Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30102
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 170 3e-41
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 165 1e-39
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 162 7e-39
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 128 2e-28
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 125 1e-27
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 118 1e-25
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 111 1e-23
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 109 5e-23
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 102 1e-20
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 100 3e-20
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 100 4e-20
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 99 9e-20
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 89 1e-16
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 73 5e-12
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 69 2e-10
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 58 7e-08
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 59 1e-07
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 43 0.009
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 42 0.011
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 40 0.046
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 38 0.25
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 38 0.32
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 37 0.43
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 37 0.43
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 37 0.43
UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.57
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 36 0.75
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 0.99
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 36 1.3
UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing... 35 2.3
UniRef50_A1GCX7 Cluster: Helicase-like; n=2; Actinomycetales|Rep... 35 2.3
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 34 3.0
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 34 3.0
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 34 3.0
UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory tra... 34 4.0
UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 34 4.0
UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n... 33 5.3
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 7.0
UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa... 33 7.0
UniRef50_UPI0000D9A6F0 Cluster: PREDICTED: hypothetical protein;... 33 9.2
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 170 bits (413), Expect = 3e-41
Identities = 106/237 (44%), Positives = 139/237 (58%), Gaps = 11/237 (4%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MKLN+SYP TG +++ + K + G C W+ R
Sbjct: 1 MKLNISYPVTGCQKLIEIEDERKVRSFYDKR---------MAMEVSGECLGDEWKGYVFR 51
Query: 197 IP---DETGRPDKQPCSSSD------VKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 349
I D+ G P KQ ++ KGHSCYRPRR GERKRKSVRGCIVD+ LSVL+L
Sbjct: 52 ITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDSQLSVLSL 111
Query: 350 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPARKEKKML 529
VIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP ++ KK
Sbjct: 112 VIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGKKAK 171
Query: 530 N--PDIRHLRSRG*SPL*FCSVDVIVSL*RRSVFAKRKFSEAEYAKLLAQRKRKESQ 694
+ P I+ L +P+ ++L +R K K A+YAKLLA+R ++ +
Sbjct: 172 SKAPKIQRLV----TPVVLQRKRKRLAL-KRQRAQKCKQEAADYAKLLAKRAKEAKE 223
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 165 bits (400), Expect = 1e-39
Identities = 101/227 (44%), Positives = 129/227 (56%), Gaps = 1/227 (0%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MKLN+S+PATG +++ + K +G +
Sbjct: 1 MKLNISFPATGCQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQG 60
Query: 197 IPDETGRPDKQPCSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 376
P + G KGHSCYRPRR GERKRKSVRGCIVDANLSVL LVIV+KG ++
