Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30093
(750 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 153 3e-36
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 138 1e-31
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 132 1e-29
UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3; Euka... 120 4e-26
UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma j... 110 4e-23
UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8 ... 79 9e-14
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 77 5e-13
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 60 6e-08
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 52 1e-05
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 52 2e-05
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 51 4e-05
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 51 4e-05
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 51 4e-05
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 50 5e-05
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 49 1e-04
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 48 2e-04
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 46 0.001
UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 44 0.005
UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264, ... 43 0.009
UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1; ... 43 0.009
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 42 0.012
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 40 0.065
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 40 0.065
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 40 0.086
UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole gen... 39 0.15
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 38 0.26
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 37 0.46
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 37 0.61
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 36 0.81
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 36 0.81
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 36 0.81
UniRef50_A1SQS0 Cluster: Putative uncharacterized protein precur... 36 1.1
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 35 1.9
UniRef50_UPI000023E4D8 Cluster: hypothetical protein FG07125.1; ... 34 3.3
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 34 3.3
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 33 5.7
UniRef50_Q8GBE0 Cluster: Yts1J protein; n=3; Yersinia|Rep: Yts1J... 33 7.5
UniRef50_Q03XZ4 Cluster: Predicted Co/Zn/Cd cation transporter; ... 33 7.5
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 33 7.5
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 33 7.5
UniRef50_Q0KHU0 Cluster: CG2174-PB, isoform B; n=3; Drosophila m... 33 9.9
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 153 bits (372), Expect = 3e-36
Identities = 70/83 (84%), Positives = 77/83 (92%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60
Query: 199 VHFRDPYKFKTRKELFIAPKPLH 267
VHFRDPY++K RKELFIAP+ +H
Sbjct: 61 VHFRDPYRYKIRKELFIAPEGMH 83
Score = 100 bits (239), Expect = 4e-20
Identities = 61/110 (55%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Frame = +3
Query: 405 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTTS 584
SGN+ATVI HN D K+TRVKLPSGAKKV+PS ++MVGIVAGGGRIDKPI ++ + +
Sbjct: 130 SGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAY-HK 188
Query: 585 NKVKRN-WLAIM*RGVGH*NLLSIPSRVVVTNHTL*GKASTGQRGEDHSR 731
KVKRN W + RGV N + P NH GKAST +RG R
Sbjct: 189 YKVKRNSWPKV--RGVAM-NPVEHPHG--GGNHQHIGKASTVKRGTSAGR 233
Score = 89.4 bits (212), Expect = 8e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
+TGQFVYCG+KATL++GNVMP+ MPEGTI+CNLEEK GDRGRLAR
Sbjct: 83 HTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 138 bits (335), Expect = 1e-31
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKPLH 267
V FRDPY+FK R ELFIA + +H
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIH 83
Score = 89.8 bits (213), Expect = 6e-17
