Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30113
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   5.4  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   5.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   9.5  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   9.5  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 562 ISGSNSLGHXCS*WTRYCTMLW 497
           + G  S G+  S WT++  +LW
Sbjct: 406 VEGVGSTGYRSSWWTQFYCILW 427


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 562 ISGSNSLGHXCS*WTRYCTMLW 497
           + G  S G+  S WT++  +LW
Sbjct: 406 VEGVGSTGYRSSWWTQFYCILW 427


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 562 ISGSNSLGHXCS*WTRYCTMLW 497
           + G  S G+  S WT++  +LW
Sbjct: 384 VEGVGSTGYRSSWWTQFYCILW 405


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 445 ARIPGKGDRCRSITEASTTTWYN 513
           +R PG   RCRS  +  T  W++
Sbjct: 520 SREPGTAWRCRSCGKEVTNRWHH 542


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 445 ARIPGKGDRCRSITEASTTTWYN 513
           +R PG   RCRS  +  T  W++
Sbjct: 496 SREPGTAWRCRSCGKEVTNRWHH 518


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 767,002
Number of Sequences: 2352
Number of extensions: 14899
Number of successful extensions: 37
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)