Sbjct: 61 FPMKQGVLTHGRVRLLLSKGHSCYRPRRTGERKRKSVRGCIVDANLSVLNLVIVKKGEKD 120
Query: 377 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAR-KEKKMLNPDIRHLR 553
IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L K+ + P I+ L
Sbjct: 121 IPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPLNKEGKKPRTKAPKIQRLV 180
Query: 554 SRG*SPL*FCSVDVIVSL*RRSVFAKRKFSEAEYAKLLAQRKRKESQ 694
+ P ++L ++ K K AEYAKLLA+R ++ +
Sbjct: 181 T----PRVLQHKRRRIAL-KKQRTKKNKEEAAEYAKLLAKRMKEAKE 222
Score = 118 bits (284), Expect = 1e-25
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +3
Query: 51 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 230
CQKL EV DE KLR FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHG 71
Query: 231 RVRLLMSK 254
RVRLL+SK
Sbjct: 72 RVRLLLSK 79
Score = 39.9 bits (89), Expect = 0.061
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +1
Query: 517 KENAKPRHKAPKIQRLVTPVVLQ 585
KE KPR KAPKIQRLVTP VLQ
Sbjct: 164 KEGKKPRTKAPKIQRLVTPRVLQ 186
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 162 bits (394), Expect = 7e-39
Identities = 101/226 (44%), Positives = 128/226 (56%), Gaps = 2/226 (0%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MKLNVS+PATG + + + K +G +
Sbjct: 1 MKLNVSFPATGAQKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQG 60
Query: 197 IPDETGRPDKQPCSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 376
P + G KGHSCYRPRR GERKRKSVRGCIVD NLS LAL++V+KG ++
Sbjct: 61 FPMKQGVLTNTRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDQNLSALALIVVKKGEKD 120
Query: 377 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPARKEKKMLN--PDIRHL 550
IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP + KK P I+ L
Sbjct: 121 IPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGKKPRTKAPKIQRL 180
Query: 551 RSRG*SPL*FCSVDVIVSL*RRSVFAKRKFSEAEYAKLLAQRKRKE 688
+P+ +++ +R V RK +EAEY K+L R+R+E
Sbjct: 181 I----TPVVLQRKRHRLAIKKRRV-ESRKEAEAEYMKILHLRRRQE 221
Score = 122 bits (295), Expect = 7e-27
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = +3
Query: 54 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 233
QK FEV+D+HKLR FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+R
Sbjct: 13 QKTFEVMDDHKLRHFYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTR 72
Query: 234 VRLLMSK 254
VRLL+ K
Sbjct: 73 VRLLLKK 79
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 128 bits (308), Expect = 2e-28
Identities = 58/100 (58%), Positives = 74/100 (74%)
Frame = +2
Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430
KG CYRPR+ GE++RKSVRGCIV +LS L L +V+KG EIPGLTD V ++LGPKRA
Sbjct: 120 KGMKCYRPRKKGEKRRKSVRGCIVGQDLSALNLTLVKKGTNEIPGLTDKAVGKKLGPKRA 179
Query: 431 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKMLNPDIRHL 550
+KIRKLFNL K DDVR+YV+ R + + + + P I+ L
Sbjct: 180 TKIRKLFNLDKTDDVRKYVIGRAISKNGKNRFIKPKIQRL 219
Score = 89.8 bits (213), Expect = 6e-17
Identities = 42/67 (62%), Positives = 49/67 (73%)
Frame = +3
Query: 54 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 233
QK E+ DE KL F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM QGVLTN+R
Sbjct: 54 QKSIEIDDEKKLLPFMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNR 113
Query: 234 VRLLMSK 254
VRLL K
Sbjct: 114 VRLLFKK 120
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 125 bits (301), Expect = 1e-27
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +3
Query: 51 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 230
CQKLFEVVDEHKLR+FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+
Sbjct: 12 CQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHG 71
Query: 231 RVRLL 245
R+RLL
Sbjct: 72 RLRLL 76
Score = 64.5 bits (150), Expect(2) = 7e-10
Identities = 60/180 (33%), Positives = 81/180 (45%), Gaps = 8/180 (4%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MKLNVSYPATG ++ + K +E W+ Q R
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKR---------MGQVVEADILGDEWKGYQLR 51
Query: 197 IP---DETGRPDKQPCSSSD-----VKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALV 352
I D+ G P KQ + K HSC+ PR + RK K+VR V+AN+S L LV
