Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30112
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82090-5|CAB05009.1| 159|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 29 1.6
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.6
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 29 1.6
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 29 1.6
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.6
Z50794-1|CAA90656.2| 179|Caenorhabditis elegans Hypothetical pr... 29 2.2
U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily ass... 29 2.2
AF303254-1|AAG50212.1| 179|Caenorhabditis elegans XL153 protein. 29 2.2
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 29 2.2
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 29 2.2
Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical pr... 28 3.8
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical pr... 23 5.6
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 27 6.6
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical... 27 6.6
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 27 6.6
U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical p... 27 8.8
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 27 8.8
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 27 8.8
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 27 8.8
>Z82090-5|CAB05009.1| 159|Caenorhabditis elegans Hypothetical
protein ZK337.4 protein.
Length = 159
Score = 31.5 bits (68), Expect = 0.31
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 64 LPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNN 231
L DDD Y+E V++ T + +KK ++N +E +ND + NNN
Sbjct: 59 LLDDDMGYEEPENEANVRENGGET-ENVEKKLEENKDNEGAAEEQNDQQKKEVNNN 113
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 7 SDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQ 126
S++ ++++ HRL+VNQ +PD S+ E +L +QE+
Sbjct: 344 SNVNIESHDMHRLNVNQS-MPDRRSSQIEEIKSLLEEQEE 382
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 136 IPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESNFE 255
+P Q K +E VV+ E+D E TE+N + N E
Sbjct: 683 MPHPQPDEKMETSTEGVVDEESDEERTTESNEEVVTKNAE 722
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 7 SDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQ 126
S++ ++++ HRL+VNQ +PD S+ E +L +QE+
Sbjct: 344 SNVNIESHDMHRLNVNQS-MPDRRSSQIEEIKSLLEEQEE 382
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 29.1 bits (62), Expect = 1.6
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 70 DDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTE 222
DD ++ DE+ NL K+ Q + K+KK K + + +IE+ E
Sbjct: 5 DDYNSDDEANKNLSKKELQELKRKQQKSKKKKESKKRAKATKQAEIETREE 55
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 136 IPSAQKKRKKNHKSESVVNSENDIESNTENNNVIGESNFE 255
+P Q K +E VV+ E+D E TE+N + N E
Sbjct: 683 MPHPQPDEKMETSTEGVVDEESDEERTTESNEEVVTKNAE 722
>Z50794-1|CAA90656.2| 179|Caenorhabditis elegans Hypothetical
protein F59F5.2 protein.
Length = 179
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 281 ICLVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFF 162
+ L+ +STS K PIT + S F ++S S+F + L+ F
Sbjct: 83 LILLYRSTSEKTKDPITEMSSQFGTISISKFYHNYLVLVF 122
>U64862-6|AAB52623.3| 560|Caenorhabditis elegans Temporarily
assigned gene nameprotein 226 protein.
Length = 560
Score = 28.7 bits (61), Expect = 2.2
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 142 SAQKKRKKNHKSESVVNSENDIESNTENNN 231
S + KRK+N+K + +N+ +S+ EN N
Sbjct: 511 SEKNKRKRNNKKNKKIEQKNEQKSSGENGN 540
>AF303254-1|AAG50212.1| 179|Caenorhabditis elegans XL153 protein.
Length = 179
Score = 28.7 bits (61), Expect = 2.2
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -1
Query: 281 ICLVTQSTSSKLDSPITLLFSVFDSMSFSEFTTDSLLWFF 162
+ L+ +STS K PIT + S F ++S S+F + L+ F
Sbjct: 83 LILLYRSTSEKTKDPITEMSSQFGTISISKFYHNYLVLVF 122
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +1
Query: 46 SVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
+V Q PD D+ YD +L+ Q+Q P+ + + ++ ++N ++ N
Sbjct: 389 TVTVQSDPDLDTDYDNLIQSLKELQDQAIVRPANHSSNRLSEETRKLLNKRRFMDRNDPQ 448
Query: 226 NNVIGESNFELV 261
I + E V
Sbjct: 449 FKSISDKCREAV 460
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 28.7 bits (61), Expect = 2.2
Identities = 16/72 (22%), Positives = 31/72 (43%)
Frame = +1
Query: 46 SVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
+V Q PD D+ YD +L+ Q+Q P+ + + ++ ++N ++ N
Sbjct: 128 TVTVQSDPDLDTDYDNLIQSLKELQDQAIVRPANHSSNRLSEETRKLLNKRRFMDRNDPQ 187
Query: 226 NNVIGESNFELV 261
I + E V
Sbjct: 188 FKSISDKCREAV 199
>Z81143-5|CAB03518.2| 370|Caenorhabditis elegans Hypothetical
protein ZK265.7 protein.
