Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30093
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   142   1e-35
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.3  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    24   4.4  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   5.8  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  142 bits (344), Expect = 1e-35
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +1

Query: 19  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 198
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 199 VHFRDPYKFKTRKELFIAPKPLH 267
           V+FRDPY+F+  K+LFIA + ++
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMY 83



 Score =  103 bits (248), Expect = 4e-24
 Identities = 63/110 (57%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
 Frame = +3

Query: 405 SGNFATVIGHNPDAKRTRVKLPSGAKKVLPSRQQSMVGIVAGGGRIDKPIFESWKGHTTS 584
           SGN+A+VI HNPD KRTRVKLPSGAKKVLPS  ++MVGIVAGGGRIDKPI ++ + +   
Sbjct: 130 SGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAY-HK 188

Query: 585 NKVKRN-WLAIM*RGVGH*NLLSIPSRVVVTNHTL*GKASTGQRGEDHSR 731
            KVKRN W  +  RGV   N +  P      NH   GKAST +RG    R
Sbjct: 189 YKVKRNCWPKV--RGVAM-NPVEHPHG--GGNHQHIGKASTVKRGTPPGR 233



 Score = 88.6 bits (210), Expect = 2e-19
 Identities = 36/46 (78%), Positives = 43/46 (93%)
 Frame = +2

Query: 263 YTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLAR 400
           YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK GDRG+LAR
Sbjct: 83  YTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKTGDRGKLAR 128


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 127 RHGYIKGVVKDIIHDP 174
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 127 RHGYIKGVVKDIIHDP 174
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +3

Query: 192 GCCTLPRSIQVQDKEGALHCSEASTQANLFIVER 293
           GCC LP +   Q K+ + + +  +T+   +  E+
Sbjct: 16  GCCALPANTNAQTKQDSSNNNNRTTELFAYPAEQ 49


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -3

Query: 397 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 269
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 878,898
Number of Sequences: 2352
Number of extensions: 20341
Number of successful extensions: 36
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)