Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30109
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.4  
DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory pro...    23   3.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.2  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   3.2  
AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical pro...    23   3.2  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 140 KSDKKHNYINYKFKGIHIFY 81
           K  K++ Y  Y F G+H+ Y
Sbjct: 108 KKTKRYCYYYYAFFGVHLAY 127


>DQ855489-1|ABH88176.1|  122|Tribolium castaneum chemosensory
           protein 2 protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 77  FSKIYECL*IYN*CNYASCQIF-IFPFSLITMCREC 181
           F    +CL     CN  +  +  + P +LIT CR+C
Sbjct: 40  FDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKC 75


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 572 LSNIQLFTFLHAHFQRCLYTRSTYINLIVY 483
           L+ + +FT++      C+YT +TY + ++Y
Sbjct: 321 LNILSIFTYVPMILY-CVYTTATYDSFMIY 349


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 572 LSNIQLFTFLHAHFQRCLYTRSTYINLIVY 483
           L+ + +FT++      C+YT +TY + ++Y
Sbjct: 46  LNILSIFTYVPMILY-CVYTTATYDSFMIY 74


>AJ973444-1|CAJ01491.1|  122|Tribolium castaneum hypothetical
           protein protein.
          Length = 122

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = +2

Query: 77  FSKIYECL*IYN*CNYASCQIF-IFPFSLITMCREC 181
           F    +CL     CN  +  +  + P +LIT CR+C
Sbjct: 40  FDNYLQCLLKKGKCNEEAAILRDVIPDALITGCRKC 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,510
Number of Sequences: 336
Number of extensions: 3036
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)