Identities = 45/77 (58%), Positives = 59/77 (76%), Gaps = 1/77 (1%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
ASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S +++VG+VAGGGRIDKPI ++ + +
Sbjct: 129 ASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAY-H 187
Query: 582 SNKVKRN-WLAIM*RGV 629
K KRN W + RGV
Sbjct: 188 KYKAKRNCWPRV--RGV 202
Score = 85.4 bits (202), Expect = 1e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
+TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LAR
Sbjct: 83 HTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLAR 128
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 132 bits (318), Expect = 1e-29
Identities = 59/83 (71%), Positives = 70/83 (84%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIR+QRKG GSVF +HTK RKG LR++D+AERHGY+KGVVKDI+HDPGRGAPLA
Sbjct: 1 MGRVIRSQRKGPGSVFKAHTKHRKGKAALRAVDFAERHGYVKGVVKDIVHDPGRGAPLAK 60
Query: 199 VHFRDPYKFKTRKELFIAPKPLH 267
V FRDPYK+K R E FIA + ++
Sbjct: 61 VTFRDPYKYKMRTETFIATEGMY 83
Score = 95.5 bits (227), Expect = 1e-18
Identities = 57/111 (51%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
ASGN+ATVI HNPD K++RVKLPSG+KKV+PS +++VGIVAGGGRIDKP+ ++ + +
Sbjct: 105 ASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAY-H 163
Query: 582 SNKVKRN-WLAIM*RGVGH*NLLSIPSRVVVTNHTL*GKASTGQRGEDHSR 731
K KRN W + RGV N + P NH GKAST +R R
Sbjct: 164 KYKAKRNCWPKV--RGVAM-NPVEHPHG--GGNHQHIGKASTVRRDTSAGR 209
Score = 37.5 bits (83), Expect = 0.35
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARGLWKL 415
YTGQF+YCGKKA L++ + + T++ + + R +L G K+
Sbjct: 83 YTGQFIYCGKKANLQIRGKLARASGNYATVISHNPDTKKSRVKLPSGSKKV 133
>UniRef50_Q41960 Cluster: 60S ribosomal protein KD4/L2; n=3;
Eukaryota|Rep: 60S ribosomal protein KD4/L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 123
Score = 120 bits (289), Expect = 4e-26
Identities = 56/77 (72%), Positives = 64/77 (83%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MGRVIRAQRK AGSVF SHT RKG K RSLD+ ER+GY+KGVV +IIHDPGRGAPLA
Sbjct: 1 MGRVIRAQRKVAGSVFKSHTHHRKGPAKFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60
Query: 199 VHFRDPYKFKTRKELFI 249
V FR P++FK +KELF+
Sbjct: 61 VTFRHPFRFKKQKELFV 77
Score = 43.2 bits (97), Expect = 0.007
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +2
Query: 278 VYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 385
+YCGKKATL VGNV+P+ ++PEG + +G R
Sbjct: 88 LYCGKKATLVVGNVLPLRSIPEGAXCLQRRDHVGYR 123
>UniRef50_Q5BZD1 Cluster: SJCHGC07017 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07017 protein - Schistosoma
japonicum (Blood fluke)
Length = 112
Score = 110 bits (264), Expect = 4e-23
Identities = 50/69 (72%), Positives = 58/69 (84%)
Frame = +1
Query: 31 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 210
IR+QRKGAG VF +HTK RKGA +LR +D+AERHGYI+GVVK+IIHDPGRGAPLA V FR
Sbjct: 1 IRSQRKGAGGVFKAHTKHRKGAARLRPVDFAERHGYIRGVVKEIIHDPGRGAPLAKVAFR 60
Query: 211 DPYKFKTRK 237
D Y +K K
Sbjct: 61 DVYSYKLIK 69
>UniRef50_Q3T1K8 Cluster: Rpl8 protein; n=8; Coelomata|Rep: Rpl8
protein - Rattus norvegicus (Rat)
Length = 47
Score = 79.4 bits (187), Expect = 9e-14
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVK 156
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VK
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVK 46
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 77.0 bits (181), Expect = 5e-13
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
Y+GQ++YCG KA+L +GNV+P+G PEGT+VCN+E K GDRG +AR
Sbjct: 74 YSGQYIYCGSKASLHIGNVLPIGQCPEGTVVCNVESKPGDRGIIAR 119
Score = 51.6 bits (118), Expect = 2e-05
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1
Query: 142 KGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPKPLH 267
+G+VK I HDPGRGAPLA V FR+P ++ KELFI + L+
Sbjct: 33 RGLVKSIEHDPGRGAPLARVVFRNPRQYGLDKELFICAEGLY 74
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAK 482
ASGN+ATVI HN D + TR++LPSGAK
Sbjct: 120 ASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/56 (48%), Positives = 38/56 (67%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWK 569
