Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30121
(716 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 155 5e-39
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 153 2e-38
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 129 4e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 95 9e-21
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 79 6e-16
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 69 5e-13
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 68 2e-12
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 53 5e-08
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 29 0.66
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 28 1.2
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 27 2.0
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 27 2.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 4.7
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 4.7
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 8.2
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 155 bits (377), Expect = 5e-39
Identities = 73/85 (85%), Positives = 79/85 (92%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
VK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD+ N RA+RRLRTACE AKRTLSSS
Sbjct: 217 VKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSA 276
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
QASIEIDSLFEGIDFYTSITRARFE
Sbjct: 277 QASIEIDSLFEGIDFYTSITRARFE 301
Score = 128 bits (310), Expect = 6e-31
Identities = 72/134 (53%), Positives = 85/134 (63%)
Frame = +3
Query: 255 ELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 434
EL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSI
Sbjct: 302 ELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSI 361
Query: 435 YPDEXXXXXXXXXXXILHGDNSEEVKDXXXXXXXXXXXGIETAGSVMTTLHYSGNTNQSP 614
PDE +L GD SE+ +D GIETAG VMT L T P
Sbjct: 362 NPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTT--IP 419
Query: 615 T*NRLRHSTTYSDN 656
T + +TYSDN
Sbjct: 420 T-KKSEIFSTYSDN 432
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 153 bits (371), Expect = 2e-38
Identities = 72/85 (84%), Positives = 78/85 (91%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
VK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD+ N RA+RRLRTACE AKRTLSSS
Sbjct: 217 VKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLRTACERAKRTLSSSA 276
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
QASIEIDSL+EGIDFYTSITRARFE
Sbjct: 277 QASIEIDSLYEGIDFYTSITRARFE 301
Score = 127 bits (307), Expect = 1e-30
Identities = 71/134 (52%), Positives = 86/134 (64%)
Frame = +3
Query: 255 ELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 434
EL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSI
Sbjct: 302 ELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSI 361
Query: 435 YPDEXXXXXXXXXXXILHGDNSEEVKDXXXXXXXXXXXGIETAGSVMTTLHYSGNTNQSP 614
PDE IL GD SE+ +D GIETAG VMT L T P
Sbjct: 362 NPDEAVAYGAAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTT--IP 419
Query: 615 T*NRLRHSTTYSDN 656
T + +TY+DN
Sbjct: 420 T-KKSEVFSTYADN 432
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 129 bits (311), Expect = 4e-31
Identities = 60/85 (70%), Positives = 71/85 (83%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
V +TAGDTHLGGEDFDN +V HF+QEFKRK K D++ + RALRRLR+ACE AKR LSS T
Sbjct: 221 VLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRLRSACERAKRALSSVT 280
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
Q ++E+DSL GIDF +SITRARFE
Sbjct: 281 QTTVEVDSLSNGIDFSSSITRARFE 305
Score = 99.1 bits (236), Expect = 5e-22
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 1/140 (0%)
Frame = +3
Query: 255 ELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 434
++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSI
Sbjct: 306 DINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSI 365
Query: 435 YPDEXXXXXXXXXXXIL-HGDNSEEVKDXXXXXXXXXXXGIETAGSVMTTLHYSGNTNQS 611
PDE +L + +S++ +D G+ G+V +
Sbjct: 366 NPDEAVAYGAAVQAAVLTNKADSDKTQDLLLLDVVPLSLGVAMEGNVFGVV--CPRNTPI 423
Query: 612 PT*NRLRHSTTYSDNPTRST 671
PT + R TT +DN T T
Sbjct: 424 PTIKK-RTFTTVADNQTTVT 442
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 95.1 bits (226), Expect = 9e-21
Identities = 56/136 (41%), Positives = 75/136 (55%)
Frame = +3
Query: 255 ELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 434
E+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K I
Sbjct: 334 EINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGI 392
Query: 435 YPDEXXXXXXXXXXXILHGDNSEEVKDXXXXXXXXXXXGIETAGSVMTTLHYSGNTNQSP 614
PDE +L G+ + + GIET G VMT L G P
Sbjct: 393 NPDEAVAYGAAVQAGVLSGEEGSD--NIVLLDVIPLTLGIETTGGVMTKL--IGRNTPIP 448
Query: 615 T*NRLRHSTTYSDNPT 662
T ST + T
Sbjct: 449 TRKSQIFSTAVDNQNT 464
Score = 91.5 bits (217), Expect = 1e-19
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
V +T+GDTHLGGEDFDNR++N+ + + RK D+ + +A+ +L+ E AKRTLSS
Sbjct: 249 VLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKLKREVEKAKRTLSSQK 308
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
IEI+S F G DF +++RA+FE
Sbjct: 309 SVRIEIESFFNGQDFSETLSRAKFE 333
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 79.0 bits (186), Expect = 6e-16
Identities = 37/85 (43%), Positives = 55/85 (64%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
+ ++ D +LGGE + +VN F +EF++K D N R+L +LR CE KR LS+ T
Sbjct: 243 ILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRAQCEITKRVLSNGT 302
