Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30097
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA...    51   2e-06
X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein p...    45   1e-04
U59498-1|AAC47295.1|  152|Drosophila melanogaster nucleoplasmin-...    45   1e-04
U59497-1|AAC47294.1|  121|Drosophila melanogaster nucleoplasmin-...    45   1e-04
AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p pro...    45   1e-04
AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA...    45   1e-04
M34639-1|AAA28936.1|  452|Drosophila melanogaster protein ( D.me...    29   6.0  
BT022195-1|AAY51589.1|  452|Drosophila melanogaster IP01133p pro...    29   6.0  
AF019362-1|AAB71371.1|  452|Drosophila melanogaster tailless pro...    29   6.0  
AE014297-4670|AAF57091.1|  452|Drosophila melanogaster CG1378-PA...    29   6.0  

>AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA
           protein.
          Length = 156

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLKVGE+R +R ++EFP+  VTF LVQGSGPV
Sbjct: 75  AVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107


>X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein
           protein.
          Length = 152

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLK GE+R V  D+EF ++ VTF L++GSGPV
Sbjct: 65  AVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97


>U59498-1|AAC47295.1|  152|Drosophila melanogaster
           nucleoplasmin-like protein protein.
          Length = 152

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLK GE+R V  D+EF ++ VTF L++GSGPV
Sbjct: 65  AVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97


>U59497-1|AAC47294.1|  121|Drosophila melanogaster
           nucleoplasmin-like protein-short protein.
          Length = 121

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLK GE+R V  D+EF ++ VTF L++GSGPV
Sbjct: 34  AVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 66


>AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p
           protein.
          Length = 152

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLK GE+R V  D+EF ++ VTF L++GSGPV
Sbjct: 65  AVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97


>AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA
           protein.
          Length = 152

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 20/33 (60%), Positives = 26/33 (78%)
 Frame = +1

Query: 1   AVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 99
           AVLK GE+R V  D+EF ++ VTF L++GSGPV
Sbjct: 65  AVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97


>M34639-1|AAA28936.1|  452|Drosophila melanogaster protein (
           D.melanogaster tailless(tll) mRNA, complete cds. ).
          Length = 452

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 451 LYRLEHDWKRAYVSVSASYILPVKVSANLFIF 546
           L  LE  WK  ++   A Y++P+  +  LF++
Sbjct: 262 LLLLEESWKEFFILAMAQYLMPMNFAQLLFVY 293


>BT022195-1|AAY51589.1|  452|Drosophila melanogaster IP01133p
           protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 451 LYRLEHDWKRAYVSVSASYILPVKVSANLFIF 546
           L  LE  WK  ++   A Y++P+  +  LF++
Sbjct: 262 LLLLEESWKEFFILAMAQYLMPMNFAQLLFVY 293


>AF019362-1|AAB71371.1|  452|Drosophila melanogaster tailless
           protein protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 451 LYRLEHDWKRAYVSVSASYILPVKVSANLFIF 546
           L  LE  WK  ++   A Y++P+  +  LF++
Sbjct: 262 LLLLEESWKEFFILAMAQYLMPMNFAQLLFVY 293


>AE014297-4670|AAF57091.1|  452|Drosophila melanogaster CG1378-PA
           protein.
          Length = 452

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 451 LYRLEHDWKRAYVSVSASYILPVKVSANLFIF 546
           L  LE  WK  ++   A Y++P+  +  LF++
Sbjct: 262 LLLLEESWKEFFILAMAQYLMPMNFAQLLFVY 293


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,683,905
Number of Sequences: 53049
Number of extensions: 459539
Number of successful extensions: 943
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)