Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30112
(464 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703... 38 0.003
09_04_0247 + 16030543-16031324,16032812-16033088,16033374-160335... 33 0.086
06_01_0665 - 4855870-4855956,4856407-4856482,4856794-4856910,485... 30 0.80
05_07_0331 - 29324967-29326256,29326919-29327020,29327226-293272... 30 0.80
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 29 1.4
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773... 29 1.4
02_03_0320 + 17677809-17677929,17678203-17678289,17678657-176787... 29 1.4
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 29 2.4
12_01_0102 - 788403-788937,789051-789164,789323-789687 28 3.2
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 28 4.3
08_02_0431 + 17053928-17054189,17054296-17054564,17054661-170548... 27 5.6
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 27 5.6
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 5.6
11_01_0730 - 6037375-6037509,6037892-6038019,6038339-6038423,603... 27 7.4
03_02_0052 + 5285061-5285106,5285711-5285754,5286317-5286539,528... 27 7.4
10_08_0259 + 16274430-16274747,16275180-16275242,16275329-162754... 27 9.8
07_03_1578 + 27872636-27872840,27872928-27873175,27873215-278732... 27 9.8
05_07_0143 + 28000038-28000211,28002217-28002230,28002713-280027... 27 9.8
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 27 9.8
03_02_0056 - 5298807-5300033,5300132-5300298,5300395-5300617,530... 27 9.8
01_01_1098 - 8691312-8692430,8692640-8693509,8694522-8696105,869... 27 9.8
>12_01_1024 -
10467644-10469274,10469424-10469482,10469820-10470357,
10470975-10471666,10471912-10472062,10473797-10473864,
10473964-10474042,10474763-10474765,10476427-10477255
Length = 1349
Score = 38.3 bits (85), Expect = 0.003
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = +1
Query: 22 KNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTF-TIPSAQKKRKKNHKSESVVNSE 198
K + R S N P+ E L+LR ++ + F ++P + + R KN ++ E
Sbjct: 346 KEAAIRRASTNCGPMVSHYQLLYELALSLRPREPKNFYSVPRSSRLRDKNKNEGDIMVKE 405
Query: 199 NDIESNTENNNVI 237
N + S TENNN++
Sbjct: 406 NFVGSVTENNNLL 418
>09_04_0247 + 16030543-16031324,16032812-16033088,16033374-16033559,
16033714-16033866,16034277-16034702,16035922-16037668,
16037687-16038183,16038519-16038709,16038786-16038941,
16040077-16040311,16040416-16040723,16041279-16041439,
16041852-16041895,16041975-16042067
Length = 1751
Score = 33.5 bits (73), Expect = 0.086
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +1
Query: 13 IELKNNSKHRLSVNQQPLPDDDSTYDESYL-------NLRVKQEQTFTIPSAQKKRKKNH 171
+++ + KH ++ + + +D + SYL + K E+T S QK+ K N
Sbjct: 1247 VDISKHDKHTKTIVKSGVLSEDPDFKNSYLKKEESTDDASSKTEETTNNASLQKEEKAND 1306
Query: 172 KSESVVNSENDIE 210
S++ N++N IE
Sbjct: 1307 SSKNAENADNPIE 1319
>06_01_0665 -
4855870-4855956,4856407-4856482,4856794-4856910,
4857062-4857127,4858578-4858670,4858788-4858909,
4859810-4860365,4860485-4860628,4860698-4860831,
4861003-4861100,4861172-4861353,4861464-4861540,
4862083-4862305,4862580-4862745,4862836-4863040,
4864981-4865199
Length = 854
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +1
Query: 64 LPDDDSTYDESYL---NLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNV 234
L + D Y+ + L NLR++ I + KKR++ + ES++ SE D NN++
Sbjct: 358 LHEKDKNYEATRLHFENLRIRYGNPIIILNLIKKRERRPR-ESILRSEFDKAIKIINNDL 416
Query: 235 IGESNFELV 261
GE++ +
Sbjct: 417 PGENHLRFL 425
>05_07_0331 -
29324967-29326256,29326919-29327020,29327226-29327278,
29327628-29327674,29327762-29327841,29327933-29328016,
29328383-29328433,29328925-29329050,29329231-29329347,
29329710-29329851,29329986-29330053,29330509-29330608,
29330713-29330840,29330929-29330997,29331083-29331205
Length = 859
Score = 30.3 bits (65), Expect = 0.80
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 37 HRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKR 159
+R S+ P+P DDS D++ + VK+++ + + ++KR
