Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30112
(464 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06) 31 0.47
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.47
SB_19726| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.62
SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3) 29 2.5
SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_3403| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35) 28 3.3
SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0) 28 3.3
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.3
SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14) 28 3.3
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 28 3.3
SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17) 28 3.3
SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0) 28 4.4
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 28 4.4
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 28 4.4
SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15) 27 5.8
SB_48826| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6) 27 5.8
SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.8
SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56) 27 7.7
SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08) 27 7.7
SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.7
>SB_18982| Best HMM Match : M (HMM E-Value=1.1e-06)
Length = 825
Score = 31.1 bits (67), Expect = 0.47
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 1 PESDIEL-KNNSKHRLSV---NQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKN 168
PE E+ K + K RL +Q L +D ++ L+ + + + + Q +R N
Sbjct: 179 PEQPEEMSKEDLKARLEALENEKQELLEDKKDLNDEIKFLKYQLQYRLEVQNLQSERDMN 238
Query: 169 HKSESVVNSENDIESNTENNNVIGE 243
+SES V EN+ ++ E N + E
Sbjct: 239 QQSESHVKLENENKALREENKDLKE 263
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 31.1 bits (67), Expect = 0.47
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Frame = +1
Query: 1 PESDIEL-KNNSKHRLSV---NQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKN 168
PE E+ K + K RL +Q L +D ++ L+ + + + + Q +R N
Sbjct: 157 PEQPEEMSKEDLKARLEALENEKQELLEDKKDLNDEIKFLKYQLQYRLEVQNLQSERDMN 216
Query: 169 HKSESVVNSENDIESNTENNNVIGE 243
+SES V EN+ ++ E N + E
Sbjct: 217 QQSESHVKLENENKALREENKDLKE 241
>SB_19726| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 30.7 bits (66), Expect = 0.62
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 55 QQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHK-SESVVNSENDIESNTENNN 231
QQ + D+ T + N + E++F + KK+ + + S+ ++N + N N+N
Sbjct: 21 QQIIKPDNKTRCQGLNNALFRNEKSFRLWEIVKKKTETRRISKQTSQTQNQLRYNDNNSN 80
Query: 232 VIGESN 249
+ G N
Sbjct: 81 INGNVN 86
>SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3)
Length = 258
Score = 28.7 bits (61), Expect = 2.5
Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDE---SYLNLRVKQEQTFTIPSAQKKRKKNH 171
P S +E + HR S+ + LP+++ + S N+R K E+ +++ R KN
Sbjct: 168 PPSRLENNLSGNHRSSIKFEHLPEENESSPSDFASLTNIRPK-EELLPESASESNRSKNK 226
Query: 172 KSESVVNSENDI 207
+ + N I
Sbjct: 227 REDETPNKTRKI 238
>SB_30481| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/74 (20%), Positives = 31/74 (41%)
Frame = +1
Query: 28 NSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDI 207
N+++ N + + ++ Y+ Y + + + + N + + N+E +
Sbjct: 38 NTEYNTEYNNEYNTEYNTEYNTDYTEYNTEYNTEYNTEHTEYNTEYNTEYNTEYNTEYNT 97
Query: 208 ESNTENNNVIGESN 249
E NTE NN E N
Sbjct: 98 EYNTEYNNEYTEYN 111
>SB_3403| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/48 (27%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Frame = +1