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
AS +DSL +GIDF++SI R R++
Sbjct: 303 TASAAVDSLADGIDFHSSINRLRYD 327
Score = 32.7 bits (71), Expect = 0.054
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Frame = +3
Query: 231 VNYSCSLRELNADLFRSTM-----EPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLL 395
+++ S+ L DL S + V +++ A M+ I +++L GG++ PK+ L+
Sbjct: 315 IDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILAGGASNTPKLTSLM 374
Query: 396 QDFFNGKELNKS 431
+ F + + +S
Sbjct: 375 ESIFPEQTIIRS 386
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 69.3 bits (162), Expect = 5e-13
Identities = 32/85 (37%), Positives = 51/85 (60%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
+KST D +LG + D ++++F EFK KYK D+ +N +A RL TA E K+ LS++
Sbjct: 225 IKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATFRLATAVERLKKVLSANA 284
Query: 181 QASIEIDSLFEGIDFYTSITRARFE 255
A + ++ + ID + I R+ FE
Sbjct: 285 NAPLNVEMIMNDIDASSFIKRSDFE 309
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/64 (35%), Positives = 39/64 (60%)
Frame = +3
Query: 255 ELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSI 434
EL L P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++
Sbjct: 310 ELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTL 368
Query: 435 YPDE 446
DE
Sbjct: 369 NQDE 372
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 228 HVNYSCSLRELNADLFRSTMEPVEKSLRDAKMDKAQI 338
H NYS S+ E + F +++L MDKA I
Sbjct: 208 HSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALI 244
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 67.7 bits (158), Expect = 2e-12
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 1 VKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSST 180
V+ST GDTHLGGEDFD +V H V+ FK+ DL+ ++ A++R+R A E AK LSS +
Sbjct: 261 VRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRIREAAEKAKCELSSLS 320
Query: 181 QASIEI 198
+ I +
Sbjct: 321 KTDISL 326
Score = 66.1 bits (154), Expect = 5e-12
Identities = 40/122 (32%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Frame = +3
Query: 228 HVNYSCS---LRELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQ 398
H+N S +L L R T++P +++L+DA + ++I++++LVGG TR+P+V + ++
Sbjct: 338 HINMEISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVK 397
Query: 399 DFFNGKELNKSIYPDEXXXXXXXXXXXILHGDNSEEVKDXXXXXXXXXXXGIETAGSVMT 578
F +E KS+ PDE +L G VKD GIET G V T
Sbjct: 398 SIFK-REPAKSVNPDEAVAIGAAIQGGVLSG----HVKDLVLLDVTPLSLGIETLGGVFT 452
Query: 579 TL 584
L
Sbjct: 453 RL 454
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 52.8 bits (121), Expect = 5e-08
Identities = 27/77 (35%), Positives = 42/77 (54%)
Frame = +1
Query: 28 LGGEDFDNRMVNHFVQEFKRKYKKDLATNKRALRRLRTACETAKRTLSSSTQASIEIDSL 207
L G + + +++ F +K+ DL+ N RAL RL K LS++++A I+ L
Sbjct: 262 LSGNEINRKLIGFMKNSFYQKHGIDLSHNHRALARLEKEALRVKHILSANSEAIASIEEL 321
Query: 208 FEGIDFYTSITRARFES 258
+GIDF ITR+ ES
Sbjct: 322 ADGIDFRLKITRSVLES 338
Score = 52.8 bits (121), Expect = 5e-08
Identities = 22/66 (33%), Positives = 43/66 (65%)
Frame = +3
Query: 249 LRELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNK 428
L L D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K
Sbjct: 336 LESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISK 395
Query: 429 SIYPDE 446
++ DE
Sbjct: 396 NVNADE 401
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 29.1 bits (62), Expect = 0.66
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -1
Query: 527 KQQQILDLLR-VVTVQDSSLDSCTISYG-LVRVYRFV--ELLSIKEILQELLHLGDTSGA 360
K QQ+LDLL +V D+ +DS + L ++ V S+ ELL LGD S
Sbjct: 932 KHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLKGTTSLANHTNELLGLGDESLC 991
Query: 359 THQYNIVDLSLIHLGIT 309
+ I D SL+ L T
Sbjct: 992 NLETTIEDTSLVKLETT 1008
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 1.2
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 89 NTKRTSLPTRELLGVCVLHVRRQR-GPCHRPHKRALR*ILSLRVLTSTRQL-LVLASRAE 262
N K+ LP E + + + V GP H+PH R LR + LR + QL VLA+ +
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLRALKYLR--ENYPQLPFVLATGRQ 66
Query: 263 RRSV 274
R SV
Sbjct: 67 RTSV 70
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 27.5 bits (58), Expect = 2.0
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +3
Query: 216 Y*LLHVNYSCSLRELNADLFRSTMEPVEKSL 308
Y +HVN+S S + + D++R +P+E ++
Sbjct: 297 YERIHVNFSLSSYQQDYDIYRKPTDPIEVTI 327
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 235 ITRARFES*TPICSGLPWSQWRSLSVMPRWIRLKSTILYWWVAPLVSPRCRSSCKISLME 414
I AR E TP + W+ R SV+P+ + + + PL + I ++
Sbjct: 240 IANARGEGITPANIAISWAVKRGTSVLPKSVNESRIVSNFLYIPLTDKEMEAINNIGVVR 299
Query: 415 RSS 423
R S
Sbjct: 300 RFS 302
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 4.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 342 RGFEPYPSWHHGETSPLAP 286
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 4.7
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 83 LNSWTKWLTMRLSKSSPPKWVSPAVDF 3
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 8.2
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 268 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 357
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,099,970
Number of Sequences: 5004
Number of extensions: 62837
Number of successful extensions: 219
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 216
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 335201398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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