Sbjct: 404 YRTSILGDPVPTDDSGVDKTQEEMMVKEKEIHVMSNRRRKR 444
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 46 SVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
SVN++PL D+ L + E+ T +++KRK + VN E +E +N
Sbjct: 534 SVNERPLKKASKNRDDVKLPSQSGLEEPQTSNRSKRKRKVRKNRSTTVN-ERPVEKAWKN 592
Query: 226 NNV 234
N+
Sbjct: 593 RNI 595
>02_05_0492 -
29476883-29476949,29477030-29477166,29477292-29477383,
29477490-29477587,29477677-29477804,29477883-29478026,
29478108-29478397,29478553-29478739,29479085-29479210,
29480488-29480538,29480952-29481002,29482639-29484054
Length = 928
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 9/87 (10%)
Frame = +1
Query: 31 SKHRLSVNQQPLPDDDSTYDE--------SYLNLRVKQEQTFTIPSAQKKRKKNHKSESV 186
SK R N+ +PD+ + +DE +Y++ +V +F K+RK H+ +
Sbjct: 563 SKEREKENKMVVPDESTIWDEVLEEADELAYVH-KVPPSISFLSAGTGKRRKGEHRLKFS 621
Query: 187 VNSENDIESNTENNN-VIGESNFELVL 264
+ + + N + N IGE V+
Sbjct: 622 IRGSSSVSLNVKTENPYIGEQEVSSVM 648
>02_03_0320 +
17677809-17677929,17678203-17678289,17678657-17678763,
17679903-17679981,17680574-17680754,17681290-17681411,
17681541-17681677
Length = 277
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLP-DDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
E+ +E+ + + SV+ PL + D + S + +K+E+ P + KR+K H+ +
Sbjct: 85 ENSVEVAHPNIKPFSVHPLPLTKNSDVLLESSNGSDSLKEEKNHYYPGKEIKRRKRHRRK 144
Query: 181 SVVNSE 198
V+ E
Sbjct: 145 QYVDQE 150
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 28.7 bits (61), Expect = 2.4
Identities = 21/77 (27%), Positives = 31/77 (40%)
Frame = +1
Query: 31 SKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIE 210
SK+ SV+ + S L+ R Q +P+A RK KS + SE +
Sbjct: 399 SKNTSSVSTEESTVPSSRPARLSLDERASQNGVKKVPAANTVRKPQRKSLPKLPSEQTVT 458
Query: 211 SNTENNNVIGESNFELV 261
ENN + EL+
Sbjct: 459 EQVENNTSATDPVRELI 475
>12_01_0102 - 788403-788937,789051-789164,789323-789687
Length = 337
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 37 HRLSVNQQPLPDDDSTYDESYLNLRVKQEQ 126
H L+ N PDDDS D++ L +KQEQ
Sbjct: 217 HSLTANPNGHPDDDS--DDTILTKMIKQEQ 244
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 136 IPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESN 249
+P + KK+KK + + + E+DIE N + N
Sbjct: 277 VPDSGKKKKKKKAARKMSSDEDDIEVEENEENTDNDGN 314
>08_02_0431 +
17053928-17054189,17054296-17054564,17054661-17054864,
17054974-17055066,17055160-17055255,17055339-17055683,
17055935-17056018,17056106-17056171,17056268-17056333,
17056436-17056501,17056635-17056700,17056798-17056863,
17056981-17057028,17057107-17057169,17057255-17057320,
17057483-17057542,17057888-17057935,17058019-17058255,
17058346-17058366
Length = 741
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/85 (23%), Positives = 30/85 (35%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSES 183
+ D L N H N QP + Y + + + I S KRK N
Sbjct: 445 QQDNSLMNTQSHVHDENLQPPTKHSTVYKNTQSLGQNHSGKQRKITSCANKRKGNLDQNE 504
Query: 184 VVNSENDIESNTENNNVIGESNFEL 258
++ I S +NN + N+ L
Sbjct: 505 LMQPGKSISSAYKNNKPDNQDNYML 529
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 136 IPSAQKKRKKNHKSESVVNSENDIESNTENNNVIG-ESNFEL 258
+P + KK+KK + S + ++E N EN++ G + N EL
Sbjct: 280 VPDSGKKKKKAARKSSSDEDDVEVEENEENSDNEGNDGNEEL 321
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 27.5 bits (58), Expect = 5.6
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 28 NSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDI 207
N K R SV + L D+S+ +E+ R + + + +KKR + +SES SE+++
Sbjct: 190 NDKKR-SVKSK-LSKDESSDEENNEGKRKRHHKKSSRRRRKKKRYSSSESESSSESESEL 247
Query: 208 -ESNTENNNVIGESN 249
+S++E++ +S+
Sbjct: 248 SDSDSESDTCSSDSS 262
>11_01_0730 -
6037375-6037509,6037892-6038019,6038339-6038423,
6038525-6038614,6040015-6040113,6040207-6040335,
6041341-6041463,6041549-6041711,6042331-6042380,
6042593-6042706,6042993-6043199,6043275-6043412,
6044708-6044770,6044845-6044928,6045014-6045094,
6045212-6045363,6045479-6045614,6045991-6046107