Query: 97 YLNLRVKQEQTFTIPSAQKK---RKKNHKSESVVNSENDIESNTENNN 231
+LN+ +++E F A+ + R N+ + + N++ND +++ +NNN
Sbjct: 22 WLNVLIQKEVGFIFSKAESQVFTRLNNNNNNNNNNNDNDNDNDNDNNN 69
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 148 QKKRKKNHKSESVVNSENDIESNTENNN 231
QKK+KK K E ++ ND +++ +N+N
Sbjct: 3125 QKKKKKKKKEEKKNDNNNDNDNDNDNDN 3152
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/28 (32%), Positives = 21/28 (75%)
Frame = +1
Query: 148 QKKRKKNHKSESVVNSENDIESNTENNN 231
+KK+KK + ++ N++ND +++ +N+N
Sbjct: 3127 KKKKKKKEEKKNDNNNDNDNDNDNDNDN 3154
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 6/42 (14%)
Frame = +1
Query: 151 KKRKKNHKSESVV---NSENDI---ESNTENNNVIGESNFEL 258
KK KK +K + V+ +SE+D E+N +NNN G+ N+++
Sbjct: 442 KKVKKTNKKDEVIMKKDSEDDERSEEANDDNNNDDGDDNYDV 483
>SB_51594| Best HMM Match : p450 (HMM E-Value=3.5e-35)
Length = 1208
Score = 28.3 bits (60), Expect = 3.3
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPDDDSTYD-ESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
ES + +N + RL+ + D + D + + V + P + + +++ +S
Sbjct: 8 ESALLTRNTKRRRLARLESLSSDSEGELDLDINSRISVTKRNLVKTPKTESQIRRSKRSN 67
Query: 181 SVVNSENDIESNTENNN 231
+SE+D E N NN+
Sbjct: 68 LKSSSESDNEDNYSNNS 84
>SB_32529| Best HMM Match : Laminin_G_2 (HMM E-Value=0)
Length = 1841
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPD-DDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
+ D E NNS + + DD+ +ES N ++Q +AQ ++ + +
Sbjct: 1544 DDDDERNNNSNKTMDYDNNSNDGVDDNNENESRNNNDANKQQQTPAATAQTRQGRVQNNR 1603
Query: 181 SVVNSENDIESNTENNN 231
+ N E+D + NN+
Sbjct: 1604 NNNNDEDDDDDERNNNS 1620
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/73 (19%), Positives = 37/73 (50%)
Frame = +1
Query: 40 RLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNT 219
++ V ++ DD+ ++ ++ QE ++ K+++ + ESV N E +++S++
Sbjct: 124 KVPVGEEDDGDDNGAEEDVTNEKQINQENVDKSSISEDKKEEGGEKESVTNLEKNLQSSS 183
Query: 220 ENNNVIGESNFEL 258
+ + N E+
Sbjct: 184 ASGADQNDQNREV 196
>SB_34069| Best HMM Match : ARID (HMM E-Value=4.8e-14)
Length = 1774
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +1
Query: 85 YDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESNFEL 258
YD++Y R + +P + R + HK ES +S D T + I +N E+
Sbjct: 640 YDQAYRYRRPRGGARLLLPYERYVRGQLHKPESSPSSPEDYPDPTNTQSTIENNNNEV 697
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 28.3 bits (60), Expect = 3.3
Identities = 10/43 (23%), Positives = 25/43 (58%)
Frame = +1
Query: 100 LNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENN 228
++L ++E+ +A+++ KK K + + + D+E+ +NN
Sbjct: 714 IDLEKEREELKKAAAARRRDKKKQKKKKKLTQDKDVETENKNN 756
>SB_22391| Best HMM Match : C1_1 (HMM E-Value=3.6e-17)
Length = 103
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +1
Query: 40 RLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESV 186
+LSV+ L D++ DES N+ K++ T A+ K + K E V
Sbjct: 3 KLSVSDVDLQDEEYDDDESLTNIYDKRQSVITSAMAKPKTTRAAKHEFV 51
>SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0)
Length = 603
Score = 27.9 bits (59), Expect = 4.4
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 7 SDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESV 186
S +++ +N LS + DDD+ D S + +Q + K KKN ES
Sbjct: 236 SSMKIHDNDDLDLSDDDDDNDDDDNEDDNSVKKEKKTGQQNKKKGKSASKAKKNSDDESE 295
Query: 187 VNSEN 201
+SE+
Sbjct: 296 ASSED 300
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 112 VKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESNFE 255
V QE FT+ K +K + K ++ +D+E N + + GE +E
Sbjct: 315 VHQELQFTMSGLVKAKKYDWKDSNLALFGSDLEKNVKKESAEGEPAWE 362
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 27.9 bits (59), Expect = 4.4
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +1
