Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30110
(740 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096752-1|AAH96752.1| 105|Homo sapiens CTBS protein protein. 32 2.5
BC024007-1|AAH24007.2| 105|Homo sapiens CTBS protein protein. 32 2.5
M95767-1|AAA35684.1| 385|Homo sapiens di-N-acetylchitobiase pro... 31 3.3
BC126335-1|AAI26336.1| 385|Homo sapiens chitobiase, di-N-acetyl... 31 3.3
BC126333-1|AAI26334.1| 385|Homo sapiens chitobiase, di-N-acetyl... 31 3.3
AL359762-6|CAH70207.1| 385|Homo sapiens chitobiase, di-N-acetyl... 31 3.3
AF085706-1|AAC35852.1| 385|Homo sapiens lysosomal di-N-acetylch... 31 3.3
AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated prot... 31 3.3
AK097359-1|BAC05016.1| 469|Homo sapiens protein ( Homo sapiens ... 31 5.7
BC111748-1|AAI11749.1| 1007|Homo sapiens roundabout homolog 4, m... 30 7.6
BC111562-1|AAI11563.1| 1007|Homo sapiens roundabout homolog 4, m... 30 7.6
BC039602-1|AAH39602.1| 1007|Homo sapiens roundabout homolog 4, m... 30 7.6
AY358083-1|AAQ88450.1| 1004|Homo sapiens magic roundabout protein. 30 7.6
AK074163-1|BAB84989.1| 702|Homo sapiens FLJ00236 protein protein. 30 7.6
AK027852-1|BAB55411.1| 792|Homo sapiens protein ( Homo sapiens ... 30 7.6
AK000805-1|BAA91382.1| 417|Homo sapiens protein ( Homo sapiens ... 30 7.6
AF361473-1|AAL31867.1| 1007|Homo sapiens magic roundabout protein. 30 7.6
>BC096752-1|AAH96752.1| 105|Homo sapiens CTBS protein protein.
Length = 105
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 333 SQPSVTPRCLPAKTSPLGQSYCTDCPCHIPNTCRSICHRPLF 208
S PS P L + TDCPC P CR I H P F
Sbjct: 14 SPPSGVPGLALLALLALRLAAGTDCPCPEPELCRPIRHHPDF 55
>BC024007-1|AAH24007.2| 105|Homo sapiens CTBS protein protein.
Length = 105
Score = 31.9 bits (69), Expect = 2.5
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -3
Query: 333 SQPSVTPRCLPAKTSPLGQSYCTDCPCHIPNTCRSICHRPLF 208
S PS P L + TDCPC P CR I H P F
Sbjct: 14 SPPSGVPGLALLALLALRLAAGTDCPCPEPELCRPIRHHPDF 55
>M95767-1|AAA35684.1| 385|Homo sapiens di-N-acetylchitobiase
protein.
Length = 385
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 267 TDCPCHIPNTCRSICHRPLF 208
TDCPC P CR I H P F
Sbjct: 39 TDCPCPEPELCRPIRHHPDF 58
>BC126335-1|AAI26336.1| 385|Homo sapiens chitobiase, di-N-acetyl-
protein.
Length = 385
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 267 TDCPCHIPNTCRSICHRPLF 208
TDCPC P CR I H P F
Sbjct: 39 TDCPCPEPELCRPIRHHPDF 58
>BC126333-1|AAI26334.1| 385|Homo sapiens chitobiase, di-N-acetyl-
protein.
Length = 385
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 267 TDCPCHIPNTCRSICHRPLF 208
TDCPC P CR I H P F
Sbjct: 39 TDCPCPEPELCRPIRHHPDF 58
>AL359762-6|CAH70207.1| 385|Homo sapiens chitobiase, di-N-acetyl-
protein.
Length = 385
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 267 TDCPCHIPNTCRSICHRPLF 208
TDCPC P CR I H P F
Sbjct: 39 TDCPCPEPELCRPIRHHPDF 58
>AF085706-1|AAC35852.1| 385|Homo sapiens lysosomal
di-N-acetylchitobiase precursor protein.
Length = 385
Score = 31.5 bits (68), Expect = 3.3
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -3
Query: 267 TDCPCHIPNTCRSICHRPLF 208
TDCPC P CR I H P F
Sbjct: 39 TDCPCPEPELCRPIRHHPDF 58
>AB076364-1|BAD01551.1| 245|Homo sapiens keratin associated protein
protein.
Length = 245
Score = 31.5 bits (68), Expect = 3.3
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -3
Query: 324 SVTPRCLPAKTSPLGQSYCTDCPCH----IPNTCRSICHRPLF*LWSCTGP 184
S TP C + S + CT PC +P C+++C +P+ + C GP
Sbjct: 79 SCTPSC--CQQSSCQPACCTSSPCQQACCVPVCCKTVCCKPVCCMPVCCGP 127
>AK097359-1|BAC05016.1| 469|Homo sapiens protein ( Homo sapiens
cDNA FLJ40040 fis, clone SYNOV2000426, highly similar to
Homo sapiens mRNA for immunoglobulin lambda heavy chain.
).
Length = 469
Score = 30.7 bits (66), Expect = 5.7
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -1
Query: 632 CQYRLQDLPKGTLPFGSSLQRGCF*QPSTFSGQSQEW 522
CQ RL + G +P G S + C TF G S W
Sbjct: 19 CQVRLDESGGGLVPPGGSQRLSCVASGFTFGGHSMSW 55
>BC111748-1|AAI11749.1| 1007|Homo sapiens roundabout homolog 4,
magic roundabout (Drosophila) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 534 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 589
>BC111562-1|AAI11563.1| 1007|Homo sapiens roundabout homolog 4,
magic roundabout (Drosophila) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 534 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 589
>BC039602-1|AAH39602.1| 1007|Homo sapiens roundabout homolog 4,
magic roundabout (Drosophila) protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 534 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 589
>AY358083-1|AAQ88450.1| 1004|Homo sapiens magic roundabout protein.
Length = 1004
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 531 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 586
>AK074163-1|BAB84989.1| 702|Homo sapiens FLJ00236 protein protein.
Length = 702
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 424 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 479
>AK027852-1|BAB55411.1| 792|Homo sapiens protein ( Homo sapiens
cDNA FLJ14946 fis, clone PLACE2000034, weakly similar to
LAR PROTEIN PRECURSOR (EC 3.1.3.48). ).
Length = 792
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 534 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 589
>AK000805-1|BAA91382.1| 417|Homo sapiens protein ( Homo sapiens
cDNA FLJ20798 fis, clone ADSU02031. ).
Length = 417
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 18 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 73
>AF361473-1|AAL31867.1| 1007|Homo sapiens magic roundabout protein.
Length = 1007
Score = 30.3 bits (65), Expect = 7.6
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 431 GQRYRTASRSAPCRLG-DLSEPSGTRSNLTSKGNRSPQSPLVVCPQKQVHWGSRIVPI 261
G R ++S S RLG D +P R +L S +RSP PL+ P +GS I +
Sbjct: 534 GSRDLSSSSSLSSRLGADARDPLDCRRSLLSWDSRSPGVPLL--PDTSTFYGSLIAEL 589
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,183,776
Number of Sequences: 237096
Number of extensions: 2678746
Number of successful extensions: 7657
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7646
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8847149012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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