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRLRLLKKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLV 111
Query: 353 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPARKEKKMLN 532
+++K P RLGP R+S I K++ L +EDD V+ L R +KK N
Sbjct: 112 VLKKNPS----------PCRLGPVRSSNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 158
Score = 21.8 bits (44), Expect(2) = 7e-10
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 647 AEYAKLLAQRKRKESQ 694
AEY KLL +RK KES+
Sbjct: 165 AEYVKLLVKRK-KESK 179
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 118 bits (285), Expect = 1e-25
Identities = 71/182 (39%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MK N+SYP TG + V + S K +G +
Sbjct: 1 MKFNISYPLTGAQKTVEIDDDKKCSIFFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQG 60
Query: 197 IPDETGRPDKQPCSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 376
P G K KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA E
Sbjct: 61 FPMRQGVLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANE 120
Query: 377 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPARKEKKMLN-PDIR 544
I GLTD NVPRRLGPKR +K+R+LF K D V++ +++R + KK P I+
Sbjct: 121 IAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKKRQKAPKIQ 180
Query: 545 HL 550
L
Sbjct: 181 RL 182
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 111 bits (268), Expect = 1e-23
Identities = 67/182 (36%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Frame = +2
Query: 17 MKLNVSYPATGMPEVVRSGGRAQASYLLRKAHXXXXXXXXXXXXMEGLCTSCRWRQRQAR 196
MK N+SYP TG + + + + + K +G +
Sbjct: 1 MKFNISYPLTGAQKCIEIDDDKKCNIFMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDG 60
Query: 197 IPDETGRPDKQPCSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQE 376
P + G + +GHSC+ RR G RKRKSVRGCIV ++ VLAL IV+KG E
Sbjct: 61 FPMKQGVMVRGRVRLLLSEGHSCFTSRRSGFRKRKSVRGCIVGPDMRVLALQIVKKGVAE 120
Query: 377 IPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPARKEKKMLN-PDIR 544
I GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R K K P I+
Sbjct: 121 IDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKDRTKCPKIQ 180
Query: 545 HL 550
L
Sbjct: 181 RL 182
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 109 bits (263), Expect = 5e-23
Identities = 50/75 (66%), Positives = 59/75 (78%)
Frame = +2
Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430
KGH YRPR+DGE KRKS+RGCIV ++ VLAL +V+KGA EI GLTD NVPRRLGPKR
Sbjct: 84 KGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLALQVVKKGANEIAGLTDQNVPRRLGPKRL 143
Query: 431 SKIRKLFNLSKEDDV 475
+K+R+LF K D V
Sbjct: 144 TKLRRLFGFKKADRV 158
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 102 bits (244), Expect = 1e-20
Identities = 44/66 (66%), Positives = 53/66 (80%)
Frame = +3
Query: 51 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNS 230
CQKL E DE K R FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+
Sbjct: 12 CQKLIEADDERKPRTFYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTHD 71
Query: 231 RVRLLM 248
R+ LL+
Sbjct: 72 RIHLLL 77
Score = 63.7 bits (148), Expect = 4e-09
Identities = 30/52 (57%), Positives = 38/52 (73%)
Frame = +2
Query: 371 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPARKEKKM 526
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + + R + R K+M
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRM 131
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 100 bits (240), Expect = 3e-20
Identities = 43/80 (53%), Positives = 64/80 (80%)
Frame = +2
Query: 257 HSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASK 436
+ CY+P R+GER+RK+VRG IV ++SVL ++V+KG EI G+T+ +P R GP+RAS
Sbjct: 80 NGCYKPLRNGERRRKTVRGAIVAGDISVLNTIVVKKGEGEIEGVTNDALPMRAGPQRASH 139
Query: 437 IRKLFNLSKEDDVRRYVVKR 496
RKLFNLS++DDV+++V++R
Sbjct: 140 FRKLFNLSQKDDVKKFVIRR 159
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/64 (56%), Positives = 47/64 (73%)
Frame = +3
Query: 57 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 236
K F+ +E R F +KR+G EV+A LGDE+KGY+L++ GG DK GFPM GV TN+RV
Sbjct: 13 KKFDFEEEKNYRPFLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRV 72