Query: 22 KNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSEN 201
+NNS N + D + Y E+ + + E + K KN ++S V E+
Sbjct: 719 QNNSGRFYENNSSSI--DYNVYGETINDASIGAEMAKQSDGSADKHSKNATTDSHVAIES 776
Query: 202 DIESNTENNNVI 237
+ TEN NVI
Sbjct: 777 ESPDVTENKNVI 788
>SB_50209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 27.5 bits (58), Expect = 5.8
Identities = 16/82 (19%), Positives = 36/82 (43%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSES 183
E++ NN+ + + N +++ ++ S N + K ++ E+
Sbjct: 291 ENNNNNSNNNDNNSNSNNNDNNSNNNDFNNSNRNDHNVDNNSHNNDEKNKSNSNDNNDEN 350
Query: 184 VVNSENDIESNTENNNVIGESN 249
N+ N+ +SN ++NN +SN
Sbjct: 351 NNNNSNNKDSNNKSNNNDNKSN 372
>SB_12412| Best HMM Match : Kinesin (HMM E-Value=6.3e-15)
Length = 1001
Score = 27.5 bits (58), Expect = 5.8
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = +1
Query: 7 SDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSES 183
+DIE+K L + Q + S Y+E + L K ++T K K H SES
Sbjct: 649 TDIEIKQKLIEELEIAQNKIQTMRSQYEEKLVLLTHKIKETEEERDHVLKNIKEHDSES 707
>SB_48826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 27.5 bits (58), Expect = 5.8
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = +1
Query: 115 KQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESN 249
+Q+Q Q++++ N + S +N+ N SN NNN +N
Sbjct: 46 QQQQQQQQQQQQQQQQHNLSNSSDINNNNTTTSNNNNNNNNNNNN 90
>SB_17427| Best HMM Match : ResIII (HMM E-Value=0.6)
Length = 486
Score = 27.5 bits (58), Expect = 5.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 115 KQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNT 219
K+ +T PS K+KKN+K +SV E + NT
Sbjct: 43 KRSETSKAPSVSPKKKKNNKGKSVEIKE--VSENT 75
>SB_8090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 178
Score = 27.5 bits (58), Expect = 5.8
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 22 KNNSKHRLSVNQQPLPDDDST--YDESYLN----LRVKQEQTFTIPSAQKKRKKNHKSE- 180
KNNS + N+ DD+++ DE+ +N ++ T + N+ ++
Sbjct: 70 KNNSDSDYNNNKDNNNDDENSNSIDENSINNSQGCNNNNDKVVTTQQCKDDNNNNNGNKN 129
Query: 181 SVVNSENDIESNTENNNVIGESN 249
S NS++D +N +NNN SN
Sbjct: 130 SKNNSDSDYNNNKDNNNDDENSN 152
>SB_43991| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 27.1 bits (57), Expect = 7.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFT 135
K ++ VN D+STY + Y +K E+ FT
Sbjct: 302 KMKIKVNYVAAVQDESTYSQFYNENNLKYEEEFT 335
>SB_16757| Best HMM Match : S-antigen (HMM E-Value=0.56)
Length = 1566
Score = 27.1 bits (57), Expect = 7.7
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 70 DDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGES 246
DD+ YDE ++ R + Q+ + + + + +H+ + SEN ES+ + N + +S
Sbjct: 968 DDNKHYDERDVHKRAESRQSLQCWADECRSQHSHRRLGIA-SENVTESSELSENELTDS 1025
>SB_59437| Best HMM Match : AAA (HMM E-Value=7.4e-08)
Length = 568
Score = 27.1 bits (57), Expect = 7.7
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +1
Query: 109 RVKQEQTFTIPSAQKKRKKNHKS 177
++KQE+T PS+ +K+K ++S
Sbjct: 63 KIKQEETIATPSSLEKKKSGYRS 85
>SB_1065| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.1 bits (57), Expect = 7.7
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 70 DDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNN 231
DDD D+ ++ + T + R+++H + N++ND +N NNN
Sbjct: 80 DDDDDDDDD--DMMMVMMMIHTGHQQHRDRQEDHGVQEDPNNDNDNNNNNNNNN 131
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,889,526
Number of Sequences: 59808
Number of extensions: 130885
Number of successful extensions: 722
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 957531822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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