Length = 697
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/64 (18%), Positives = 28/64 (43%)
Frame = +1
Query: 43 LSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTE 222
+ +N PLP++D E + + QE+ A +R++ + + + + D S
Sbjct: 1 MDLNASPLPEEDEQPYEQQVEVDFAQEEHVESAVATMRREREERRKKLKREQQDEGSRLH 60
Query: 223 NNNV 234
+ +
Sbjct: 61 SQQI 64
>03_02_0052 +
5285061-5285106,5285711-5285754,5286317-5286539,
5286664-5286827,5286918-5288144
Length = 567
Score = 27.1 bits (57), Expect = 7.4
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 229 CYFQCLTQCHFQNLPQ 182
CY CLT F NLPQ
Sbjct: 486 CYVMCLTDNDFNNLPQ 501
>10_08_0259 +
16274430-16274747,16275180-16275242,16275329-16275424,
16275526-16275618,16276415-16276605,16276684-16276921,
16277805-16277900,16278324-16278404,16278532-16278939,
16279048-16279331,16279460-16279547,16279630-16279830,
16280032-16280118,16280119-16280238,16280536-16280708,
16281914-16282055,16282292-16282414,16282601-16282656,
16282735-16283038,16283154-16283283,16283491-16283549,
16283829-16284061,16285480-16285527,16285765-16285843,
16285925-16286169,16286338-16286722
Length = 1446
Score = 26.6 bits (56), Expect = 9.8
Identities = 15/73 (20%), Positives = 39/73 (53%)
Frame = +1
Query: 31 SKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIE 210
SKH++ + + DD+ +E+ L + +++ + + S Q++ KS ++ S +E
Sbjct: 623 SKHKMKKRIRRIMDDEELGEETKLKIAMEKARQEHLKSMQEQSASKLKSNNIGIS---LE 679
Query: 211 SNTENNNVIGESN 249
+ +E + +G+ +
Sbjct: 680 APSEVSEYVGDGH 692
>07_03_1578 +
27872636-27872840,27872928-27873175,27873215-27873295,
27873665-27873822,27874391-27874450,27874655-27874873,
27875100-27875201,27875352-27875500,27875582-27875734,
27875839-27876194
Length = 576
Score = 26.6 bits (56), Expect = 9.8
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +1
Query: 22 KNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSEN 201
KN++ + + ++ + D +E L+ K T P + K+KK HK E + E
Sbjct: 462 KNDTSAKKNKKKKSKAEADG--EEMDLDKPAKVAAEETDPENENKKKKKHKLEEPQDQEM 519
Query: 202 DIESNTENN 228
+ N E +
Sbjct: 520 AVNGNLEQD 528
>05_07_0143 +
28000038-28000211,28002217-28002230,28002713-28002788,
28003304-28003865,28004476-28004761,28004848-28005118,
28005478-28005633,28005871-28006368,28006809-28007093
Length = 773
Score = 26.6 bits (56), Expect = 9.8
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +1
Query: 76 DSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESNFE 255
DS YD+ L QE + +P +K +H + V S +D+ TEN + N E
Sbjct: 250 DSEYDDGLL-----QESSTYLP-----QKNSHAEDEVEGSNSDVALATENFQGLSLHNEE 299
Query: 256 LV 261
LV
Sbjct: 300 LV 301
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 55 QQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNV 234
Q+ L D D Y S ++ R + I ++K+ H E ++ EN+++ + NNV
Sbjct: 562 QKALSDLDEAY--SAVSERESELSQIEINLHKQKQAMEHLEELKLSMENELKGYMDENNV 619
Query: 235 I 237
+
Sbjct: 620 L 620
>03_02_0056 -
5298807-5300033,5300132-5300298,5300395-5300617,
5303004-5303065,5303180-5303240
Length = 579
Score = 26.6 bits (56), Expect = 9.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 241 HQ*HCYFQCLTQCHFQNLP 185
H CY CLT +F+NLP
Sbjct: 494 HPQGCYVMCLTDNNFKNLP 512
>01_01_1098 -
8691312-8692430,8692640-8693509,8694522-8696105,
8696199-8696258,8696336-8696414,8696494-8696555,
8697129-8697204,8697367-8697419,8698181-8698270,
8698411-8698458
Length = 1346
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 148 QKKRKKNHKSESVVNSENDIESNTENNNV 234
++K K+N++ SEND E ENN++
Sbjct: 357 REKDKENYRRHPTEASENDTEVKIENNDM 385
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,069,974
Number of Sequences: 37544
Number of extensions: 91404
Number of successful extensions: 380
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 378
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 931320312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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