Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30109
         (707 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g32440.1 68415.m03963 ent-kaurenoic acid hydroxylase, putativ...    29   2.3  
At2g23180.1 68415.m02769 cytochrome P450, putative                     27   9.2  

>At2g32440.1 68415.m03963 ent-kaurenoic acid hydroxylase, putative /
           cytochrome P450, putative identical to ent-kaurenoic
           acid hydroxylase / cytochrome P450 CYP88A (GI:13021856)
           [Arabidopsis thaliana]; similar to ent-kaurenoic acid
           hydroxylase [Arabidopsis thaliana] GI:13021853
          Length = 489

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -2

Query: 199 VYIRYSAFTAHC-DQREREYENLTRSIITLIINLKAFIYFTKL 74
           +YI  S+ + H  D  EREY NL   +  + INL  F Y   L
Sbjct: 195 MYIFLSSESEHVMDSLEREYTNLNYGVRAMGINLPGFAYHRAL 237


>At2g23180.1 68415.m02769 cytochrome P450, putative
          Length = 516

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 605 TLCDVSVQLLRSKYIYFYYLKEKRNFKTF*T 697
           TL +VS+ LL   ++Y Y+L  K+  ++F T
Sbjct: 5   TLLEVSISLLFFSFLYGYFLISKKPHRSFLT 35


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,809,475
Number of Sequences: 28952
Number of extensions: 231853
Number of successful extensions: 453
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 453
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)