A G +A VIG P+ +T ++LPSG + SR ++ VGIVAGGGRI+KP ++ K
Sbjct: 121 AGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGK 176
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/46 (47%), Positives = 33/46 (71%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
Y GQ V GK A+ + GN+M +G +PEGT++ N+E++ GD G+ AR
Sbjct: 75 YVGQVVEIGKGASPKTGNIMILGEIPEGTMIFNVEKRAGDGGKFAR 120
Score = 38.7 bits (86), Expect = 0.15
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 19 MGRVIRAQRKG-AGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ I QR+G GS F S + KR G + L GY V DI+H+PG AP+A
Sbjct: 1 MGKRILVQRRGRGGSQFRSPSWKRDGPVRYPPLGVISGKGY----VVDILHEPGLNAPVA 56
Query: 196 VV 201
+
Sbjct: 57 KI 58
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
Y GQ + G A E GN++P+G +PEGT V N+E + GD G+LAR
Sbjct: 75 YVGQIIEIGPAAKPEAGNILPLGKIPEGTEVFNVELRPGDGGKLAR 120
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/75 (34%), Positives = 43/75 (57%)
Frame = +3
Query: 405 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTTS 584
+G++A V+G +T ++LPSG K +P+ ++ +GI AG GRI+KPI ++ +
Sbjct: 122 AGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAYHKW 179
Query: 585 NKVKRNWLAIM*RGV 629
R W + RGV
Sbjct: 180 KVKARKWPRV--RGV 192
Score = 35.9 bits (79), Expect = 1.1
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ +R QR G G+ + S G K L ++G V ++IHDPGR PLA
Sbjct: 1 MGKRLRQQRAGRGTPTYRSRAHIHPGPAKYPPLS----GDTLRGKVVELIHDPGRYVPLA 56
Query: 196 VVHFRDPYKF 225
V D +F
Sbjct: 57 RVVREDGVEF 66
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +3
Query: 399 VASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGH 575
+ +G+++ V+ H + T +K+PSG K + S + +VG+VAGGG DKP+ ++ H
Sbjct: 114 MVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAH 172
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLA 397
YTGQ + G A +++GN+ + +PEG V ++E GD G A
Sbjct: 69 YTGQKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFA 113
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 50.8 bits (116), Expect = 4e-05
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
Y + + CG +A GNV+P+ +P G VCN+EEK GD G+LAR
Sbjct: 109 YLNKTIACGLQARPITGNVLPLFNIPNGVFVCNVEEKEGDGGKLAR 154
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGH 575
++G F V+ H+ T++KLPS K+L S ++ +G+VAGGG+ +KP+ ++ K +
Sbjct: 155 SAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLLKAGKNY 212
Score = 44.0 bits (99), Expect = 0.004
Identities = 25/83 (30%), Positives = 40/83 (48%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
MG++I AQRKG + +R G +S+ E++ IKG++ D + P
Sbjct: 27 MGKIISAQRKGKIGFQKQGSSRRIGKISYKSMTNEEKYSVIKGIISKFHIDTVKKVPAIK 86
Query: 199 VHFRDPYKFKTRKELFIAPKPLH 267
+ F FK EL+IA + L+
Sbjct: 87 IKFNVTKYFKNYYELYIAVEKLY 109
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 50.8 bits (116), Expect = 4e-05
Identities = 34/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
A G +AT+I H D RT V+LPSG + R ++ +G+++GGG+ +KP ++ K +
Sbjct: 125 APGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKAGKKYYH 182
Query: 582 SNKVKRNWLAIM*RGVGH*NLLSIPSRVVVTNHTL*GKASTGQRGEDHSR 731
W + RGV + ++ NH GK +T RG+ R
Sbjct: 183 MRSKGGKWPKV--RGVA---MNAVDHPFGGGNHQSPGKPTTIARGDPPGR 227
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGS-VFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ IR QR G G + + + + +G + R D E+ G + G V +++HDP R AP+A
Sbjct: 1 MGKRIRPQRLGRGGPTYRAPSHRYRGRIEHRPYDEQEKKGKVVGKVVELLHDPARNAPVA 60
Query: 196 VVHFRD 213
V F D
Sbjct: 61 RVRFED 66
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + CG A ++ GN +P+ +PEG + N+E + GD G+ AR
Sbjct: 81 GDIIECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFAR 124
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 50.8 bits (116), Expect = 4e-05
Identities = 26/56 (46%), Positives = 39/56 (69%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWK 569
+SG +ATV+ H +A RT V +PSG K L + +++VGIVAG GR+D+P ++ K
Sbjct: 122 SSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGK 175
Score = 50.0 bits (114), Expect = 6e-05
