Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30098
         (708 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           25   1.8  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    25   1.8  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          25   2.3  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          25   2.3  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          25   2.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   4.1  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   9.4  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   9.4  

>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 IVTVDYPLFRGRIRQWGIYPPVWAH 283
           I+T+ YP+  G I  W     +W H
Sbjct: 65  ILTLKYPIEHGIITNWDDMEKIWHH 89


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 17/69 (24%), Positives = 29/69 (42%)
 Frame = -3

Query: 559 VPRIQHNPLRLLEYHPSKSV*RAEYTVGYIRSRRDLKDKTSGAFVCNNAPVFESRRRVPI 380
           +  +Q N   +L     K     + T G ++ R  ++D  + AFV   A    S   +  
Sbjct: 258 INNVQRNDFMMLLMKMLKEQMEQDGTAGDLKDRITIEDVAAQAFVFFLAGFETSSTAMSF 317

Query: 379 CLMKYVLNR 353
           CL +  LN+
Sbjct: 318 CLYELALNQ 326


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 IVTVDYPLFRGRIRQWGIYPPVWAH 283
           I+T+ YP+  G +  W     +W H
Sbjct: 65  ILTLKYPIEHGIVTNWDDMEKIWHH 89


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 IVTVDYPLFRGRIRQWGIYPPVWAH 283
           I+T+ YP+  G +  W     +W H
Sbjct: 65  ILTLKYPIEHGIVTNWDDMEKIWHH 89


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 209 IVTVDYPLFRGRIRQWGIYPPVWAH 283
           I+T+ YP+  G +  W     +W H
Sbjct: 65  ILTLKYPIEHGIVTNWDDMEKIWHH 89


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +2

Query: 155 FYFYLL*SPALILKHIASIVTVDYPLFRG 241
           +  +L+ SP L+  HIAS     Y L+RG
Sbjct: 132 YEMFLVMSP-LLFSHIASTKDAGYKLYRG 159


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 441 VLSFRSRRLRIYPTVYSAR*TLLEGWYSSNLKGLCWIRGT 560
           +L  R+RRLR +   Y     LL    +SNL  +  ++ T
Sbjct: 207 ILFLRNRRLRHFNAFYPICLNLLLALIASNLSFILGVQAT 246


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 396  RDSNTGALLHTNAPDVLSFRSRRLR 470
            R+  T  L+  N PD+L +  R+ R
Sbjct: 1090 REIITDILIRANRPDILVYEKRKKR 1114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 744,833
Number of Sequences: 2352
Number of extensions: 15958
Number of successful extensions: 78
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)