Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30100
         (637 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         177   2e-46
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         177   2e-46
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         177   2e-46
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          161   2e-41
DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        27   0.66 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.1  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  177 bits (432), Expect = 2e-46
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 2e-16
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  177 bits (432), Expect = 2e-46
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 2e-16
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  177 bits (432), Expect = 2e-46
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338



 Score = 78.2 bits (184), Expect = 2e-16
 Identities = 35/35 (100%), Positives = 35/35 (100%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  161 bits (391), Expect = 2e-41
 Identities = 74/82 (90%), Positives = 79/82 (96%)
 Frame = +2

Query: 2   RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
           R PEALFQPSFLGME+ GIHET YNSIM+CDVDIRKDLYAN+VLSGGTTMYPGIADRMQK
Sbjct: 257 RAPEALFQPSFLGMESTGIHETVYNSIMRCDVDIRKDLYANSVLSGGTTMYPGIADRMQK 316

Query: 182 EITALAPSTMKIKIIAPPERKY 247
           EIT+LAPST+KIKIIAPPERKY
Sbjct: 317 EITSLAPSTIKIKIIAPPERKY 338



 Score = 70.5 bits (165), Expect = 4e-14
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = +1

Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
           IGGSILASLSTFQ MWISK EYDE GP IVHRKCF
Sbjct: 342 IGGSILASLSTFQTMWISKHEYDEGGPGIVHRKCF 376


>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.6 bits (56), Expect = 0.66
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +2

Query: 317 STTSLAPPLYTGSASKRTARRCLQQPAAGCSIQA 418
           S  +L   LY GSAS+    R LQQ  +G + QA
Sbjct: 70  SVKALLALLYEGSASRSETERELQQALSGGNSQA 103


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 264  IDPRLPLYLPTDVDLETGVRRVW 332
            +DP + LYL T+  L+ G +  W
Sbjct: 1188 LDPDIRLYLKTNTYLQWGDKLFW 1210


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,939
Number of Sequences: 2352
Number of extensions: 13606
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)