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + CG A ++ GN++P+G +PEG +CN+E K D G+ R
Sbjct: 78 GNIIECGDDAEVKPGNIVPIGNVPEGFFICNVESKPNDGGKFVR 121
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
GQ + GK A + GN++ VG +PEGTI+ N+E+ GD G+ AR
Sbjct: 76 GQKIQIGKNAAISNGNIVEVGNVPEGTIISNIEKTRGDGGKFAR 119
Score = 42.3 bits (95), Expect = 0.012
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ + QR G G + F S + +R G K+ +++ G G V DI+H+PG APLA
Sbjct: 1 MGKKLLQQRAGRGGINFRSPSWRRVGKAKIPNIE-----GEHIGKVIDIVHNPGTNAPLA 55
Query: 196 VVHFRDPYKF 225
++ D KF
Sbjct: 56 LIKLDDGTKF 65
Score = 37.9 bits (84), Expect = 0.26
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
++G + V+G D + VKL S + S +++VG+VAGGG +KP+ ++ +
Sbjct: 120 SAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNNYWK 177
Query: 582 SNKVKRNWLAIM*RGVGH*NLLSIP 656
+ W + RGV N +S P
Sbjct: 178 YKVKAKKWPHV--RGVAM-NAVSHP 199
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/46 (50%), Positives = 31/46 (67%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
YTGQ V G A GN++P+ A+PEGT + N+E + GD G+LAR
Sbjct: 79 YTGQKVQIGPNAAPVNGNILPLYAIPEGTQIFNVEIRPGDGGKLAR 124
Score = 38.7 bits (86), Expect = 0.15
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
+ G +A ++G + ++ ++LPSG K + ++ ++ +GI AG GR +KP+ ++ +
Sbjct: 125 SGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLLKAGNAYYK 182
Query: 582 SNKVKRNWLAIM*RGV 629
+ W + RGV
Sbjct: 183 WKAKAKKWPVV--RGV 196
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/68 (33%), Positives = 42/68 (61%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
ASG+FA ++ D + V+LPSG K L + ++++G++AGGGR +KP ++ +
Sbjct: 122 ASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVKAGNKYYW 179
Query: 582 SNKVKRNW 605
++ R+W
Sbjct: 180 ASSRNRHW 187
Score = 43.2 bits (97), Expect = 0.007
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G VY GK+A +G++ P+ +PEGT + LE GD G+L R
Sbjct: 78 GDTVYYGKEAPNAIGSIKPLSEIPEGTKIYMLENNPGDGGKLVR 121
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 45.6 bits (103), Expect = 0.001
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G+ + G K+ +E GNV+ + +P+GTIVCN+E+ GD G + +
Sbjct: 79 GETLQFGLKSKIEKGNVISIQNIPDGTIVCNIEKHFGDGGAIVK 122
Score = 40.7 bits (91), Expect = 0.037
Identities = 28/76 (36%), Positives = 40/76 (52%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTT 581
++G ATV H + VKLPSG L + ++M+G +AGGG ++P F S G
Sbjct: 123 SAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERP-FMSAGGKWR 179
Query: 582 SNKVKRNWLAIM*RGV 629
+ K K I+ RGV
Sbjct: 180 NFKAKGKKYPIV-RGV 194
Score = 33.1 bits (72), Expect = 7.5
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLR--SLDYAERHGYIKGVVKDIIHDPGRGAPL 192
MG+ +R+G G T K K +E+H +G + D++H+ GR APL
Sbjct: 1 MGKRPLVRRRGRGGNQFRSTSTGKVGTKANYPRFPLSEQH---EGEIIDLVHERGREAPL 57
Query: 193 AVVHFRD 213
A V F D
Sbjct: 58 AKVRFED 64
>UniRef50_A5C022 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEG 346
YTGQFV C KKATL V NV+P+ + PEG
Sbjct: 49 YTGQFVCCSKKATLIVDNVLPLRSTPEG 76
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 43.6 bits (98), Expect = 0.005
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKG-HT 578
++G FA V+ H R +KLPSG+ + R ++ VG+VA G ID PI ++ H
Sbjct: 117 SAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVAASGIIDAPILKAGTHVHY 173
Query: 579 TSNKVKR 599
+K KR
Sbjct: 174 LRSKAKR 180
Score = 34.7 bits (76), Expect = 2.5
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
Y GQ + G T+ G + +P+G+ V N+E GD G R
Sbjct: 71 YVGQKIVAGNVDTINPGTTTVLANIPDGSYVYNIESSPGDGGEFCR 116
Score = 33.1 bits (72), Expect = 7.5
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPL 192
MG+ I QR+G GS+ V + + ++ L E VVKDIIH PGR +PL
Sbjct: 1 MGKHIIPQRRGHGSL-VYRSPSHRHVVDVKHLKPGEY------VVKDIIHAPGRNSPL 51
>UniRef50_A7R935 Cluster: Chromosome undetermined scaffold_3264,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3264, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 66
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSVFVSHTKKRK 90
MGRVIRAQRKG GS+F SHT RK
Sbjct: 1 MGRVIRAQRKGVGSIFKSHTHHRK 24
