Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30106
(708 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 159 2e-39
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 159 2e-39
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 159 2e-39
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 153 2e-37
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 97 1e-20
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 97 1e-20
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 97 2e-20
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 95 5e-20
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 95 6e-20
03_01_0034 + 318432-318825,318902-319851 94 1e-19
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 94 1e-19
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 87 1e-17
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 61 1e-09
08_01_0312 + 2764744-2767390,2767632-2767990 31 0.68
04_01_0383 + 5085697-5085724,5085816-5085927,5087249-5087285,508... 31 1.2
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 30 1.6
10_08_0253 - 16196275-16196307,16196425-16196550,16196643-161967... 29 2.7
05_07_0299 - 29073900-29073984,29074125-29074158,29074269-290743... 29 2.7
10_03_0016 - 7099862-7099967,7100059-7100357,7101862-7102171,710... 29 3.6
12_02_0399 - 18600444-18600591,18600626-18601656 28 6.3
07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738 28 6.3
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 28 6.3
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 28 6.3
10_08_0482 + 18218163-18218362,18220388-18220446,18223027-182230... 28 8.4
07_03_1486 + 26899479-26899549,26899861-26899989,26900649-269008... 28 8.4
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 159 bits (387), Expect = 2e-39
Identities = 73/87 (83%), Positives = 77/87 (88%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 129 bits (312), Expect = 2e-30
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 159 bits (386), Expect = 2e-39
Identities = 70/87 (80%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRA+FVDLEPTV+DEVRTG+YRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
T+GKEIVDL LDR+RKLAD CTGLQGF
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGF 135
Score = 111 bits (268), Expect = 4e-25
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GNACWELYCLEHGI+PDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ AVV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-IYPSPQ-VSTAVVE-PYNSVLS 190
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 159 bits (386), Expect = 2e-39
Identities = 73/87 (83%), Positives = 76/87 (87%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTG YRQLFHPEQLI GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 126 bits (304), Expect = 2e-29
Identities = 50/63 (79%), Positives = 58/63 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQ DGQMP+D+T+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.008
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 153 bits (370), Expect = 2e-37
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = +3
Query: 216 RRFFQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYAR 395
R F F SGKHVPRA+FVDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+AR
Sbjct: 106 RDAFNTFFSETSSGKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFAR 165
Query: 396 GHYTIGKEIVDLVLDRIRKLADQCTGLQGF 485
GHYT+G+E+VDL LDR+RKLAD CTGLQGF
Sbjct: 166 GHYTVGREVVDLCLDRLRKLADNCTGLQGF 195
Score = 81.4 bits (192), Expect = 6e-16
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP D
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPRD 39
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGF 618
TGSG+ SLL+ERLSV+ RKSKLG + P PQ F
Sbjct: 205 TGSGLGSLLLERLSVDY-GRKSKLGFT-IYPSPQYF 238
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 193 TDKTIGGGDDSFNTFFSETGAASTYP 270
+D T G D+FNTFFSET + P
Sbjct: 98 SDTTPGIARDAFNTFFSETSSGKHVP 123
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 237 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 296
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 297 LDVVRKEAENCDCLQGF 313
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 64 KKTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 186
KK + KMRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 215
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 97.1 bits (231), Expect = 1e-20
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/35 (51%), Positives = 23/35 (65%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 186
MRE + + GQ G QIG+ WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGR 35
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 96.7 bits (230), Expect = 2e-20
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 95.1 bits (226), Expect = 5e-20
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHG+ G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/76 (53%), Positives = 54/76 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQG 482
LD +RK A+ C LQG
Sbjct: 117 LDVVRKEAENCDCLQG 132
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQ 186
MRE + + GQ G QIG WE+ C EHGI P G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGR 35
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VR+G Y +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDL--QLERVNVYYNEASCGR 58
Query: 262 TYP 270
P
Sbjct: 59 FVP 61
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 93.9 bits (223), Expect = 1e-19
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
Query: 262 TYP 270
P
Sbjct: 59 FVP 61
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 87.0 bits (206), Expect = 1e-17
