Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30110
         (740 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z81485-6|CAB03979.1|  784|Caenorhabditis elegans Hypothetical pr...    29   4.6  
AC084153-13|AAK84583.1|  123|Caenorhabditis elegans Hypothetical...    29   4.6  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical pr...    28   8.0  
Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U10438-1|AAA19083.3|  524|Caenorhabditis elegans Hypothetical pr...    28   8.0  
DQ340624-1|ABC65812.1|  524|Caenorhabditis elegans chondroitin p...    28   8.0  

>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
            H02I12.1 protein.
          Length = 1319

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +1

Query: 511  NENAHSCDWPENVDGCQKHPLCNED--PNGN-VPLGKSCNRYWQC 636
            N+    CD+P+ V GC+ H   N +   +G+ +    +C  +++C
Sbjct: 1220 NQLTGKCDYPQKVSGCENHGQTNGECSEHGSFIADANNCEVFYRC 1264


>Z81485-6|CAB03979.1|  784|Caenorhabditis elegans Hypothetical
           protein C49F5.6 protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 132 SVLVILAAINLTSCAQIE--DPCKTKARIVADDKYCDKYWECDTDNRYN 272
           SV V+  +I+    A ++  D   TK  ++  D Y D YW+    N  N
Sbjct: 100 SVCVVANSIDENGDAGVDVTDCASTKPLVLGKDNYQDNYWDSQETNHRN 148


>AC084153-13|AAK84583.1|  123|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.1 protein.
          Length = 123

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -1

Query: 263 IVRVTFPILVAVFVIGHYSSFGLA 192
           I  V   I+V VF+IG+YS +G+A
Sbjct: 81  IFYVLLKIVVIVFIIGYYSKYGVA 104


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -3

Query: 330 QPSVTPRCLPAKTSPLGQSYCTDCPCHIPN--TCRSIC 223
           QP  T +C+  +  P  Q+  T C  H P+   C+++C
Sbjct: 528 QPQCTSQCVQQQQCPCQQTCQTGCQQHNPDARVCQNVC 565


>Z81540-5|CAB04405.2|  946|Caenorhabditis elegans Hypothetical
           protein F46B3.5 protein.
          Length = 946

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
 Frame = -2

Query: 211 ILALVLHGSSIWAHDVRFMAARITRTLVQRRPNIVY--ICSLIKFSSKQATHTRRKC 47
           IL    +  S   HD R++A  ITR  VQRR N  +  I +   FS      T R C
Sbjct: 557 ILDEARYSDSYHKHDTRYLAKMITRA-VQRRFNTTFETIVAEADFSWSTNKFTGRMC 612


>Z75532-6|CAA99813.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 272 IVPIVRVTFPILVAVFVIGHYSSFGLARVLDLGT 171
           ++P+V V  PIL    ++ H+   GL +   +GT
Sbjct: 66  LIPVVHVNLPILRFTGILSHWGFSGLFQFFVIGT 99


>Z75530-9|CAA99797.2|  330|Caenorhabditis elegans Hypothetical
           protein C47E8.2 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 272 IVPIVRVTFPILVAVFVIGHYSSFGLARVLDLGT 171
           ++P+V V  PIL    ++ H+   GL +   +GT
Sbjct: 66  LIPVVHVNLPILRFTGILSHWGFSGLFQFFVIGT 99


>U10438-1|AAA19083.3|  524|Caenorhabditis elegans Hypothetical
           protein B0280.5 protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 632 SARGGYPRLQRCPAMLVFDRRSLRCVVPPT 721
           S + G+  +  CP+ LVF+ +SL C  P T
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQT 450


>DQ340624-1|ABC65812.1|  524|Caenorhabditis elegans chondroitin
           proteoglycan-2 protein.
          Length = 524

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 632 SARGGYPRLQRCPAMLVFDRRSLRCVVPPT 721
           S + G+  +  CP+ LVF+ +SL C  P T
Sbjct: 421 SCQNGHVDIFECPSSLVFNDQSLICDYPQT 450


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,051,150
Number of Sequences: 27780
Number of extensions: 408465
Number of successful extensions: 1300
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1300
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)