>UniRef50_A5AS87 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = -3
Query: 388 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEA 257
T++TH + +AHNGTL S R +I+N + L+TI++L V A
Sbjct: 7 TTVTHMVLNVAHNGTLGDGSKRQYIANNEIGLLATIDELVGVHA 50
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 42.3 bits (95), Expect = 0.012
Identities = 19/44 (43%), Positives = 29/44 (65%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G V G +A ++VGN +P+ +P GT++ N+E K G G+LAR
Sbjct: 113 GMQVQSGAEADIKVGNALPLTNIPVGTVIHNIELKPGKGGQLAR 156
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 39.9 bits (89), Expect = 0.065
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + + A ++VGN P+ +PEGT++ N+E K G G++AR
Sbjct: 114 GMKIVASEHADIKVGNAAPLKNIPEGTLIHNVELKPGKGGQMAR 157
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 39.9 bits (89), Expect = 0.065
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G V G ++ GN MP+ +MP GTI+ N+E G G++AR
Sbjct: 113 GDQVVAGNSVDVKPGNAMPLSSMPVGTIIHNVELMPGKGGQIAR 156
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + G K+ + GNV+ V +P+GT VCN+E+ GD G + +
Sbjct: 78 GSSMNFGLKSEIRDGNVISVQNIPDGTTVCNVEKHYGDGGAIVK 121
Score = 36.3 bits (80), Expect = 0.81
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFES 563
A GN ATV H +KLPSG L + ++MVG +AGGG ++P +
Sbjct: 123 AGGN-ATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFMSA 173
Score = 35.9 bits (79), Expect = 1.1
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 19 MGRVIRAQRKGAGSV-FVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLA 195
MG+ +R+G G + F + T + K + + E+ +G V D++H+ GR APLA
Sbjct: 1 MGKRPLVRRRGRGGMQFRAATTGKIARAKYPAFELGEQR---EGTVIDLVHERGRDAPLA 57
Query: 196 VVHFRD 213
+ F D
Sbjct: 58 KIRFED 63
>UniRef50_A7PXN3 Cluster: Chromosome chr12 scaffold_36, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr12 scaffold_36, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 166
Score = 38.7 bits (86), Expect = 0.15
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = -3
Query: 388 TSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLACVEA 257
T +TH + +AHNGTL S R +I+N + L+ +++L V A
Sbjct: 19 TMVTHMVLNVAHNGTLGDGSKRQNIANNEIGLLAIVDELVGVHA 62
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 37.9 bits (84), Expect = 0.26
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + G + +++GN +P+ MP GT + N+E +G G+LAR
Sbjct: 111 GDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLAR 154
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 37.1 bits (82), Expect = 0.46
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVA----GGGRIDKPIFESWK 569
A+G FA +I + + V+LPSG K++ SR ++ VGIV+ G ++DK W
Sbjct: 352 AAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSRCRATVGIVSNLHHGKRKLDKAGQSRWL 411
Query: 570 G 572
G
Sbjct: 412 G 412
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 36.7 bits (81), Expect = 0.61
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = -2
Query: 545 VNTSTSSNNTDHALLP*WQNLLGSRR*LYSCTLSIRIVS--NHSGEVSR 405
V+T+T+SNNT++ + WQN L +RR L + T +R+ S N +V R
Sbjct: 37 VDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVLRLASCQNDQSQVVR 85
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 36.3 bits (80), Expect = 0.81
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 46 KGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYK 222
+ G + V H K K R +D+ IKG+V+ I +DP R A +A++ + D K
Sbjct: 18 RSRGKISVRHIGK-KHKKFYRKIDFKRDKSNIKGIVESIHYDPNRNARIALIKYLDGEK 75
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 36.3 bits (80), Expect = 0.81
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G FV G + GN +P+ ++P GT+V N+E G G++ R
Sbjct: 207 GDFVSSGPNVEIRTGNALPLISIPLGTLVHNIELYPGSGGQVVR 250
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 36.3 bits (80), Expect = 0.81
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 302 LEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR--GLW 409
++ GN MP+ +PEGTIV N+E G G++AR G W
Sbjct: 149 IKPGNAMPLKYIPEGTIVHNIEFIPGKGGQIARAAGTW 186
