Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30110
(740 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 23 4.0
AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding prote... 23 4.0
AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein. 23 4.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 4.0
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 5.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 5.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 7.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 7.0
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 7.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.2
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 320 TEGCDYPWRSNYCEY 364
TEGC+ W+ C Y
Sbjct: 122 TEGCEVAWQFGKCIY 136
>AF339140-1|AAK01304.1| 120|Apis mellifera odorant binding protein
protein.
Length = 120
Score = 22.6 bits (46), Expect = 4.0
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = +2
Query: 320 TEGCDYPWRSNYCEY 364
TEGC+ W+ C Y
Sbjct: 96 TEGCEVAWQFGKCIY 110
>AB252421-1|BAE80739.1| 122|Apis mellifera GB15078 protein.
Length = 122
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 186 DPCKTKARIVADDKYCDKYWECDTDNRY 269
D K+K I + Y+EC DN+Y
Sbjct: 79 DTLKSKMEIDPATQKDAGYYECQADNQY 106
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 712 YHASQRAPVKHQHSRATLQPRISAP 638
YH + + HQH T+ P + P
Sbjct: 326 YHPHRGSSPHHQHGNHTMGPTMGPP 350
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 329 CDYPWRSNYCEYPKAQINPPIGTEHCD 409
C PW + YC P ++ T+ D
Sbjct: 139 CGNPWNTRYCLTPTERLEALCWTQDED 165
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/27 (29%), Positives = 12/27 (44%)
Frame = +2
Query: 329 CDYPWRSNYCEYPKAQINPPIGTEHCD 409
C PW + YC P ++ T+ D
Sbjct: 192 CGNPWNTRYCLTPTERLEALCWTQDED 218
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 1 PSLTSSNAFVILN 39
PSLTS NA++I N
Sbjct: 229 PSLTSLNAYLIKN 241
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 1 PSLTSSNAFVILN 39
PSLTS NA++I N
Sbjct: 229 PSLTSLNAYLIKN 241
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 1 PSLTSSNAFVILN 39
PSLTS NA++I N
Sbjct: 280 PSLTSLNAYLIKN 292
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 7.0
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1
Query: 1 PSLTSSNAFVILN 39
PSLTS NA++I N
Sbjct: 229 PSLTSLNAYLIKN 241
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -3
Query: 327 PSVTPRCLPAKTSPLGQSYCTDCP 256
PS C P + + + CT+CP
Sbjct: 243 PSGGCHCKPGYQADVEKQECTECP 266
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 272 IVPIVRVTFPILVAVFVI 219
+VP+V I+VAV VI
Sbjct: 1588 VVPVVAAILVIIVAVIVI 1605
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,885
Number of Sequences: 438
Number of extensions: 5106
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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