Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30090
         (801 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   1.6  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   2.7  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   3.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   4.8  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    24   4.8  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   6.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.3  

>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 442 REQSMLRKMVIHERLWTSKKILRKQLEKW-SWSQPEMRHKRTMVQR 308
           REQ +LR+M   +R    +++  +Q ++W    Q + R +R   Q+
Sbjct: 166 REQELLRRMESQQRQEQRQQLEDQQRQRWRQQQQKQQRQQRLPAQQ 211


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 4/85 (4%)
 Frame = -3

Query: 448 EHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRH--KRTMVQRRTNMLGQ*H-- 281
           + REQ   ++    ++    ++  R Q  +W   Q + +H  +    Q+R     Q H  
Sbjct: 230 QQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQQQQRVQQQNQQHQR 289

Query: 280 MSMLVQQHKDGRSSNGLSEDWSSTV 206
                QQ +  +      E W++ V
Sbjct: 290 QQQQQQQQRQQQQQQEQQELWTTVV 314


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 136 HQSSCVFGLFLLNSHRSR 189
           H  SC+FG FL N+ + R
Sbjct: 514 HSHSCLFGTFLCNTVKER 531


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 136 HQSSCVFGLFLLNSHRSR 189
           H  SC+FG FL N+ + R
Sbjct: 514 HSHSCLFGTFLCNTVKER 531


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 336  ISGCDQDHFSSCF 374
            ISG  +DH+SSC+
Sbjct: 3110 ISGITEDHYSSCY 3122


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +3

Query: 459 AHTPPTLHPQLRRTPRLRC*GDRSR---CSLRCTCGCSPRPSVLQYLLCHLTPVTTAP 623
           +H  PT    LR+       GD +    CS +     S   SVL Y+    T +T AP
Sbjct: 129 SHFQPTAVQDLRKWTSTEAIGDVTTGIACSAKIASHSSTNNSVLPYITESPTDLTDAP 186


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +3

Query: 459 AHTPPTLHPQLRRTPRLRC*GDRSR---CSLRCTCGCSPRPSVLQYLLCHLTPVTTAP 623
           +H  PT    LR+       GD +    CS +     S   SVL Y+    T +T AP
Sbjct: 130 SHFQPTAVQDLRKWTSTEAIGDVTTGIACSAKIASHSSTNNSVLPYITESPTDLTDAP 187


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 354  DHFSSCFLSIFLLVHNRSWITIFRNILCSR 443
            DH    +L +F +   + WI I  + + SR
Sbjct: 1497 DHVGKAYLCLFQVATFKGWIQIMNDAIDSR 1526


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -3

Query: 142 TDGFSYHSRSRDSVAVSQGRQLRGDHQ-RGLAYSAQSN 32
           TDG ++    ++S++  Q  QL+  HQ + L   +Q N
Sbjct: 606 TDGSNHLMAGKESISQHQQSQLQHSHQAQSLDQQSQEN 643


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 731,450
Number of Sequences: 2352
Number of extensions: 14572
Number of successful extensions: 40
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84408009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)