Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30112
         (464 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   1.4  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   1.4  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   1.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   4.3  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   7.4  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   7.4  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.4  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.4  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   9.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   9.8  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   9.8  

>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/43 (18%), Positives = 23/43 (53%)
 Frame = +1

Query: 97  YLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
           + N R+K ++   +P+ +  R+K + +     ++  + + T+N
Sbjct: 281 FQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/43 (18%), Positives = 23/43 (53%)
 Frame = +1

Query: 97  YLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
           + N R+K ++   +P+ +  R+K + +     ++  + + T+N
Sbjct: 281 FQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 148 QKKRKKNHKSESVVNSENDIESNTENNN 231
           +K  K+ H+S    + ++D  SN+EN N
Sbjct: 277 EKIDKEEHESMDDDDDDDDDMSNSENQN 304


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 169 HKSESVVNSENDIESNTENNNVIGESNF 252
           H+  S  +S+N +    EN+N   + NF
Sbjct: 481 HQFYSSESSQNQVAPTGENSNSSSDFNF 508


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 169 HKSESVVNSENDIESNTENNNVIGESNF 252
           H+  S  +S+N +    EN+N   + NF
Sbjct: 429 HQFYSSESSQNQVAPTGENSNSSSDFNF 456


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 4/32 (12%)
 Frame = -3

Query: 195 RIYHRF----TLVVFLSFFLC*WYCECLLLFY 112
           RIY+ +    T  V L F LC  Y    LLFY
Sbjct: 55  RIYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 215 FDSMSFSEFTTDSLL 171
           FD MS+S+F   ++L
Sbjct: 7   FDEMSYSQFENQAVL 21


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 281 ICLVTQSTSSKLDSPITLLFSVFDS 207
           +CL   S  S+    + LLFSV  S
Sbjct: 211 VCLCGASVHSESSKVLPLLFSVSSS 235


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = -3

Query: 207 NVIFRIYHRFTLVVFLSFFLC*WYC 133
           N  +R+Y  F +  F   F   W C
Sbjct: 27  NPTYRLYKIFVVFSFAVTFFSAWIC 51


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 163 KNHKSESVVNSENDIESNTENN 228
           +N+K+   + S+ D   NTE+N
Sbjct: 17  QNYKTNPFLASDCDKNQNTEHN 38


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 163 KNHKSESVVNSENDIESNTENN 228
           +N+K+   + S+ D   NTE N
Sbjct: 17  QNYKTNPFLASDCDKNQNTEQN 38


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 163 KNHKSESVVNSENDIESNTENN 228
           +N+K+   + S+ D   NTE N
Sbjct: 17  QNYKTNPFLASDCDKNQNTEQN 38


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 9.8
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -2

Query: 391 VSSAVNFSSMIVS 353
           VSSA+NF+ M+++
Sbjct: 1   VSSAINFALMVLA 13


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,774
Number of Sequences: 336
Number of extensions: 1188
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10721526
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)