Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30095
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 163 1e-40
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 163 1e-40
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 163 1e-40
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 149 3e-36
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 149 3e-36
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 128 7e-30
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 128 7e-30
Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical pr... 30 1.8
AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like prot... 30 1.8
AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl cyc... 29 3.2
Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger p... 29 4.2
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 29 5.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 163 bits (397), Expect = 1e-40
Identities = 87/173 (50%), Positives = 107/173 (61%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NGPENIWRNLSLFDSVFAQDE 600
YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K + D+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 601 MIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
MID IGVT+G + HTKKL P + + RKVACIGAWHP RV+FT
Sbjct: 216 MIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACIGAWHP-SRVAFT 265
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 163 bits (397), Expect = 1e-40
Identities = 87/173 (50%), Positives = 107/173 (61%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NGPENIWRNLSLFDSVFAQDE 600
YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K + D+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 601 MIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
MID IGVT+G + HTKKL P + + RKVACIGAWHP RV+FT
Sbjct: 216 MIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACIGAWHP-SRVAFT 265
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 163 bits (397), Expect = 1e-40
Identities = 87/173 (50%), Positives = 107/173 (61%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NGPENIWRNLSLFDSVFAQDE 600
YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K + D+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 601 MIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
MID IGVT+G + HTKKL P + + RKVACIGAWHP RV+FT
Sbjct: 216 MIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACIGAWHP-SRVAFT 265
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 163 bits (397), Expect = 1e-40
Identities = 87/173 (50%), Positives = 107/173 (61%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NGPENIWRNLSLFDSVFAQDE 600
YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K + D+VFAQDE
Sbjct: 156 YCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDE 215
Query: 601 MIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
MID IGVT+G + HTKKL P + + RKVACIGAWHP RV+FT
Sbjct: 216 MIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACIGAWHP-SRVAFT 265
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/73 (53%), Positives = 46/73 (63%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQM 459
YCS +RVIAHTQM
Sbjct: 156 YCSSIRVIAHTQM 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +1
Query: 583 VFAQDEMIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
V A +MID IGVT+G + HTKKL H + RKVACIGAWHP RV+FT
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSR-WHTKKLPRKTH-KGLRKVACIGAWHP-SRVAFT 217
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 149 bits (360), Expect = 3e-36
Identities = 62/83 (74%), Positives = 75/83 (90%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIVEA 181
F PKKRSR +RG++KAFPKDD SKP+HLTAF+GYKAGMTH+VR+ D+PGSK+NKKE+VEA
Sbjct: 16 FTPKKRSRTYRGRIKAFPKDDKSKPIHLTAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEA 75
Query: 182 VTIIETPPMVCVGVVGYIETPHG 250
VTI+ETPPMV GV GY++TP G
Sbjct: 76 VTIVETPPMVIAGVTGYVDTPQG 98
Score = 88.2 bits (209), Expect = 6e-18
Identities = 39/73 (53%), Positives = 46/73 (63%)
Frame = +1
Query: 241 PSWTTALLTVWAEHMSEDCRRRFYKNWYXXXXXXXXXXXXXWQDELGRKSIEKDFKKMIR 420
P AL T+WAEH+SE+ RRRFY NW WQDE G+K IE DF K+ +
Sbjct: 96 PQGPRALTTIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKK 155
Query: 421 YCSVVRVIAHTQM 459
YCS +RVIAHTQM
Sbjct: 156 YCSSIRVIAHTQM 168
Score = 52.0 bits (119), Expect = 5e-07
Identities = 31/59 (52%), Positives = 36/59 (61%)
Frame = +1
Query: 583 VFAQDEMIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACIGAWHPFLRVSFT 759
V A +MID IGVT+G + HTKKL H + RKVACIGAWHP RV+FT
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSR-WHTKKLPRKTH-KGLRKVACIGAWHP-SRVAFT 217
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (308), Expect = 7e-30
Identities = 70/132 (53%), Positives = 87/132 (65%)
Frame = +1
Query: 364 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NG 543
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K +
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 544 PENIWRNLSLFDSVFAQDEMIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACI 723
D+VFAQDEMID IGVT+G + HTKKL P + + RKVACI
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACI 156
Query: 724 GAWHPFLRVSFT 759
GAWHP RV+FT
Sbjct: 157 GAWHP-SRVAFT 167
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPK 58
F PKKRSR +RG++KAF K
Sbjct: 16 FTPKKRSRTYRGRIKAFTK 34
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (308), Expect = 7e-30
Identities = 70/132 (53%), Positives = 87/132 (65%)
Frame = +1
Query: 364 WQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLTVVPSRTK*NG 543
WQDE G+K IE DF K+ +YCS +RVIAHTQMK+L++RQKKAH++EIQ+ K +
Sbjct: 39 WQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDW 98
Query: 544 PENIWRNLSLFDSVFAQDEMIDCIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVACI 723
D+VFAQDEMID IGVT+G + HTKKL P + + RKVACI
Sbjct: 99 AREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSR-WHTKKL-PRKTHKGLRKVACI 156
Query: 724 GAWHPFLRVSFT 759
GAWHP RV+FT
Sbjct: 157 GAWHP-SRVAFT 167
Score = 32.7 bits (71), Expect = 0.34
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +2
Query: 2 FYPKKRSRRHRGKVKAFPK 58
F PKKRSR +RG++KAF K
Sbjct: 16 FTPKKRSRTYRGRIKAFTK 34
>Z70756-3|CAC42337.1| 2514|Caenorhabditis elegans Hypothetical protein
T06E4.3b protein.