Query: 237 RLLM 248
RLL+
Sbjct: 73 RLLL 76
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 100 bits (239), Expect = 4e-20
Identities = 47/90 (52%), Positives = 70/90 (77%), Gaps = 1/90 (1%)
Frame = +2
Query: 284 GERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSK 463
GER+RK+VRGC++ ++++++ + I + G Q I G+TD PRRLGPKRASKIRKLFNLS+
Sbjct: 93 GERRRKNVRGCVLASDIALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSR 152
Query: 464 EDDVRRYVV-KRVLPARKEKKMLNPDIRHL 550
+DVR+YVV +RV+ + K+ ++ P I+ L
Sbjct: 153 TEDVRKYVVRRRVVKSGKKDRLKAPKIQRL 182
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 KLFEVVDEHKLRI-FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 233
K FE+ DE R+ + R+G EV+ G E+KGY+ R+ GG+DK GFPM GVL +SR
Sbjct: 14 KQFEISDEVLRRVQLQDYRLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSR 73
Query: 234 VRLLMSK 254
V LL+ +
Sbjct: 74 VSLLVKR 80
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 99.1 bits (236), Expect = 9e-20
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +2
Query: 254 GHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRAS 433
G SCYRPR+DGERKRK+VRGCI+ +S L V+++KG +EI GLT VPRR GPKRAS
Sbjct: 80 GASCYRPRKDGERKRKTVRGCIISDEISALHCVVLQKGEKEIDGLTTTAVPRRFGPKRAS 139
Query: 434 KIRKLFNLS-KEDDVRRYVVKRVLPARKEKKMLNPDIRHL 550
+R +F ++ + D + V+KR + K K +P ++ L
Sbjct: 140 TLRAMFGITDSKFDASKLVLKREV---KPGKFTSPKVQRL 176
Score = 79.4 bits (187), Expect = 8e-14
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 42 QRACQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVL 221
+ Q + ++ D L YEKR+G ++E ++LG ++KGY+ R+ GG DKQGFPMKQGV+
Sbjct: 9 ENGTQVVVDIDDPAALNALYEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMKQGVI 68
Query: 222 TNSRVRLLM 248
T R+RLL+
Sbjct: 69 TPRRIRLLL 77
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 89.0 bits (211), Expect = 1e-16
Identities = 42/69 (60%), Positives = 53/69 (76%)
Frame = +2
Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430
+G CY RR+GERKRKS+RGCIV +L L++V+V G + +PGLTD VP+RL PKRA
Sbjct: 85 QGAKCYLHRRNGERKRKSIRGCIVGPDLHALSVVLVDAGDKTLPGLTDVVVPKRLVPKRA 144
Query: 431 SKIRKLFNL 457
SKIR+LF L
Sbjct: 145 SKIRRLFGL 153
Score = 60.1 bits (139), Expect = 5e-08
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = +3
Query: 57 KLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRV 236
K + D K + + RM +E + LG+E+ G R+ GGND QGFPM QGVL + R
Sbjct: 20 KSLMIEDFRKSQTIHGLRMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRA 79
Query: 237 RLLM 248
RLL+
Sbjct: 80 RLLL 83
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 73.3 bits (172), Expect = 5e-12
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = +3
Query: 54 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 233
Q E+ DE KLRI Y K++ ++++ +G EW + + GG DKQGFPMK+G+L+ SR
Sbjct: 13 QHTIEIDDEDKLRILYGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSR 72
Query: 234 VRLLMSKAT 260
V++L+ K +
Sbjct: 73 VKILLKKGS 81
Score = 58.0 bits (134), Expect = 2e-07
Identities = 29/72 (40%), Positives = 47/72 (65%)
Frame = +2
Query: 278 RDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL 457
+ GER RKSVRGCIV +SVL + ++ ++ +T+ N + L KR+S +RK+ L
Sbjct: 90 KKGERCRKSVRGCIVSPEISVLNIKLLTNKNDDLL-ITNKNSEKTLTHKRSSNLRKVLCL 148
Query: 458 SKEDDVRRYVVK 493
+K DD+R++ +K
Sbjct: 149 TKTDDIRKHYIK 160
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/99 (38%), Positives = 56/99 (56%)
Frame = +2
Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430
KG + YR RR G R+RKSVRG IV + VL L+I+R G +EI GLT+ P++
Sbjct: 64 KGDAGYRCRRKGVRRRKSVRGSIVSEEICVLNLIILRPGEKEIDGLTNAVNDVSHLPRKE 123
Query: 431 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKMLNPDIRH 547
K+RK+F + E+ ++ +L + + P IRH
Sbjct: 124 KKLRKMFGVPDEEKNVVGYIRNILKSECDDPKKIPKIRH 162
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/65 (41%), Positives = 46/65 (70%)
Frame = +3
Query: 60 LFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVR 239
+FE+ +++R+ Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR
Sbjct: 1 MFEIERRNEVRL-YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVR 59
