Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30111
         (706 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr...    29   4.3  
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ...    29   4.3  
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ...    29   4.3  
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote...    29   4.3  
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote...    29   4.3  
U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical pr...    28   7.5  

>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
            ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
            ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
            ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
            ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
            protein ZK1151.1c protein.
          Length = 4955

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
            protein ZK1151.1b protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
            protein.
          Length = 3522

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
            protein.
          Length = 4944

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
 Frame = -1

Query: 700  KVVEKFRPKPK---KRRLELFQLEWPNGLLILTLQ*SLVSKHG 581
            KV E+ + KP    K++LEL   +WP  L     +  LVSK G
Sbjct: 2409 KVAEELKKKPDAELKKKLELLYQKWPKALGAARDRKDLVSKAG 2451


>U88169-5|AAB42235.2|  367|Caenorhabditis elegans Hypothetical
           protein T03F1.7 protein.
          Length = 367

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -2

Query: 702 GKLWKSSGPSPKSVDWSFSN 643
           G +WK+    P+SVDW  SN
Sbjct: 113 GDIWKNETARPESVDWHDSN 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,028,346
Number of Sequences: 27780
Number of extensions: 252795
Number of successful extensions: 526
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)