Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30112
(464 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111530-1|AAI11531.1| 1196|Homo sapiens CMYA5 protein protein. 32 1.1
BC062664-1|AAH62664.1| 369|Homo sapiens CMYA5 protein protein. 32 1.1
AL834252-1|CAD38928.2| 1332|Homo sapiens hypothetical protein pr... 32 1.1
AL832368-1|CAD91158.1| 1163|Homo sapiens hypothetical protein pr... 32 1.1
AL831966-1|CAD38607.1| 1470|Homo sapiens hypothetical protein pr... 32 1.1
BC045639-1|AAH45639.2| 644|Homo sapiens SUMO1/sentrin specific ... 31 2.6
AF149770-1|AAF31171.1| 643|Homo sapiens sentrin/SUMO-specific p... 31 2.6
BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 4.5
BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 4.5
BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 4.5
BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like fami... 30 4.5
X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associa... 29 6.0
X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein. 29 6.0
CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein. 29 6.0
BT007097-1|AAP35761.1| 517|Homo sapiens general transcription f... 29 6.0
BC013007-1|AAH13007.1| 517|Homo sapiens general transcription f... 29 6.0
BC000120-1|AAH00120.1| 517|Homo sapiens general transcription f... 29 6.0
BC020647-1|AAH20647.1| 241|Homo sapiens coiled-coil domain cont... 29 7.9
AF213377-1|AAG43569.1| 241|Homo sapiens BR22 TTF-1 associated p... 29 7.9
>BC111530-1|AAI11531.1| 1196|Homo sapiens CMYA5 protein protein.
Length = 1196
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+ + S PLPDD T + L+ + E P + K+K+ HK++ ++++++ +
Sbjct: 108 EEKASFKTIPLPDDSETV-ACHKTLKSRLEDEKVTPLKENKQKETHKTKEEISTDSETDL 166
Query: 214 NTENNNVIGESNF 252
+ + E ++
Sbjct: 167 SFIQPTIPSEEDY 179
>BC062664-1|AAH62664.1| 369|Homo sapiens CMYA5 protein protein.
Length = 369
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+ + S PLPDD T + L+ + E P + K+K+ HK++ ++++++ +
Sbjct: 228 EEKASFKTIPLPDDSETV-ACHKTLKSRLEDEKVTPLKENKQKETHKTKEEISTDSETDL 286
Query: 214 NTENNNVIGESNF 252
+ + E ++
Sbjct: 287 SFIQPTIPSEEDY 299
>AL834252-1|CAD38928.2| 1332|Homo sapiens hypothetical protein
protein.
Length = 1332
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+ + S PLPDD T + L+ + E P + K+K+ HK++ ++++++ +
Sbjct: 244 EEKASFKTIPLPDDSETV-ACHKTLKSRLEDEKVTPLKENKQKETHKTKEEISTDSETDL 302
Query: 214 NTENNNVIGESNF 252
+ + E ++
Sbjct: 303 SFIQPTIPSEEDY 315
>AL832368-1|CAD91158.1| 1163|Homo sapiens hypothetical protein
protein.
Length = 1163
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+ + S PLPDD T + L+ + E P + K+K+ HK++ ++++++ +
Sbjct: 75 EEKASFKTIPLPDDSETV-ACHKTLKSRLEDEKVTPLKENKQKETHKTKEEISTDSETDL 133
Query: 214 NTENNNVIGESNF 252
+ + E ++
Sbjct: 134 SFIQPTIPSEEDY 146
>AL831966-1|CAD38607.1| 1470|Homo sapiens hypothetical protein
protein.
Length = 1470
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/73 (20%), Positives = 36/73 (49%)
Frame = +1
Query: 34 KHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+ + S PLPDD T + L+ + E P + K+K+ HK++ ++++++ +
Sbjct: 382 EEKASFKTIPLPDDSETV-ACHKTLKSRLEDEKVTPLKENKQKETHKTKEEISTDSETDL 440
Query: 214 NTENNNVIGESNF 252
+ + E ++
Sbjct: 441 SFIQPTIPSEEDY 453
>BC045639-1|AAH45639.2| 644|Homo sapiens SUMO1/sentrin specific
peptidase 1 protein.
Length = 644
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 52 NQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTE 222
NQ+ + S +D L+LRV E+ + Q+ +KK HK + +SE++ TE
Sbjct: 372 NQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQETQKKGHK---LTDSEDEFPEITE 425
>AF149770-1|AAF31171.1| 643|Homo sapiens sentrin/SUMO-specific
protease protein.
Length = 643
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +1
Query: 52 NQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTE 222
NQ+ + S +D L+LRV E+ + Q+ +KK HK + +SE++ TE
Sbjct: 372 NQRLQEREHSVHDSVELHLRVPLEKEIPVTVVQETQKKGHK---LTDSEDEFPEITE 425
>BC101073-1|AAI01074.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 275 LVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 99
L+ + ++ ++ T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 582 LMVTTPATTTNTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101072-1|AAI01073.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 275 LVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 99
L+ + ++ ++ T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 582 LMVTTPATTTNTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101071-1|AAI01072.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 275 LVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 99
L+ + ++ ++ T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 582 LMVTTPATTTNTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>BC101070-1|AAI01071.1| 841|Homo sapiens SLIT and NTRK-like family,
member 6 protein.
Length = 841
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = -1
Query: 275 LVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFFFLFFCADGIVNVCSCFTRRFK 99
L+ + ++ ++ T+L S+ D++ S L+ F + FCA GIV + RR+K
Sbjct: 582 LMVTTPATTTNTADTILRSLTDAVPLSVLILGLLIMFITIVFCAAGIVVLVLHRRRRYK 640
>X64037-1|CAA45408.1| 517|Homo sapiens RNA polymerase II associated
protein RAP74 protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>X64002-1|CAA45404.1| 517|Homo sapiens RAP74 protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>CR456798-1|CAG33079.1| 517|Homo sapiens GTF2F1 protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>BT007097-1|AAP35761.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>BC013007-1|AAH13007.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>BC000120-1|AAH00120.1| 517|Homo sapiens general transcription
factor IIF, polypeptide 1, 74kDa protein.
Length = 517
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +1
Query: 1 PESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
PES + + V++Q ++S ++ + ++E+ +KKR+K+ E
Sbjct: 285 PESKAKAPQQEEGPKGVDEQSDSSEESEEEKPPEEDKEEEEEKKAPTPQEKKRRKDSSEE 344
Query: 181 SVVNSENDIESNTEN 225
S + E+DI+S +
Sbjct: 345 SDSSEESDIDSEASS 359
>BC020647-1|AAH20647.1| 241|Homo sapiens coiled-coil domain
containing 59 protein.
Length = 241
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 58 QPLPDDDSTYDESYLNLR-VKQEQTFTIPSAQKKRKKNHKSE 180
+PL +D ++D+ + +K +FTIP KK+ N K++
Sbjct: 132 EPLFEDQCSFDQPQPEEQCIKTVNSFTIPKKNKKKTSNQKAQ 173
>AF213377-1|AAG43569.1| 241|Homo sapiens BR22 TTF-1 associated
protein protein.
Length = 241
Score = 29.1 bits (62), Expect = 7.9
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +1
Query: 58 QPLPDDDSTYDESYLNLR-VKQEQTFTIPSAQKKRKKNHKSE 180
+PL +D ++D+ + +K +FTIP KK+ N K++
Sbjct: 132 EPLFEDQCSFDQPQPEEQCIKTVNSFTIPKKNKKKTSNQKAQ 173
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,955,830
Number of Sequences: 237096
Number of extensions: 557489
Number of successful extensions: 2060
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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