Length = 370
Score = 28.3 bits (60), Expect = 2.9
Identities = 15/65 (23%), Positives = 31/65 (47%)
Frame = +1
Query: 61 PLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNNVIG 240
PLP+DD + D+++ R K E+ + +R + ++ + NDI +++ +
Sbjct: 233 PLPNDDISLDDTFEETRRKLEKEM---KEENERLREMLADEEEENSNDISDIDDDDGITA 289
Query: 241 ESNFE 255
E E
Sbjct: 290 EEQRE 294
>Z72508-8|CAA96640.2| 366|Caenorhabditis elegans Hypothetical
protein F28H7.9 protein.
Length = 366
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Frame = +1
Query: 73 DDSTYDESYLNLRV--KQEQTFTIPSAQKKRKKNHKSESVVNSENDI 207
++ Y + + +V Q Q A KK KK H+S S NSE++I
Sbjct: 318 EEMNYSDKNIESKVYFDQLQRNLTEEAMKKSKKKHRSSSWNNSEHEI 364
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 27.5 bits (58), Expect = 5.0
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 103 NLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIES 213
+LRV+ TF I +A KRK + +V NS ++++S
Sbjct: 41 SLRVQLNGTFEIGNAFSKRKFKNWQRAVKNSSSNVKS 77
>Z71262-4|CAA95814.1| 775|Caenorhabditis elegans Hypothetical
protein F22D6.5 protein.
Length = 775
Score = 23.4 bits (48), Expect(2) = 5.6
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 154 KRKKNHKSESVVNSEND 204
K++K HK E V END
Sbjct: 61 KKEKKHKREKEVEMEND 77
Score = 22.2 bits (45), Expect(2) = 5.6
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = +1
Query: 37 HRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSE 180
+R+ + + D ++ DE + V++ Q + K +KK HK E
Sbjct: 4 NRVEEDGEVKSDVGTSSDEKASDSEVEKRQRTDSERSGKDKKKKHKKE 51
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPDDDSTYDES 96
ESD E++ K+ L+ Q L DD++ +D +
Sbjct: 12 ESDEEMETQQKNSLAPQNQQLVDDEAFFDNT 42
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 27.1 bits (57), Expect = 6.6
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +1
Query: 46 SVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 225
S N P ++T S+ + + E +K+ KNH SE+D S TEN
Sbjct: 336 SENNATQPASETTRKHSFEMVGDEDEDGINTFLGEKQETKNHGVTKPKQSESD--SETEN 393
Query: 226 NNV 234
N V
Sbjct: 394 NMV 396
>AL117207-17|CAI79269.1| 421|Caenorhabditis elegans Hypothetical
protein Y60A3A.25 protein.
Length = 421
Score = 27.1 bits (57), Expect = 6.6
Identities = 15/82 (18%), Positives = 38/82 (46%)
Frame = +1
Query: 7 SDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSESV 186
+D +N +++Q + + +S ++ + K+ + S KK++ ++E+
Sbjct: 169 NDDNFNDNFTEDDAISQISFDSEIKSETDSMVSRKRKRNREDAQNSYDKKKRIRDENETF 228
Query: 187 VNSENDIESNTENNNVIGESNF 252
S+ N N N++ E++F
Sbjct: 229 FKSQKLTHENLLNQNILNEAHF 250
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.1 bits (57), Expect = 6.6
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 4 ESDIELKNNSKHRLSVNQQPLPDDDSTYDESYLNLRVKQEQTFTIPSAQKKRKKNHKSES 183
+SD + K K++ +++ DDS+ D+S + R K+ + KK KK KSE
Sbjct: 226 DSDFDKKKWKKNKAKRSKR----DDSSDDDSEMERRRKKSK------KSKKSKKFKKSEK 275
Query: 184 VVNSENDIESNTEN 225
+ ND S+ E+
Sbjct: 276 RKRAVNDSSSDDED 289
>U80444-11|AAB37793.2| 304|Caenorhabditis elegans Hypothetical
protein F26B1.1 protein.
Length = 304
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +1
Query: 115 KQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTENNN 231
K+E + QKK+K K + V S+ D+E + +++N
Sbjct: 60 KEEDCDSESIKQKKKKARVKKKEVRKSKKDVEDDEDDSN 98
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 124 QTFTIPSAQKKRKKNHKSE--SVVNSENDIESNTENNNVIG 240
+T+T PS+ +K K H++E S ++ E+D ES+ N IG
Sbjct: 206 KTYTHPSSLRKHTKVHENEKKSQLSPEHD-ESSDSGNASIG 245
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 124 QTFTIPSAQKKRKKNHKSE--SVVNSENDIESNTENNNVIG 240
+T+T PS+ +K K H++E S ++ E+D ES+ N IG
Sbjct: 219 KTYTHPSSLRKHTKVHENEKKSQLSPEHD-ESSDSGNASIG 258
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 26.6 bits (56), Expect = 8.8
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Frame = +1
Query: 124 QTFTIPSAQKKRKKNHKSE--SVVNSENDIESNTENNNVIG 240
+T+T PS+ +K K H++E S ++ E+D ES+ N IG
Sbjct: 207 KTYTHPSSLRKHTKVHENEKKSQLSPEHD-ESSDSGNASIG 246
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,076,891
Number of Sequences: 27780
Number of extensions: 106512
Number of successful extensions: 677
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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