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+HVPRAV +DLEP +D +R+G +F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRHVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQ 479
LD +RK A+ C LQ
Sbjct: 117 LDVVRKEAENCDCLQ 131
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDG 183
MRE + + GQ G QIG WE+ C EHG+ P G
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTG 34
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 60.9 bits (141), Expect = 1e-09
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 407
F Q D ++PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ 110
Query: 408 IGKEIVDLVLDRIRKLADQCTGLQGF 485
G+++VD ++D I + AD L+GF
Sbjct: 111 -GEQVVDDIMDMIDREADGSDSLEGF 135
Score = 48.0 bits (109), Expect = 7e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFF 52
>08_01_0312 + 2764744-2767390,2767632-2767990
Length = 1001
Score = 31.5 bits (68), Expect = 0.68
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +2
Query: 182 ARCPQTRPSGVETILSTLSSARPERQ 259
+RCPQ RPS + +LS L ARP+R+
Sbjct: 969 SRCPQERPS-MREVLSMLQEARPKRK 993
>04_01_0383 +
5085697-5085724,5085816-5085927,5087249-5087285,
5087512-5087581,5087704-5087808,5088022-5088172,
5088257-5088339,5089152-5089372,5089465-5089501,
5089668-5089753
Length = 309
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -2
Query: 221 SSPPPMVLSVGIWPSGWMPCSR 156
S P P+ LS I SGW+PCSR
Sbjct: 147 SMPYPITLSAVISLSGWLPCSR 168
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -2
Query: 218 SPPPMVLSVGIWPSGWMPCSR 156
+P P+ LSV + SGW+PC+R
Sbjct: 149 NPYPVNLSVSVGLSGWLPCAR 169
>10_08_0253 -
16196275-16196307,16196425-16196550,16196643-16196741,
16196822-16197001,16197090-16197371,16197471-16199141,
16199257-16199463,16199566-16199700,16199792-16200082,
16200403-16200621,16200876-16201034,16201120-16201181,
16201257-16201383,16201460-16201693,16201777-16202003,
16202163-16202257,16202341-16202468,16202574-16202594,
16202765-16202921,16203007-16203075,16203228-16203341,
16203415-16203491,16203576-16203688,16204432-16204507,
16204592-16204756,16204825-16204952,16205049-16205130,
16205426-16205548,16205633-16205860,16205933-16206034,
16206144-16206341,16206581-16206760,16206868-16207020,
16207690-16207797,16208201-16208355,16208786-16208912,
16209825-16209914,16209986-16210127,16210303-16210379,
16210467-16210582,16210638-16210773,16211130-16211198,
16211279-16211361,16211655-16211720,16211788-16211974,
16212054-16213547,16213635-16214165,16214234-16214363,
16214407-16215878,16216359-16216364,16216750-16217055,
16217364-16217468,16217577-16217772,16217862-16217929,
16218853-16220631,16221026-16221151,16221604-16221780,
16221997-16222128,16223461-16223498,16223710-16223788,
16224175-16224284,16224787-16224935,16225027-16225197,
16225281-16225552,16226355-16226442,16227942-16228369
Length = 5157
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 143 GSFTAWSTASSLMARCPQTRPS-GVETILSTLSSARPER 256
GSF+A + A+ L+ARCP R V + ST P R
Sbjct: 5 GSFSAAAAAARLLARCPALRADPRVLALASTAGGGGPSR 43
>05_07_0299 -
29073900-29073984,29074125-29074158,29074269-29074351,
29074457-29074607,29074853-29074957,29075099-29075168,
29075374-29075410,29076732-29076843,29076956-29076983
Length = 234
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 215 PPPMVLSVGIWPSGWMPCSR 156
P P+ LS I SGW+PCSR
Sbjct: 149 PYPITLSAVISLSGWLPCSR 168
>10_03_0016 -
7099862-7099967,7100059-7100357,7101862-7102171,
7104402-7105054,7105266-7105554,7106549-7106634
Length = 580
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 338 VSSRTTYYW*GRCGQQLCPWSLHHWK 415
VS+RTTY +C Q CPW +H +K
Sbjct: 239 VSNRTTYKV--KCTQAGCPWRVHGYK 262
>12_02_0399 - 18600444-18600591,18600626-18601656
Length = 392
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 338 VSSRTTYYW*GRCGQQLCPWSLHHWK 415
+S+RTTY +C Q CPW +H +K
Sbjct: 240 ISNRTTYDV--KCTQAGCPWRVHGYK 263
>07_03_0483 - 18605176-18606118,18606353-18606482,18606609-18606738
Length = 400
Score = 28.3 bits (60), Expect = 6.3
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 411 QWCSDHGHSCWPHLP 367
++ S+HGHSCW +P
Sbjct: 26 RYISEHGHSCWSSVP 40
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 125 RSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPE 253
++ M A T+ S +S P + PSGV L + SSA PE
Sbjct: 690 QTAMAASQATSISRGASQPLAVPNSMPSGVNFPLQSSSSAPPE 732
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2
Query: 209 PMVLSVGIWPSGWMPCSR 156
P+ LS I SGW+PCSR
Sbjct: 184 PVTLSAVIGLSGWLPCSR 201
>10_08_0482 +
18218163-18218362,18220388-18220446,18223027-18223083,
18223245-18223279,18223617-18223720,18223870-18223945,
18224045-18224103,18224183-18224248,18224338-18224421,
18224503-18224567,18224658-18224740,18224832-18224903,
18225166-18225306,18225395-18225456,18225539-18225605,
18225863-18226075
Length = 480
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 655 LNQPTKNPLSNSELWA 702
++Q TKN LSNSE+WA
Sbjct: 308 MSQQTKNILSNSEVWA 323
>07_03_1486 +
26899479-26899549,26899861-26899989,26900649-26900834,
26901025-26901247,26901662-26901666,26901796-26901924,
26902697-26902894,26903138-26903356,26903461-26903699,
26903797-26903888,26904009-26904224,26904327-26904554,
26904631-26904722,26904806-26904899,26905475-26905567,
26905667-26906640,26906727-26906841,26907135-26908895
Length = 1687
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = -2
Query: 596 RWRTPSLDFLAVSSTERRSINREVTPEPVLHRRSGRSESLQTGTLVSELADSV 438
R ++PSL+F ++ + I + P P R + +++L++ + + + SV
Sbjct: 267 RMKSPSLEFTSMVKSPSSDIRGDTRPSPAGLRSNSAAQNLRSSVDIQKASSSV 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,684,204
Number of Sequences: 37544
Number of extensions: 512603
Number of successful extensions: 1558
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1827423340
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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