Query: 240 LLMSK 254
L+SK
Sbjct: 60 PLLSK 64
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 57.6 bits (133), Expect(2) = 7e-08
Identities = 38/94 (40%), Positives = 52/94 (55%)
Frame = +2
Query: 251 KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRA 430
K HSC+ PR + RK K+VR V+AN+S L LV+++K P RLGP R+
Sbjct: 25 KIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNPS----------PCRLGPVRS 74
Query: 431 SKIRKLFNLSKEDDVRRYVVKRVLPARKEKKMLN 532
S I K++ L +EDD V+ L R +KK N
Sbjct: 75 SNISKIYYLCEEDD---EVIPVKLQRRHQKKRQN 105
Score = 21.8 bits (44), Expect(2) = 7e-08
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 647 AEYAKLLAQRKRKESQ 694
AEY KLL +RK KES+
Sbjct: 112 AEYVKLLVKRK-KESK 126
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens (Human)
Length = 91
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/35 (74%), Positives = 27/35 (77%)
Frame = +3
Query: 51 CQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWK 155
CQKL EV DE KLR FYEKRM EV AD LG+EWK
Sbjct: 12 CQKLIEVDDERKLRTFYEKRMATEVAADALGEEWK 46
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 42.7 bits (96), Expect = 0.009
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +3
Query: 108 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKAT 260
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ T
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVNGGT 78
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +3
Query: 57 KLFEV-VDEHKLRIFYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNS 230
K F++ ++ R F KR+G V A LG E KG L + GG+D+ GFPM+ +
Sbjct: 133 KAFQITIEGENARKFIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPV 192
Query: 231 RVRLLMS 251
+ R L+S
Sbjct: 193 KKRALLS 199
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 40.3 bits (90), Expect = 0.046
Identities = 19/77 (24%), Positives = 45/77 (58%)
Frame = +3
Query: 75 DEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 254
D+ + +++G +E LG+++ + GG+DKQGF +K+ + T R+++ + K
Sbjct: 19 DDEFIEHIIGRKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKK 78
Query: 255 ATHVTDRAAMERENVNQ 305
+ + +R+ +R+N+ +
Sbjct: 79 GS-LGNRSHFKRKNLTK 94
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 37.9 bits (84), Expect = 0.25
Identities = 24/69 (34%), Positives = 40/69 (57%)
Frame = +3
Query: 45 RACQKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLT 224
RA QK+ E + ++L K++G +V + + D Y L++ GG D+ GFPM+ +
Sbjct: 14 RAYQKVVEGANANRL---IGKQIG-DVISGTIVDLPPDYELKITGGTDRDGFPMRPDLPG 69
Query: 225 NSRVRLLMS 251
+R RLL+S
Sbjct: 70 TARRRLLLS 78
Score = 33.1 bits (72), Expect = 7.0
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 266 YRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 367
+RP+ G RKRK VRG ++ ++ + V+V+ G
Sbjct: 83 FRPKEKGLRKRKGVRGRVISKDILQINTVVVKHG 116
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 37.5 bits (83), Expect = 0.32
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 111 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTD 272
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+ + D
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVGLRD 89
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 37.1 bits (82), Expect = 0.43
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -1
Query: 248 HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 144
H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 177 HEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 37.1 bits (82), Expect = 0.43
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Frame = +3
Query: 105 KRMGAEVEADQLG---DEWKGYV------LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKA 257
+R+G E+ A +LG E G L++ GG DK GFPM+ V RV++L+S+
Sbjct: 32 RRIGEEIPASELGLNLSEIFGEEIPADAKLKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
Query: 258 THVTDRAAMER 290
R ER
Sbjct: 92 PGFRPRERGER 102
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 37.1 bits (82), Expect = 0.43
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = +2
Query: 203 DETGRPDKQPCSSSDV-----KGHSCYRPRRDGERKRKSVRGCIVDANLSVLALVIVRKG 367
