Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30106
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 162 2e-40
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 162 2e-40
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 162 2e-40
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 162 2e-40
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 161 4e-40
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 161 4e-40
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 155 4e-38
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 98 4e-21
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 97 1e-20
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 97 1e-20
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 95 3e-20
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 95 4e-20
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 95 4e-20
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 93 2e-19
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 93 2e-19
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 91 7e-19
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 58 4e-09
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 58 6e-09
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 30 1.3
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 5.3
At1g19620.1 68414.m02445 expressed protein 28 5.3
At5g20060.2 68418.m02389 phospholipase/carboxylesterase family p... 28 7.0
At5g20060.1 68418.m02388 phospholipase/carboxylesterase family p... 28 7.0
At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar... 28 7.0
At3g20260.1 68416.m02566 expressed protein 28 7.0
At2g44560.1 68415.m05546 glycosyl hydrolase family 9 protein 28 7.0
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.2
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 129 bits (312), Expect = 2e-30
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 162 bits (393), Expect = 2e-40
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 129 bits (312), Expect = 2e-30
Identities = 52/63 (82%), Positives = 58/63 (92%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 130 bits (315), Expect = 7e-31
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 162 bits (393), Expect = 2e-40
Identities = 74/87 (85%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
TIGKEIVDL LDRIRKLAD CTGLQGF
Sbjct: 109 TIGKEIVDLCLDRIRKLADNCTGLQGF 135
Score = 130 bits (315), Expect = 7e-31
Identities = 52/63 (82%), Positives = 59/63 (93%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGA
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/50 (52%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ +VV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-VYPSPQ-VSTSVVE-PYNSVLS 190
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
T+GKEIVDL LDR+RKLAD CTGLQGF
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGF 135
Score = 112 bits (269), Expect = 3e-25
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ AVV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-IYPSPQ-VSTAVVE-PYNSVLS 190
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 4e-40
Identities = 72/87 (82%), Positives = 78/87 (89%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
T+GKEIVDL LDR+RKLAD CTGLQGF
Sbjct: 109 TVGKEIVDLCLDRVRKLADNCTGLQGF 135
Score = 112 bits (269), Expect = 3e-25
Identities = 45/63 (71%), Positives = 53/63 (84%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGA
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ AVV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDY-GKKSKLGFT-IYPSPQ-VSTAVVE-PYNSVLS 190
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 155 bits (375), Expect = 4e-38
Identities = 68/87 (78%), Positives = 77/87 (88%)
Frame = +3
Query: 225 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 404
F F SG+HVPRAVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 405 TIGKEIVDLVLDRIRKLADQCTGLQGF 485
T+G+EIVD L+R+RKLAD CTGLQGF
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGF 135
Score = 108 bits (260), Expect = 3e-24
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 262 TYP 270
P
Sbjct: 61 HVP 63
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 511 TGSGVTSLLMERLSVELTARKSKLGVRHLTPRPQGFQLAVVRGPKNSILN 660
TGSG+ SLL+ERLSV+ +KSKLG + P PQ AVV P NS+L+
Sbjct: 145 TGSGLGSLLLERLSVDF-GKKSKLGFT-IYPSPQ-VSTAVVE-PYNSVLS 190
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 98.3 bits (234), Expect = 4e-21
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 252
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 253 AASTYP 270
P
Sbjct: 56 CGRYVP 61
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 96.7 bits (230), Expect = 1e-20
Identities = 41/77 (53%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 96.7 bits (230), Expect = 1e-20
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRAV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 118 LDVVRKEAENCDCLQGF 134
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD 198
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD 39
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 95.5 bits (227), Expect = 3e-20
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 262 TYP 270
P
Sbjct: 59 FVP 61
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 95.1 bits (226), Expect = 4e-20
Identities = 40/77 (51%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/63 (36%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 95.1 bits (226), Expect = 4e-20
Identities = 39/77 (50%), Positives = 56/77 (72%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G++VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 58 GRYVPRAVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAV 117
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 118 LDVVRKEAENCDCLQGF 134
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 262 TYP 270
P
Sbjct: 60 YVP 62
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 262 TYP 270
P
Sbjct: 59 FVP 61
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 93.1 bits (221), Expect = 2e-19
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
G+ VPRAV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GRFVPRAVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ C LQGF
Sbjct: 117 LDVVRKEAENCDCLQGF 133
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 31/63 (49%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 262 TYP 270
P
Sbjct: 59 FVP 61
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 91.1 bits (216), Expect = 7e-19
Identities = 39/77 (50%), Positives = 55/77 (71%)
Frame = +3
Query: 255 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 434
GK+VPRAV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRAVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSV 116
Query: 435 LDRIRKLADQCTGLQGF 485
LD +RK A+ LQGF
Sbjct: 117 LDVVRKEAENSDCLQGF 133
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/63 (34%), Positives = 30/63 (47%)
Frame = +1
Query: 82 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAAS 261
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 262 TYP 270
P
Sbjct: 59 YVP 61
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.4 bits (135), Expect = 4e-09
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 407
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ 110
Query: 408 IGKEIVDLVLDRIRKLADQCTGLQGF 485
GK + + ++D I + AD L+GF
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGF 135
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 2/86 (2%)
Frame = +3
Query: 234 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 407
F Q D ++PRA+ +DLEP V++ ++ G YR L++ E + A NN+A G++
Sbjct: 52 FYQADDQ-HYIPRALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ 110
Query: 408 IGKEIVDLVLDRIRKLADQCTGLQGF 485
GK + + ++D I + AD L+GF
Sbjct: 111 -GKGVEEEIMDMIDREADGSDSLEGF 135
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/52 (48%), Positives = 30/52 (57%)
Frame = +1
Query: 85 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFF 240
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFF 52
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = -2
Query: 257 AAPVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 126
A PVS L +SPP +W SGW P +PI
Sbjct: 99 APPVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -2
Query: 305 NNSRFKIDEDSTGYVLAAPVSLKKVLKESSPPPM 204
N R K S+ L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At1g19620.1 68414.m02445 expressed protein
Length = 317
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 593 WRTPSLDFLAVSSTERRSINREVTPEPVLH--RRSGRSESLQTG 468
WR+ S+D L+ RR+I V+ + +H R SG + L+ G
Sbjct: 156 WRSQSMDGLSSGEEFRRTIQTFVSEQKKMHIIRASGVDDQLENG 199
>At5g20060.2 68418.m02389 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 344 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 192
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 191 GIWPSGWMPCSR 156
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At5g20060.1 68418.m02388 phospholipase/carboxylesterase family
protein similar to lysophospholipase II [Mus musculus]
GI:4589453; contains Pfam profile PF02230:
Phospholipase/Carboxylesterase family
Length = 252
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Frame = -2
Query: 344 MKQLSVCAS--ADLINNSRFKIDEDSTGYVLAAPVSLKKVL-------KESSPPPMVLSV 192
M+ L V A+ A+L++N I G+ + A SL +P P+ LS
Sbjct: 98 MEGLDVAAAHVANLLSNEPADIKLGVGGFSMGAATSLYSATCFALGKYGNGNPYPINLSA 157
Query: 191 GIWPSGWMPCSR 156
I SGW+PC++
Sbjct: 158 IIGLSGWLPCAK 169
>At4g14570.1 68417.m02243 acylaminoacyl-peptidase-related similar to
Acylamino-acid-releasing enzyme (EC 3.4.19.1)
(Acyl-peptide hydrolase) (APH) (Acylaminoacyl-peptidase)
(Swiss-Prot:P13676) [Rattus norvegicus]; annotated with
nonconsensus TT and CT acceptor splice sites.
Length = 764
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 583 GVRHLTPRPQGFQLAVVRGPKNSILNQPTKNPLSNS 690
G P P G +L V+R P+N PTK + NS
Sbjct: 98 GASAFVPSPSGLKLLVIRNPEN---ESPTKFEIWNS 130
>At3g20260.1 68416.m02566 expressed protein
Length = 437
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 578 LDFLAVSS---TERRSINREVTPEPVLHRRSGRSESLQTGTLVSELADSVQNQIYDFLSN 408
+DFL V + + ++ +E + + + RSE+ + G + S D +++ DF++N
Sbjct: 1 MDFLKVRKFRKSRKPNLEKEKEDKILAQQEQARSENTEAGVIDSGKGDEIEDDDDDFITN 60
>At2g44560.1 68415.m05546 glycosyl hydrolase family 9 protein
Length = 491
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = -3
Query: 595 DGELQV*TFLPLVQRRDAPSIGK*PQSRYSTEGVEDQNPCRPVHWSASLRILSKTKSTIS 416
+G LQ L L + + +G PQ+ GV P +P H +AS+ ++K K+ ++
Sbjct: 371 NGALQASDLLDLARSQVDYILGSNPQNMSYMVGVGTNYPKKPHHRAASIVSITKDKTPVT 430
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 450 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 361
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -1
Query: 450 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 361
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,945,929
Number of Sequences: 28952
Number of extensions: 387655
Number of successful extensions: 1196
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1196
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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