Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30090
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC131801-1|AAI31802.1|  567|Homo sapiens protein phosphatase 1, ...    32   2.8  
AL121889-1|CAI19080.1|  567|Homo sapiens protein phosphatase 1, ...    32   2.8  
AL031657-1|CAI20058.1|  567|Homo sapiens protein phosphatase 1, ...    32   2.8  
AF362910-1|AAK52796.1|  567|Homo sapiens CAAX box protein TIMAP ...    32   2.8  
AB209564-1|BAD92801.1|  593|Homo sapiens ATP-binding cassette, s...    32   2.8  
AB020630-1|BAA74846.2|  578|Homo sapiens KIAA0823 protein protein.     32   2.8  

>BC131801-1|AAI31802.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 287
           E  +L K+   ERL  ++K   +QL+KW+  + +++H++   +R+ +  G+
Sbjct: 10  ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60


>AL121889-1|CAI19080.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 287
           E  +L K+   ERL  ++K   +QL+KW+  + +++H++   +R+ +  G+
Sbjct: 10  ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60


>AL031657-1|CAI20058.1|  567|Homo sapiens protein phosphatase 1,
           regulatory (inhibitor) subunit 16B protein.
          Length = 567

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 287
           E  +L K+   ERL  ++K   +QL+KW+  + +++H++   +R+ +  G+
Sbjct: 10  ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60


>AF362910-1|AAK52796.1|  567|Homo sapiens CAAX box protein TIMAP
           protein.
          Length = 567

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 287
           E  +L K+   ERL  ++K   +QL+KW+  + +++H++   +R+ +  G+
Sbjct: 10  ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60


>AB209564-1|BAD92801.1|  593|Homo sapiens ATP-binding cassette,
           sub-family F, member 1 variant protein.
          Length = 593

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = -3

Query: 448 EHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNM 296
           EHRE+  L+K + +ER   S K        +S SQ EM  ++ M++  +++
Sbjct: 2   EHREKKKLKKQMEYERQVASLKAANAAENDFSVSQAEMSSRQAMLENASDI 52


>AB020630-1|BAA74846.2|  578|Homo sapiens KIAA0823 protein protein.
          Length = 578

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/51 (27%), Positives = 31/51 (60%)
 Frame = -3

Query: 439 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 287
           E  +L K+   ERL  ++K   +QL+KW+  + +++H++   +R+ +  G+
Sbjct: 21  ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,563,624
Number of Sequences: 237096
Number of extensions: 2251872
Number of successful extensions: 5378
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5377
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)