D+ GRP ++ SD+ +G + + P DGERKR +VRG V ++ L + I G
Sbjct: 57 DDAGRPMREDVDGSDLMEVLLEGGAGFNPDEDGERKRVTVRGKEVSEAVAQLNVAIDEHG 116
Query: 368 AQEIPGL 388
+ + L
Sbjct: 117 EEPVAEL 123
Score = 33.1 bits (72), Expect = 7.0
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = +3
Query: 72 VDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMS 251
VD F + +GA V+ +G + GY + + GG+D G PM++ V + + +L+
Sbjct: 21 VDGQDANRFIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLLE 78
Query: 252 KATHVTDRAAMERENV 299
ER+ V
Sbjct: 79 GGAGFNPDEDGERKRV 94
>UniRef50_A0UBB5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia multivorans ATCC 17616|Rep: Putative
uncharacterized protein - Burkholderia multivorans ATCC
17616
Length = 165
Score = 36.7 bits (81), Expect = 0.57
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Frame = +2
Query: 194 RIPDETGRPDKQP--------CSSSDVKGHSCYRPRRDGERKRKSVRGCIVDANLSVLAL 349
R+P+E G+ + +P C+ GH+ R R R R+ GC +DA L
Sbjct: 49 RVPEEIGQHEFRPDVVGQHVQCAGHGAVGHAEQRRGRHRRRYRREHAGCGIDAERRERRL 108
Query: 350 VIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKL 448
+ A P RR+GP RA +++ L
Sbjct: 109 TDASRRAVRAPLRRPVGARRRVGPCRARRMKDL 141
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 36.3 bits (80), Expect = 0.75
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 9/71 (12%)
Frame = +3
Query: 105 KRMGAEVEADQL--------GDEWKGYV-LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKA 257
KR+G ++ A +L G E+ V L + GG DK GFPM+ + RVR+L+SK
Sbjct: 32 KRIGDQIPAKELNINLNELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
Query: 258 THVTDRAAMER 290
+ ER
Sbjct: 92 PGFRPKEKGER 102
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 0.99
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +3
Query: 99 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 218
Y K++G ++ ++G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.5 bits (78), Expect = 1.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 155 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHS 262
G C RWR ++ + DE G + PC+ DV+G S
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRGCS 52
>UniRef50_UPI0000DD81A8 Cluster: PREDICTED: SET domain containing
1B; n=1; Homo sapiens|Rep: PREDICTED: SET domain
containing 1B - Homo sapiens
Length = 2145
Score = 34.7 bits (76), Expect = 2.3
Identities = 29/88 (32%), Positives = 39/88 (44%)
Frame = -3
Query: 384 PGISWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGL*HEWPLTSEDEHGCLSGRPVS 205
PG + A RT T A T + TI PR+ LR+ P P TS E G +
Sbjct: 441 PGATRASSRTPTTAATNIIMYTILPRS-LRWPGPQPLS---GVPRTSRSEQSAALG---A 493
Query: 204 SGILACRCRQRHEVHSPSIHRLTDQPLL 121
+ + R R + H P++H QPLL
Sbjct: 494 AAVPRSRLNHRIQPHLPTLHHPPKQPLL 521
>UniRef50_A1GCX7 Cluster: Helicase-like; n=2; Actinomycetales|Rep:
Helicase-like - Salinispora arenicola CNS205
Length = 956
Score = 34.7 bits (76), Expect = 2.3
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = -3
Query: 711 SWRTQPWDSFLFLCASNLAYSASENLRLAKTLLLQSETM 595
S + Q WD+ + + NLA +A++N RLA+TL +ETM
Sbjct: 231 SLKKQRWDAVVIDESHNLANAATQNNRLARTLARNTETM 269
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 34.3 bits (75), Expect = 3.0
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 105 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 254
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAE 79
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 34.3 bits (75), Expect = 3.0
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 111 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 290
+G E +A +G K L++ GG+DK G PM+ + +R +L+SK + D +R
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVGLQDAEKGQR 89
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 34.3 bits (75), Expect = 3.0
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +3
Query: 105 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSK 254
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKE 75
>UniRef50_A0L8P8 Cluster: Methyl-accepting chemotaxis sensory
transducer; n=1; Magnetococcus sp. MC-1|Rep:
