK546.2c protein.
Length = 501
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 292 PTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
P +LR LELS+N+I F+ +L L+L+ N ++ +L ++K LE
Sbjct: 298 PLADVLRNLELSENKIREIPIFIGQFSQLKQLHLANNCLEFLPDELGSMKKLE 350
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 417
L++L L++N + L KKL LNL+GNK+K L
Sbjct: 326 LKQLHLANNCLEFLPDELGSMKKLEILNLAGNKLKAL 362
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +1
Query: 307 LRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIK----DLETLKPLE 438
L+ ++LS N + + GC +L LNL+GN+I+ D+ LK +E
Sbjct: 372 LKTIDLSSNVFTVFPVAVIGCLQLDILNLNGNQIESLPDDISNLKVIE 419
>Z81130-10|CAB03418.1| 653|Caenorhabditis elegans Hypothetical
protein T23G11.6a protein.
Length = 653
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 301 PMLRKLELSDNRISNGL--TFLSGCKKLAHLNLSGNKIKDLETL 426
P L +L+LS ISN + TF + L LNL NK+K L L
Sbjct: 398 PKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLPNL 441
>Z81130-9|CAI70413.1| 616|Caenorhabditis elegans Hypothetical
protein T23G11.6b protein.
Length = 616
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 301 PMLRKLELSDNRISNGL--TFLSGCKKLAHLNLSGNKIKDLETL 426
P L +L+LS ISN + TF + L LNL NK+K L L
Sbjct: 398 PKLEELDLSKCNISNIVENTFENQKDSLKKLNLQKNKLKSLPNL 441
>Z36753-8|CAA85336.1| 326|Caenorhabditis elegans Hypothetical
protein T09A5.9 protein.
Length = 326
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 280 LKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDLETLKPLE 438
++ L L+ LEL DNRI + + L L + NKI+ LE ++ L+
Sbjct: 140 IENLEALTQLKLLELGDNRIKK-IENIGHLVNLDELFIGKNKIRQLEGVETLQ 191
>Z35598-2|CAA84651.2| 656|Caenorhabditis elegans Hypothetical
protein F10F2.4 protein.
Length = 656
Score = 28.7 bits (61), Expect = 4.5
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Frame = +1
Query: 253 DLNNVGLTTLKG--FPTLPMLRKLELSDNRISN--GLTF-LSGCKKLAHLNLSGNKI 408
DL+N L TL +L LR L LS+NR+SN LT+ L+ L L+LSGN I
Sbjct: 101 DLSNNHLETLPPTVLRSLKFLRVLILSNNRLSNLDQLTWILAPGVVLEQLDLSGNPI 157
>Z81531-3|CAB04315.1| 381|Caenorhabditis elegans Hypothetical
protein F36D3.3 protein.
Length = 381
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -2
Query: 237 VYSSVKPTMF-VLLQLSRFSSFTCEGSLPLRSKMILFS 127
V ++ P +F V L +FS F CE S PLR ++FS
Sbjct: 11 VSTASAPNIFGVYPYLLKFSPFNCEKSNPLRFVFMIFS 48
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = -2
Query: 339 YSIV*QFQFSEHRQRRKTFECCETHI 262
Y+ + QF+ +E R++R+T++CC I
Sbjct: 69 YTKLDQFRKAESREKRQTYQCCSCGI 94
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I
homolog protein.
Length = 1257
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 244 TNTDLNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 417
TN L+N+ T + LR ++ S+N + L + L LNLSGNKI+ L
Sbjct: 207 TNRTLDNIPPT----LDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNLSGNKIEKL 260
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +1
Query: 244 TNTDLNNVGLTTLKGFPTLPMLRKLELSDNRISNGLTFLSGCKKLAHLNLSGNKIKDL 417
TN L+N+ T + LR ++ S+N + L + L LNLSGNKI+ L
Sbjct: 207 TNRTLDNIPPT----LDDMHNLRDVDFSENNLPIVPEALFKLRNLRKLNLSGNKIEKL 260
>AC006689-3|AAO21400.1| 310|Caenorhabditis elegans Hypothetical
protein T22E7.1b protein.
Length = 310
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 283 KGFPTLPMLRKLELSDNRISNGLTFLSGC-KKLAHLNLSGNKIKDL 417
K F + L++LELS+NRI + F C K+L L L+GN I+ +
Sbjct: 172 KTFCGIQGLQRLELSNNRIPS-FDFARTCLKELKALMLAGNLIQKI 216
>AC006689-2|AAF39970.2| 341|Caenorhabditis elegans Hypothetical
protein T22E7.1a protein.
Length = 341
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 283 KGFPTLPMLRKLELSDNRISNGLTFLSGC-KKLAHLNLSGNKIKDL 417
K F + L++LELS+NRI + F C K+L L L+GN I+ +
Sbjct: 172 KTFCGIQGLQRLELSNNRIPS-FDFARTCLKELKALMLAGNLIQKI 216
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,323,716
Number of Sequences: 27780
Number of extensions: 258593
Number of successful extensions: 757
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -