Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30120
(698 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 31 0.60
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 31 0.60
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 31 0.60
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 31 0.60
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 31 0.60
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 31 0.60
AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical ... 31 1.0
U41107-2|AAK73880.1| 111|Caenorhabditis elegans Temporarily ass... 28 2.0
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 29 2.4
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 29 4.2
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 29 4.2
U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr... 28 5.6
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 28 7.4
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 28 7.4
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 28 7.4
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 28 7.4
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 28 7.4
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 28 7.4
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 28 7.4
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 7.4
AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cycl... 28 7.4
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 7.4
AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical ... 28 7.4
AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor typ... 28 7.4
AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin relat... 27 9.8
AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical... 27 9.8
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 649 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 702
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 703 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 737
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 687 DDCTSCVCSAEGSADCYKEACDESL 711
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 329 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 370
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 583 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 636
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 637 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 621 DDCTSCVCSAEGSADCYKEACDESL 645
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 649 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 702
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 703 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 737
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 687 DDCTSCVCSAEGSADCYKEACDESL 711
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 329 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 370
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 583 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 636
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 637 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 621 DDCTSCVCSAEGSADCYKEACDESL 645
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 583 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 636
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 637 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 621 DDCTSCVCSAEGSADCYKEACDESL 645
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.5 bits (68), Expect = 0.60
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 1/95 (1%)
Frame = +2
Query: 251 RGESNCHFCRCSDSGVAECLRQDSCDQIIFTEPVRCQPGTS-FQRDCNTCVCLDNGLGLC 427
+ E +C C E + + D I+ T+ GT+ DC +CVC G C
Sbjct: 583 QNEEDC--CPTCPEQKVENTKNEKGDTIVCTDDA----GTAHIVDDCTSCVCSAEGSADC 636
Query: 428 SLDACRRSSTPKKFELIQGRECAPGSSGRTSVTVV 532
+AC S + L+ +C P S S + V
Sbjct: 637 YKEACDESLECRGNPLVIKGKCCPVCSDALSSSAV 671
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 514 NQCNSCRCNADGYGICSDEACTEHI 588
+ C SC C+A+G C EAC E +
Sbjct: 621 DDCTSCVCSAEGSADCYKEACDESL 645
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>AF016668-7|AAB66091.3| 471|Caenorhabditis elegans Hypothetical
protein F36H9.1 protein.
Length = 471
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 484 QRMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKTMWK-NECNTCWCT 657
Q+ R G+V S CNS +CN D + I SD T I P +C + + + N C +CT
Sbjct: 70 QKNRRGLV-SCICNSDKCNDDSFTIPSDVVLT---IPPVIKCFSQDLIEDNYCFGHYCT 124
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +1
Query: 484 QRMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKTMWKNECNTCW 651
Q R G+V S CN+ +CN D + I +D T + P +C + NE N C+
Sbjct: 276 QTNRKGLV-SCFCNTDKCNDDSFEIPTDVVLT---VPPVMKCFEDDL--NEDNYCY 325
>U41107-2|AAK73880.1| 111|Caenorhabditis elegans Temporarily
assigned gene nameprotein 234 protein.
Length = 111
Score = 27.9 bits (59), Expect(2) = 2.0
Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = +1
Query: 508 GSNQCNS--CRCNADGYGIC 561
G+NQC+S C N +GYG C
Sbjct: 67 GTNQCSSSGCSTNKNGYGTC 86
Score = 20.6 bits (41), Expect(2) = 2.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +1
Query: 628 KNECNTCWCTSDWVN 672
KN TC CT D N
Sbjct: 80 KNGYGTCCCTRDLCN 94
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 368 TSFQRDCNTCVCLDNGLGLCSLDACRRSSTPKKFELIQGRECAPGS-SGR 514
T+ R C + G C ACR+ S + +G EC PG+ +GR
Sbjct: 23 TASGRGCTHSMQCGRGF-FCQEGACRKDSCSNDLQCDEGEECRPGNVNGR 71
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +2
Query: 353 RCQPGTSFQRD-CNTCVCLDNGLGLCSLDACRRS-STPKKFE 472
+ + G ++Q+D C +C C + G +C C+ P+K E
Sbjct: 263 KLERGATWQKDDCTSCTCSELGAHMCEKYMCKTDCENPRKVE 304
>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
C41A3.1 protein.
Length = 7829
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 698 DAFHLSAHGFTQSEVHQ--HVLHSFFHIVFGAHSFFGSIM 585
D+ L HGF +E+ H + +VFGA+ F GSI+
Sbjct: 6287 DSTGLCKHGFRTTEIPSRLHPVSRGHALVFGANGFIGSIV 6326
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 5.6
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 102 CESGAL----KCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVEC 239
CE+G L +C P T+ PC + Q SK S+ ++ + V + VEC
Sbjct: 1521 CENGFLGDGYQCVPTTKKPCDSTQSSKSHCSE--SNMSCEVDTVDGSVEC 1568
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 209 RPRNAVGSGMPGGNRGESNCH 271
RP + VG+G PGG+ G S H
Sbjct: 343 RPGSGVGNGGPGGDNGNSPFH 363
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 209 RPRNAVGSGMPGGNRGESNCH 271
RP + VG+G PGG+ G S H
Sbjct: 343 RPGSGVGNGGPGGDNGNSPFH 363
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 282 HLQKWQLLSPRFPPGIPLPTAFL 214
HLQ+ +L P FPP +PL L
Sbjct: 697 HLQQRRLWMPEFPPNLPLEDVLL 719
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 282 HLQKWQLLSPRFPPGIPLPTAFL 214
HLQ+ +L P FPP +PL L
Sbjct: 697 HLQQRRLWMPEFPPNLPLEDVLL 719
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 ADPGQ-RMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKT 621
A GQ + SG G +C+ +C+A+ YG + CT + E CAP T
Sbjct: 350 AKTGQCQCESGYKGP-KCDERKCDAEQYGADCSKTCT-CVRENTLMCAPNT 398
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 ADPGQ-RMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKT 621
A GQ + SG G +C+ +C+A+ YG + CT + E CAP T
Sbjct: 350 AKTGQCQCESGYKGP-KCDERKCDAEQYGADCSKTCT-CVRENTLMCAPNT 398
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 ADPGQ-RMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKT 621
A GQ + SG G +C+ +C+A+ YG + CT + E CAP T
Sbjct: 350 AKTGQCQCESGYKGP-KCDERKCDAEQYGADCSKTCT-CVRENTLMCAPNT 398
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 472 ADPGQ-RMRSGIVGSNQCNSCRCNADGYGICSDEACTEHIIEPKKECAPKT 621
A GQ + SG G +C+ +C+A+ YG + CT + E CAP T
Sbjct: 350 AKTGQCQCESGYKGP-KCDERKCDAEQYGADCSKTCT-CVRENTLMCAPNT 398
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 119 KMQSWHRRPMCSRARIKRQTESDNNR*RVCRPRNAVGSGMPGGNRGESN 265
K+ SW + + + K + S NNR V R R + G RG SN
Sbjct: 73 KLDSWTEQKGAKKEKKKPEEGSYNNRGFVARGRGGGTGFVDRGGRGRSN 121
>AF067623-5|AAC17555.3| 1043|Caenorhabditis elegans Guanylyl cyclase
protein 23 protein.
Length = 1043
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 66 LIAICFIVLARHCESGALKCSP 131
L+ ICF +L+R CE+ AL +P
Sbjct: 441 LLIICFFILSRVCENRALANTP 462
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +2
Query: 119 KMQSWHRRPMCSRARIKRQTESDNNR*RVCRPRNAVGSGMPGGNRGESN 265
K+ SW + + + K + S NNR V R R + G RG SN
Sbjct: 73 KLDSWTEQKGAKKEKKKPEEGSYNNRGFVARGRGGGTGFVDRGGRGRSN 121
>AC024812-4|AAF59550.1| 197|Caenorhabditis elegans Hypothetical
protein Y54E10BR.6 protein.
Length = 197
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 78 CFIVLARHCESGALKCSPGTEGPCAAEQESKDKPSQITTDDASAVQEMQSEVE 236
CFI +RHC ++ P +E PC ++ D+ + I DD V+ + + V+
Sbjct: 129 CFI--SRHCIPPDMEFDPNSEKPC---YKTNDEANVIRNDDEIRVKLIGTRVD 176
>AB201390-1|BAE78830.1| 1073|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1073
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +3
Query: 66 LIAICFIVLARHCESGALKCSP 131
L+ ICF +L+R CE+ AL +P
Sbjct: 471 LLIICFFILSRVCENRALANTP 492
>AF039041-1|AAP46271.1| 1067|Caenorhabditis elegans Laminin related.
see also lmb-protein 1 protein.
Length = 1067
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
Frame = +2
Query: 254 GESNCHFCRCSDSGVA--ECLRQDS---CDQ--IIFTEPVRCQPGTSFQRDCNTCVCLDN 412
G S C C C G +C +Q C + I + +CQPG +C TC C D+
Sbjct: 838 GPSGCKKCDCDAVGSLGNDCDKQSGQCVCREKGIYGRQCNQCQPGFWGFPECRTCQCNDH 897
Query: 413 GLGLC--SLDAC 442
+C S AC
Sbjct: 898 A-NICDQSSGAC 908
>AC084159-10|AAK39362.1| 310|Caenorhabditis elegans Hypothetical
protein Y73B3A.5 protein.
Length = 310
Score = 27.5 bits (58), Expect = 9.8
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 500 GSSGRT---SVTVVGAMPMDTAFVVTKPALNTLSSQRKNV 610
GSSGRT + V P +AF T P LNT S+ K +
Sbjct: 269 GSSGRTPGLGESQVFQFPPVSAFQATNPLLNTFSNSDKRL 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,761,371
Number of Sequences: 27780
Number of extensions: 454711
Number of successful extensions: 1460
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1449
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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