Methyl-accepting chemotaxis sensory transducer -
Magnetococcus sp. (strain MC-1)
Length = 515
Score = 33.9 bits (74), Expect = 4.0
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +3
Query: 111 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKATHVTDRAAMER 290
+ A +EA + GD KG+ + A D +Q + ++V+ ++++ H TDRA M
Sbjct: 364 LNASIEAAKAGDSGKGFAVVAAEVKDLA----EQSEESTAQVQKILTEIQHATDRAVMAT 419
Query: 291 ENVNQFVDVLLTPISRS 341
E + VD + +SR+
Sbjct: 420 EEGVKDVDQGVILMSRT 436
>UniRef50_Q2H5M1 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 494
Score = 33.9 bits (74), Expect = 4.0
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2
Query: 149 MEGLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKGHSC 265
+ G C +CR R+ + +P + GRP+ C SS GH+C
Sbjct: 6 LSGYCLTCRKRRVKCDVPADKGRPNCGRCISS---GHTC 41
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 33.9 bits (74), Expect = 4.0
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +3
Query: 72 VDEHKLRIFYEKRMGAEVEADQL-GDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 248
VD++K ++G EA+QL G K L++ GG+D GFPM+ V+ ++ ++L+
Sbjct: 121 VDQNKATNLVGLKIGDVFEANQLIGLPVK---LKITGGSDNSGFPMRFDVIGAAKRKILL 177
Query: 249 S 251
S
Sbjct: 178 S 178
>UniRef50_UPI0000DC1AEC Cluster: UPI0000DC1AEC related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DC1AEC UniRef100 entry -
Rattus norvegicus
Length = 227
Score = 33.5 bits (73), Expect = 5.3
Identities = 32/95 (33%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
Frame = +3
Query: 54 QKLFEVVDEHKLRIFYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSR 233
Q L EV + KLR FYEK M E+ + +E N + F MKQ VL + R
Sbjct: 13 QILTEVDGKCKLRAFYEKCMTTEITVNFSCEE-----------NADKIFSMKQEVLIHFR 61
Query: 234 VRLLMSKATHVTDRAAMERE-NVNQFVDVLLTPIS 335
V LL++ + RE N D + PIS
Sbjct: 62 VHLLLNNLHSYIYKPLRTREMNYTSLQDAVKLPIS 96
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 33.5 bits (73), Expect = 5.3
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +2
Query: 347 LVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 487
L+ V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 494 LLRVNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -3
Query: 222 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 124
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_Q0IR54 Cluster: Os11g0676800 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os11g0676800 protein -
Oryza sativa subsp. japonica (Rice)
Length = 822
Score = 33.1 bits (72), Expect = 7.0
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Frame = +2
Query: 296 RKSVRGCIVDANLSVLALVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKED-- 469
+KS + C N ++ LV++RKG + LT G + K S RK+ N+SK+
Sbjct: 227 KKSSQSCSGRLNSYIVVLVMLRKGGWKSQQLTIGLARHEVAVKIRSLNRKIENISKDRVF 286
Query: 470 -DVRRYV---VKRVLPARKEKKMLNPDI 541
++ V VL RK +L P+I
Sbjct: 287 LTLKSTVPTGSSSVLRVRKSSHLLEPNI 314
>UniRef50_UPI0000D9A6F0 Cluster: PREDICTED: hypothetical protein;
n=1; Macaca mulatta|Rep: PREDICTED: hypothetical protein
- Macaca mulatta
Length = 549
Score = 32.7 bits (71), Expect = 9.2
Identities = 41/146 (28%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Frame = -3
Query: 426 RLGPRRRGTFPSVNPGI-SWAPLRTITRAKTERLASTIHPRTDLRFLSPSRRGL*HEWPL 250
R GP + + S P SW+ R+ +++++ ++ PR+ R SP + PL
Sbjct: 376 RGGPEGKSSSRSPGPHPRSWSSSRSPSKSRSR--SAEKRPRSPSRSPSPKK-------PL 426
Query: 249 TSEDEHGCLSGRPVSSGILACRCRQRHEVHSPSIHRLTDQPLL---RRPCAFRKRYEACA 79
S D+ G GR S A R R+R +SP R D P RR + RKR
Sbjct: 427 -SRDKDG--EGRARHSEAEAARARRRSRSYSPIRKRRRDSPSFMEPRRITSARKRPIPYY 483
Query: 78 RPPLRTTSGMPVAGYETFNFMTAVNP 1
RP ++S + Y T + + +P
Sbjct: 484 RPSPSSSSSCLSSDYSTRSHSRSPSP 509
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,266,289
Number of Sequences: 1657284
Number of extensions: 14400542
Number of successful extensions: 43313
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 41615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43280
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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