Length = 2514
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 565 LSLFDSVFAQDEMID-CIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVAC 720
+ + V + E +D +G+T G+ +++ F H K + T+ FR+VAC
Sbjct: 2256 IEFMEGVTSFYETLDKLMGMTSGEWLEKLKFWNTHMKPMGKEERTKYFREVAC 2308
>Z70756-2|CAA94790.2| 2531|Caenorhabditis elegans Hypothetical protein
T06E4.3a protein.
Length = 2531
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 565 LSLFDSVFAQDEMID-CIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVAC 720
+ + V + E +D +G+T G+ +++ F H K + T+ FR+VAC
Sbjct: 2273 IEFMEGVTSFYETLDKLMGMTSGEWLEKLKFWNTHMKPMGKEERTKYFREVAC 2325
>AB018598-1|BAA33886.1| 2514|Caenorhabditis elegans ATM-like protein
protein.
Length = 2514
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 565 LSLFDSVFAQDEMID-CIGVTKGQRIQRCHFLVGHTKKLTPVRHTRVFRKVAC 720
+ + V + E +D +G+T G+ +++ F H K + T+ FR+VAC
Sbjct: 2256 IEFMEGVTSFYETLDKLMGMTSGEWLEKLKFWNTHMKPMGKEERTKYFREVAC 2308
>AF016655-12|AAK31438.3| 1143|Caenorhabditis elegans Guanylyl
cyclase protein 19 protein.
Length = 1143
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 280 APPRQSKER*SMRGL--NVSNNTDTNHRRSLDDGDSLHDLFLVD 155
APP++ KER S R L SN TDT+ + + D+ S + +F +D
Sbjct: 507 APPKRDKERMSKRSLQSGPSNITDTS-KMTFDNTFSNYSIFYLD 549
>Z70754-2|CAC42308.1| 764|Caenorhabditis elegans Hypothetical
protein F58E6.1b protein.
Length = 764
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 825 FPWFHFKYRWMNNPFLDPARATSERHPK 742
FP+F FKY +MN L+ R +PK
Sbjct: 618 FPYFSFKYTFMNRTALNRRRKNLANNPK 645
>Z70754-1|CAA94771.2| 966|Caenorhabditis elegans Hypothetical
protein F58E6.1a protein.
Length = 966
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 825 FPWFHFKYRWMNNPFLDPARATSERHPK 742
FP+F FKY +MN L+ R +PK
Sbjct: 618 FPYFSFKYTFMNRTALNRRRKNLANNPK 645
>AF164113-1|AAD45535.1| 810|Caenorhabditis elegans zinc finger
protein STAT-B protein.
Length = 810
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 825 FPWFHFKYRWMNNPFLDPARATSERHPK 742
FP+F FKY +MN L+ R +PK
Sbjct: 664 FPYFSFKYTFMNRTALNRRRKNLANNPK 691
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = -3
Query: 621 DTNAVNHFILGKHRIEQG*VSPDVL 547
D+N +NHF + KH++EQ + P+ +
Sbjct: 467 DSNVINHFAVTKHQMEQLDLRPETV 491
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,461,965
Number of Sequences: 27780
Number of extensions: 492475
Number of successful extensions: 1298
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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