Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30092
         (661 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           27   0.16 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.1  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          23   3.4  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.9  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   7.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.9  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.9  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    21   7.9  

>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +2

Query: 419 QGQKEEELVPSGYV*LHGFRYLGLVGTER 505
           QG +E++++ S  V L G RY+ L GT+R
Sbjct: 48  QGFEEQDILTSSGVTLAGNRYIYLSGTDR 76


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 102 KNPVIPNHNVDDNWHS*SIHTM 167
           KN +I   N DD++H  S HT+
Sbjct: 208 KNTLIIYQNADDSFHRLSSHTL 229


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 93  FKVKNPVIPNHNVDDN 140
           F V   ++  HNVDDN
Sbjct: 406 FVVNKDILHEHNVDDN 421


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = -1

Query: 571 SSAWRFSNKFYFPF 530
           S +WR +N  ++P+
Sbjct: 216 SRSWRITNNLFYPY 229


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 390 MCGCCRKAINRDRKKRNWCLPVMY 461
           + GC  +A NRD KK ++ +   Y
Sbjct: 175 LLGCFPRATNRDIKKCSYNMDSSY 198


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 233 NMSTIGIFIERYCNPCHRKLCCSI 304
           N   I +++ R C  C  K C ++
Sbjct: 227 NNCEIDMYMRRKCQECRLKKCLTV 250


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = +1

Query: 214  LLSLRDEHVYNRNLYRAILQ 273
            +LSLRDE+ Y+ +++   L+
Sbjct: 1104 MLSLRDENRYHEDIFGITLR 1123


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +2

Query: 233 NMSTIGIFIERYCNPCHRKLCCSI 304
           N   I +++ R C  C  K C ++
Sbjct: 24  NNCEIDMYMRRKCQECRLKKCLTV 47


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,099
Number of Sequences: 438
Number of extensions: 5010
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)