Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30125
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 99 6e-21
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 99 6e-21
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 99 6e-21
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 51 2e-06
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 36 0.045
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 36 0.045
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 36 0.045
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 36 0.045
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 36 0.045
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 99.1 bits (236), Expect = 6e-21
Identities = 58/112 (51%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Frame = +1
Query: 379 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*R-VSVS*YTNVDSPS* 555
+VRKVLQLFRLRQINNGVF++LNKAT+NML IAEPYI WGYPN + V Y
Sbjct: 94 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 153
Query: 556 VDNVYQSLSNSIVEKRLHK-HHIICVEDSSMRSSLVGRKVPVTRVNFLWPFK 708
V N ++E++L + H I CVED VG NFLWPFK
Sbjct: 154 RQRV-PITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYAS-NFLWPFK 203
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 263 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 382
E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 55 EQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 94
Score = 32.7 bits (71), Expect = 0.55
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +3
Query: 102 LPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEY 254
LPAVPES LK + LK+ + +K+E RAE+Y EY
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEY 51
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 99.1 bits (236), Expect = 6e-21
Identities = 58/112 (51%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Frame = +1
Query: 379 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*R-VSVS*YTNVDSPS* 555
+VRKVLQLFRLRQINNGVF++LNKAT+NML IAEPYI WGYPN + V Y
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 556 VDNVYQSLSNSIVEKRLHK-HHIICVEDSSMRSSLVGRKVPVTRVNFLWPFK 708
V N ++E++L + H I CVED VG NFLWPFK
Sbjct: 167 RQRV-PITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYAS-NFLWPFK 216
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 263 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 382
E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 68 EQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 72 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 251
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 252 Y 254
Y
Sbjct: 64 Y 64
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 99.1 bits (236), Expect = 6e-21
Identities = 58/112 (51%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Frame = +1
Query: 379 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*R-VSVS*YTNVDSPS* 555
+VRKVLQLFRLRQINNGVF++LNKAT+NML IAEPYI WGYPN + V Y
Sbjct: 107 KVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWGYPNLKSVRELIYKRGFVKHN 166
Query: 556 VDNVYQSLSNSIVEKRLHK-HHIICVEDSSMRSSLVGRKVPVTRVNFLWPFK 708
V N ++E++L + H I CVED VG NFLWPFK
Sbjct: 167 RQRV-PITDNFVIERKLRQAHQIQCVEDLVHEIFTVGPNFKYAS-NFLWPFK 216
Score = 58.8 bits (136), Expect = 7e-09
Identities = 26/40 (65%), Positives = 33/40 (82%)
Frame = +2
Query: 263 ERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPK 382
E+ EI+L R A+ R +YVP EAKLAFV+RIRGIN+V+PK
Sbjct: 68 EQREIKLRRLAKKRNQFYVPAEAKLAFVVRIRGINKVAPK 107
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/61 (39%), Positives = 31/61 (50%)
Frame = +3
Query: 72 PVKGKEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKE 251
PV K +KKLPAVPES LK + LK+ + +K+E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 252 Y 254
Y
Sbjct: 64 Y 64
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/51 (45%), Positives = 33/51 (64%)
Frame = -2
Query: 528 LTHGHSLVGVSPSNVRLGDT*HIHSSLIQTYKHTIVYLAQSKQLQNFTDFG 376
L HG +G++P +V LGD H+ L+Q +HT+V L Q++QLQN D G
Sbjct: 42 LPHGLQ-IGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLG 91
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1
Query: 373 NLVDTTDSDDKCQFGFPGNVVVATI 299
+LVDT D+DDK QFG G+V + +
Sbjct: 93 HLVDTADTDDKGQFGLGGHVELVAL 117
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.045
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 495 GIPQLKSVRELVYKRGFAKLSGQRIPI 575
G P L S+RELV+K+GFA++ G++ I
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAI 177
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 391 VLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*RVSVS*YTNVDSPS*VDNVY 570
+ + R+ +N VF+ K +L + EP++ +G P+ S+ + +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS-LSSIRELVFKKGFARIDGKK 174
Query: 571 QSL-SNSIVEKRLHKHHIICVED 636
++ SN++VE++L +IC+ED
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLED 197
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.045
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 495 GIPQLKSVRELVYKRGFAKLSGQRIPI 575
G P L S+RELV+K+GFA++ G++ I
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAI 177
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 391 VLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*RVSVS*YTNVDSPS*VDNVY 570
+ + R+ +N VF+ K +L + EP++ +G P+ S+ + +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS-LSSIRELVFKKGFARIDGKK 174
Query: 571 QSL-SNSIVEKRLHKHHIICVED 636
++ SN++VE++L +IC+ED
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLED 197
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.045
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 495 GIPQLKSVRELVYKRGFAKLSGQRIPI 575
G P L S+RELV+K+GFA++ G++ I
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAI 177
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 391 VLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*RVSVS*YTNVDSPS*VDNVY 570
+ + R+ +N VF+ K +L + EP++ +G P+ S+ + +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS-LSSIRELVFKKGFARIDGKK 174
Query: 571 QSL-SNSIVEKRLHKHHIICVED 636
++ SN++VE++L +IC+ED
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLED 197
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.045
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 495 GIPQLKSVRELVYKRGFAKLSGQRIPI 575
G P L S+RELV+K+GFA++ G++ I
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAI 177
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 391 VLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*RVSVS*YTNVDSPS*VDNVY 570
+ + R+ +N VF+ K +L + EP++ +G P+ S+ + +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS-LSSIRELVFKKGFARIDGKK 174
Query: 571 QSL-SNSIVEKRLHKHHIICVED 636
++ SN++VE++L +IC+ED
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLED 197
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 36.3 bits (80), Expect = 0.045
Identities = 14/27 (51%), Positives = 21/27 (77%)
Frame = +3
Query: 495 GIPQLKSVRELVYKRGFAKLSGQRIPI 575
G P L S+RELV+K+GFA++ G++ I
Sbjct: 151 GNPSLSSIRELVFKKGFARIDGKKTAI 177
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +1
Query: 391 VLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN*RVSVS*YTNVDSPS*VDNVY 570
+ + R+ +N VF+ K +L + EP++ +G P+ S+ + +D
Sbjct: 116 IFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPS-LSSIRELVFKKGFARIDGKK 174
Query: 571 QSL-SNSIVEKRLHKHHIICVED 636
++ SN++VE++L +IC+ED
Sbjct: 175 TAIQSNTMVEQQLGDKGVICLED 197
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,686,095
Number of Sequences: 53049
Number of extensions: 687032
Number of successful extensions: 1525
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -