Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30104
(702 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA... 86 9e-16
UniRef50_UPI0000DB736A Cluster: PREDICTED: similar to CG11791-PA... 40 0.045
UniRef50_A3A475 Cluster: Putative uncharacterized protein; n=3; ... 36 1.3
UniRef50_A2Z4J6 Cluster: Putative uncharacterized protein; n=1; ... 34 2.9
UniRef50_Q6MMF8 Cluster: Putative O-antigen ligase WaaL; n=1; Bd... 34 3.9
UniRef50_Q4RAI7 Cluster: Chromosome undetermined SCAF23595, whol... 33 5.1
UniRef50_UPI0000499355 Cluster: hypothetical protein 219.t00012;... 33 9.0
UniRef50_Q294Y4 Cluster: GA11710-PA; n=1; Drosophila pseudoobscu... 33 9.0
>UniRef50_UPI0000D55750 Cluster: PREDICTED: similar to CG11791-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG11791-PA, isoform A - Tribolium castaneum
Length = 137
Score = 85.8 bits (203), Expect = 9e-16
Identities = 59/136 (43%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Frame = +2
Query: 335 MVGNNGTMMAIRIVHSKLRKREEHSASVHPAEV-------------XXXXXXXXXXXXXF 475
MVG+NGTM+AIR+V SKLRKREEHS SVHPA+V +
Sbjct: 1 MVGSNGTMIAIRLVRSKLRKREEHSNSVHPADVVLHQTTPAAATQTPTAPQALQPDPLAY 60
Query: 476 RQQPLWQFPPPCLRLSSILTIRTT*CSRTANERASF-RSLRKNIGGRWKTT*VKKEA*TG 652
R Q LWQ+PPP + + T ER F R RKN+GGRW+ VK++ T
Sbjct: 61 RGQFLWQYPPPPPQPYMYNNDQDTLVQNLPTERPGFVRGFRKNLGGRWRRL-VKRKPPTE 119
Query: 653 SLHDPALSFKPQLKQI 700
PA KPQLKQI
Sbjct: 120 VYTIPA-ELKPQLKQI 134
>UniRef50_UPI0000DB736A Cluster: PREDICTED: similar to CG11791-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG11791-PA, isoform A - Apis mellifera
Length = 160
Score = 40.3 bits (90), Expect = 0.045
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = +2
Query: 356 MMAIRIVHSKLRKREEHSASVHP 424
M+AIR+V SKLRKRE+HS +VHP
Sbjct: 1 MIAIRLVRSKLRKREDHSNAVHP 23
>UniRef50_A3A475 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 384
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -1
Query: 525 DERRRHGG--GNCHKGCWRNARGSGCGAGAAWSTSAGCTEAECSSL 394
DERRR GG GN C +A G+ A +A S+S+ T + CSS+
Sbjct: 66 DERRRRGGFGGNGATTCDDSACGARAAASSASSSSSSATTSHCSSV 111
>UniRef50_A2Z4J6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 264
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -1
Query: 516 RRHG---GGNCHKGCWRNARGSGCGAGAAWSTSAGCTEAEC 403
RRHG G C G WR AR G G G WS AG T C
Sbjct: 152 RRHGVEAGAAC--GAWRPARWRGIGCG-TWSVEAGSTAWRC 189
>UniRef50_Q6MMF8 Cluster: Putative O-antigen ligase WaaL; n=1;
Bdellovibrio bacteriovorus|Rep: Putative O-antigen
ligase WaaL - Bdellovibrio bacteriovorus
Length = 419
Score = 33.9 bits (74), Expect = 3.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -3
Query: 646 SGFFFHLSRFPTTTDILAKTAETGTLVCRAAALSC 542
+GF F +F + TDIL+K G+L+C A C
Sbjct: 341 AGFVFFHKKFKSATDILSKQLSLGSLLCIVALFGC 375
>UniRef50_Q4RAI7 Cluster: Chromosome undetermined SCAF23595, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF23595,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 455
Score = 33.5 bits (73), Expect = 5.1
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = -1
Query: 477 RNARGSGCGAGAAWSTSAGCTEAECSSLLRSLLWTMRIAIIVPLFPTI--VSKGP 319
R G+G G AA + GC + + S R W +A+ VP+ PT+ + +GP
Sbjct: 392 REGGGAGGGGAAAHGEAPGCDQVQRSYWSRH-FWVDLLAVAVPMVPTVAWLCRGP 445
>UniRef50_UPI0000499355 Cluster: hypothetical protein 219.t00012;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 219.t00012 - Entamoeba histolytica HM-1:IMSS
Length = 487
Score = 32.7 bits (71), Expect = 9.0
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = -3
Query: 643 GFFFHLSRFPTTTDILAKTAETGTLVCRAAALSCP 539
G HLS +PTT+++ + +++CR+ + CP
Sbjct: 203 GVIQHLSEYPTTSELFINASWIFSVICRSLKVECP 237
>UniRef50_Q294Y4 Cluster: GA11710-PA; n=1; Drosophila
pseudoobscura|Rep: GA11710-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 616
Score = 32.7 bits (71), Expect = 9.0
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -1
Query: 504 GGNCHKGCWRNARGSGCGAGAAWSTSAGCTEAE 406
GG G N GSGCG+G+AWS + + E
Sbjct: 87 GGGHRNGGSGNGSGSGCGSGSAWSGTESAFQYE 119
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,119,817
Number of Sequences: 1657284
Number of extensions: 11229911
Number of successful extensions: 32106
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30327
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32022
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 55785129165
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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