>UniRef50_A1SQS0 Cluster: Putative uncharacterized protein
precursor; n=1; Nocardioides sp. JS614|Rep: Putative
uncharacterized protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 400
Score = 35.9 bits (79), Expect = 1.1
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3
Query: 529 PATIPTMLCCLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEA 401
P +PT C LD RT DG TL RLA+G+ T A A
Sbjct: 223 PDEVPTYRCRLDDRTVACTDGLTTLRRLAAGMHRFTAASVDPA 265
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 35.1 bits (77), Expect = 1.9
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Frame = +3
Query: 345 VPLCAILKRKWVIEVVWHV--------ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSR 500
+PL I WV ++ H A+G +A +I A + V+LPSG +K++ SR
Sbjct: 364 IPLADIRMGTWVHDIECHPGQGAKLARAAGTYAKII--KEPASQCLVRLPSGVEKLIDSR 421
Query: 501 QQSMVGIVA----GGGRIDKPIFESWKG 572
++ +GIV+ G ++ K W G
Sbjct: 422 CRATIGIVSNPNHGARKLRKAGQSRWSG 449
>UniRef50_UPI000023E4D8 Cluster: hypothetical protein FG07125.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07125.1 - Gibberella zeae PH-1
Length = 293
Score = 34.3 bits (75), Expect = 3.3
Identities = 19/43 (44%), Positives = 23/43 (53%)
Frame = -3
Query: 649 LNRFQWPTPRYIMASQLRLTLLLVVWPFQLSKIGLSIRPPPAT 521
L F WP +Y S L +LL+VV L K+ L RPPP T
Sbjct: 59 LRIFYWPQAQYD-TSLLLQSLLMVVVQVALLKVALDFRPPPPT 100
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 34.3 bits (75), Expect = 3.3
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVA 527
A+G FA +I + + V+LPSG K++ SR ++ +GIV+
Sbjct: 390 AAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVS 431
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 33.5 bits (73), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
G + G+ A ++VGN +P+ +P GT+V +E K G + AR
Sbjct: 119 GSEIVAGEFAAIKVGNSLPLRNIPVGTVVHCVEGKPGKGAQYAR 162
>UniRef50_Q8GBE0 Cluster: Yts1J protein; n=3; Yersinia|Rep: Yts1J
protein - Yersinia enterocolitica (type 0:8)
Length = 199
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 357 AILKRKWVIEVVWHVASGNFATVIGHNPDAKRTRVKL 467
A+L R + +V WH+ G + H PD+++ R KL
Sbjct: 105 ALLPRSSLEKVTWHIQQGKLERLSHHQPDSQQARPKL 141
>UniRef50_Q03XZ4 Cluster: Predicted Co/Zn/Cd cation transporter;
n=1; Leuconostoc mesenteroides subsp. mesenteroides ATCC
8293|Rep: Predicted Co/Zn/Cd cation transporter -
Leuconostoc mesenteroides subsp. mesenteroides (strain
ATCC 8293 /NCDO 523)
Length = 301
Score = 33.1 bits (72), Expect = 7.5
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -3
Query: 472 DGSFTLVRLASGLCPITVAKFPEATCQTTSITHFLFK 362
D FT++ L SG+ IT++K+ T + HF+F+
Sbjct: 40 DSYFTIITLVSGIAAITISKYSARTSERFPNGHFMFE 76
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 33.1 bits (72), Expect = 7.5
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +3
Query: 402 ASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVA 527
A+G +A V+ P AK ++LPSGA+K + SR + +GIV+
Sbjct: 327 AAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVS 366
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 33.1 bits (72), Expect = 7.5
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 269 GQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLE 367
G +Y G+ L++GN++P+ +P G+ + N+E
Sbjct: 109 GDIIYIGETIELKIGNILPIKKIPCGSWIHNIE 141
>UniRef50_Q0KHU0 Cluster: CG2174-PB, isoform B; n=3; Drosophila
melanogaster|Rep: CG2174-PB, isoform B - Drosophila
melanogaster (Fruit fly)
Length = 2693
Score = 32.7 bits (71), Expect = 9.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 145 GVVKDIIHDPGRGAPLAVVHF-RDPYKFKTRKELFIAPKPLHRPICL 282
GVV ++ G G A + + R P+K + RKE+F +P+ P+ L
Sbjct: 1771 GVVSGVLMGSGSGGSTACLTYNRVPWKLRVRKEVFQPHEPIGPPVAL 1817
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,921,667
Number of Sequences: 1657284
Number of extensions: 18887260
Number of successful extensions: 47671
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 45804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47661
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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