Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30120
         (698 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   5.5  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.3  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   7.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   7.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.7  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 56  NEVFDCNLFYRFGATLRKWSPKM 124
           N   DC+    FGA L+K  PK+
Sbjct: 644 NSTVDCDDVGTFGAILKKLLPKV 666


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = +3

Query: 168 KDKPSQITTDDASAVQEMQSEVECLAGTE 254
           K+ PSQ   +  +A +++Q   +C+ G +
Sbjct: 450 KNMPSQYIHEPWTAPEQVQRAAKCIIGKD 478


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 356 CQPGTSFQRDCNTC 397
           C+PGT F    N C
Sbjct: 504 CRPGTVFHTQSNIC 517


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -1

Query: 563 LQMPYPSALHLQLLHWFDPTIPERI 489
           +Q+P+P+A H  LL    P +P  +
Sbjct: 117 MQLPHPAAAHSALL---SPAMPHNL 138


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +2

Query: 170  RQTESDNNR*RVCRPRNAVGSGMPGGNRGESNCHFCRCSDSGVAECL 310
            R + S  +  R   PR+  G   PGG+ G  +  F   S +   + L
Sbjct: 932  RNSASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSLSGNNTGDAL 978


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 92  QNDKTDCNQTPHFTQSSITTLFSTREVH 9
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +1

Query: 220 CSRKWNAWREPRGEQL 267
           C+R W  W     EQL
Sbjct: 112 CTRYWTCWNGTATEQL 127


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 303 SATPESEHLQKWQLLSPRFPPGIPLPTAFLG 211
           S       L+ +  L P   PG P+ T +LG
Sbjct: 566 SGLGSDRRLELFLELLPMLAPGAPVMTRYLG 596


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +2

Query: 296 VAECLRQDSCDQIIFTEPVRCQPGTSFQRDCNT 394
           VA+ L+ ++ +Q +  E  +  PG   Q+ C+T
Sbjct: 755 VAQYLQIENVEQTLNHEIKKVIPGRITQKSCST 787


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 92  QNDKTDCNQTPHFTQSSITTLFSTREVH 9
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 92  QNDKTDCNQTPHFTQSSITTLFSTREVH 9
           QN +    +   FT+ S+T+ F    +H
Sbjct: 232 QNRRMKAKKDTKFTEQSVTSTFDFLSLH 259


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/14 (50%), Positives = 7/14 (50%)
 Frame = +1

Query: 607  CAPKTMWKNECNTC 648
            CAP   W N  N C
Sbjct: 1307 CAPGLHWDNNKNIC 1320


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 646 TCCIHFSTSSSAHILSLAR*CVQ 578
           T C   S ++  HILS+   C Q
Sbjct: 315 TICTIMSAAAVEHILSIVNTCSQ 337


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 200 VICCYLTRFVF*FLLCCTWAFCARTAF 120
           ++C Y       FLLC  + +CA   F
Sbjct: 130 LLCIYYFVVPLFFLLCIYYFYCAFIIF 156


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -1

Query: 503 IPERILCPGSAQTSWELTIFYRHPRSIGPDRYLSRRKC 390
           +P   L   SAQT  EL + +    S+     L+R KC
Sbjct: 358 LPLTSLSLASAQTLSELDLSWNSISSLSHGGQLARFKC 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,078
Number of Sequences: 336
Number of extensions: 4555
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)