Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30100
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 171 5e-43
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 171 5e-43
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 171 5e-43
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 171 5e-43
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 171 5e-43
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 171 5e-43
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 170 8e-43
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 170 8e-43
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 170 8e-43
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 164 5e-41
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 158 3e-39
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 86 2e-17
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 73 1e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 58 4e-09
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 55 4e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol ... 29 2.8
U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol ... 29 2.8
U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol ... 29 2.8
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 6.4
U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical pr... 28 6.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 6.4
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 213 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 272
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 273 EITALAPSTMKIKIIAPPERKY 294
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 298 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 243 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 302
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 303 EITALAPSTMKIKIIAPPERKY 324
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 328 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 171 bits (415), Expect = 5e-43
Identities = 78/82 (95%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 170 bits (413), Expect = 8e-43
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 170 bits (413), Expect = 8e-43
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 170 bits (413), Expect = 8e-43
Identities = 77/82 (93%), Positives = 81/82 (98%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAPSTMKIKIIAPPERKY
Sbjct: 317 EITALAPSTMKIKIIAPPERKY 338
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 342 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 164 bits (398), Expect = 5e-41
Identities = 76/82 (92%), Positives = 80/82 (97%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLSGGTTMYPGIADRMQK
Sbjct: 257 RCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQK 316
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EITALAP TMKIKIIAPPERKY
Sbjct: 317 EITALAP-TMKIKIIAPPERKY 337
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 158 bits (384), Expect = 3e-39
Identities = 72/82 (87%), Positives = 76/82 (92%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
RCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLSGGT+M+PGIADRMQK
Sbjct: 256 RCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQK 315
Query: 182 EITALAPSTMKIKIIAPPERKY 247
EI LAPSTMKIKIIAPPERKY
Sbjct: 316 EIQHLAPSTMKIKIIAPPERKY 337
Score = 78.2 bits (184), Expect = 5e-15
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF
Sbjct: 341 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 85.8 bits (203), Expect = 2e-17
Identities = 40/80 (50%), Positives = 53/80 (66%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQK 181
R PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSGGTT++ G DR+
Sbjct: 255 RAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLG 314
Query: 182 EITALAPSTMKIKIIAPPER 241
E+ +AP+ KI+I A ER
Sbjct: 315 EMRKIAPADGKIRISASQER 334
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/54 (42%), Positives = 34/54 (62%)
Frame = +1
Query: 199 PIDNED*DHCSSREEVLRMIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 360
P D + S L IGGSI+ASL TF++MW+ K+EY++ G S +H++ F
Sbjct: 321 PADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 74.5 bits (175), Expect = 6e-14
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Frame = +2
Query: 8 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
PE LFQP + +E G+ E + I D+D R D Y + VLSGGTTMYPG+ R++KE+
Sbjct: 262 PEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKEL 321
Query: 188 TAL-----------APSTMKIKIIAPPERKY 247
L A KI+I APP RK+
Sbjct: 322 KQLYLDRVLHGNTDAFQKFKIRIEAPPSRKH 352
Score = 31.9 bits (69), Expect = 0.40
Identities = 15/36 (41%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Frame = +1
Query: 232 SREEVLRMIGGSILASL--STFQQMWISKQEYDESG 333
SR+ ++ +GG++LA+L Q W+SK+EY+E G
Sbjct: 349 SRKHMV-FLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 73.3 bits (172), Expect = 1e-13
Identities = 27/79 (34%), Positives = 53/79 (67%)
Frame = +2
Query: 5 CPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGIA+++++E
Sbjct: 435 CTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQE 494
Query: 185 ITALAPSTMKIKIIAPPER 241
++ + P+T+ ++ P R
Sbjct: 495 LSTVVPNTIHTQVNISPWR 513
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 62.1 bits (144), Expect = 3e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 256 IGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 357
IGGSIL SL TFQQMW+SK EYDESG SIV +KC
Sbjct: 402 IGGSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +2
Query: 2 RCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIA 166
+ PE LF +L E + + S D+DIR L++N ++GG ++ G
Sbjct: 309 KLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGGNSLILGFT 368
Query: 167 DRMQKEITALAPSTMKIKIIAPP---ERKY 247
+R+ + P T+K+++ A P ERKY
Sbjct: 369 ERLNYALATKCPPTIKLRVFAAPTQAERKY 398
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/72 (30%), Positives = 43/72 (59%)
Frame = +2
Query: 8 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 188 TALAPSTMKIKI 223
++ P+ + +
Sbjct: 333 RSMLPAEYGLNV 344
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 58.4 bits (135), Expect = 4e-09
Identities = 22/72 (30%), Positives = 43/72 (59%)
Frame = +2
Query: 8 PEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEI 187
PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +PG +R+++E+
Sbjct: 273 PEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREV 332
Query: 188 TALAPSTMKIKI 223
++ P+ + +
Sbjct: 333 RSMLPAEYGLNV 344
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 8 PEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKE 184
PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+ A ++Q++
Sbjct: 286 PEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRD 345
Query: 185 ITALAPSTMKI 217
+ L+ +++
Sbjct: 346 VKRLSDGRLQM 356
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +1
Query: 181 GNHSSRPIDNED*DHCSSREEVLRMIGGSILASLSTFQQMWISKQEYDESGPSI 342
G +PID + H R V GGS+LAS S F Q+ +K EY E GPSI
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAV--WFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 80 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKII 226
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVI 247
>U40426-4|AAP40527.1| 144|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform b protein.
Length = 144
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 247 VLPLWRSNDLNLHCRWGESCD 185
VLPL NDL+ +WG+ CD
Sbjct: 100 VLPLGTGNDLSRLLKWGKKCD 120
>U40426-3|AAP40528.1| 351|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform c protein.
Length = 351
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 247 VLPLWRSNDLNLHCRWGESCD 185
VLPL NDL+ +WG+ CD
Sbjct: 100 VLPLGTGNDLSRLLKWGKKCD 120
>U40426-2|AAP40526.1| 536|Caenorhabditis elegans Diacylglycerol
kinase protein 2,isoform a protein.
Length = 536
Score = 29.1 bits (62), Expect = 2.8
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 247 VLPLWRSNDLNLHCRWGESCD 185
VLPL NDL+ +WG+ CD
Sbjct: 285 VLPLGTGNDLSRLLKWGKKCD 305
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 419 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>U28741-1|AAA68325.2| 256|Caenorhabditis elegans Hypothetical
protein F35D2.3 protein.
Length = 256
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 316 EYDESGPSIVHRKCF*THRASLPPAARGRLLNSG 417
+Y ++G SIV+ KC T R P R R LN G
Sbjct: 30 DYCKNGGSIVNGKCECTLRYEGPQCERERCLNGG 63
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 419 KPELSSRPRAAGGSDARCV*KHFLCTMEGPD 327
+P + R A GG DA+C+ K + C E PD
Sbjct: 3624 EPNCTERQFACGGDDAKCIPKLWYCDGE-PD 3653
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 262 GSILASLSTFQQMWISKQEYDESGPSIVHRKCF*THRASLPPAAR 396
G A +S F + K++ DE GPS RK S PAA+
Sbjct: 221 GVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,465,230
Number of Sequences: 27780
Number of extensions: 280626
Number of successful extensions: 721
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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