Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30089
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.16 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.16 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.16 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       23   2.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   4.5  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   4.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.9  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/49 (26%), Positives = 26/49 (53%)
 Frame = +1

Query: 127 KDEGQDEHNIRKQEEVLQESLMMVPDCQRRLIKAYTDLKTTLEQNRTSK 273
           K +G+D+  + ++E VL  ++   PD ++ L +A   L+     N  S+
Sbjct: 77  KIDGEDDSGLTEEEVVLSNAIAEGPDAEKALQRAALILRLREGMNSLSR 125


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 302 LFSGNVFLVFFEVLFCSKVVLRSVYALINLL*QSGTIIRD 183
           L +  VFL+F+ + +C K + + +Y+LI+L    G  + D
Sbjct: 8   LTAAAVFLLFY-LFYCYKTIKQHIYSLISLSYLPGPPVND 46


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -3

Query: 302 LFSGNVFLVFFEVLFCSKVVLRSVYALINLL*QSGTIIRD 183
           L +  VFL+F+ + +C K + + +Y+LI+L    G  + D
Sbjct: 8   LTAAAVFLLFY-LFYCYKTIKQHIYSLISLSYLPGPPVND 46


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +2

Query: 488 KTNVTKNQQAQVSPQQGLHRRPRDQIRAPNYMPPQLPAYF 607
           K N +K Q +  SP  G       +IR   Y PP+LP  +
Sbjct: 110 KFNESKWQDSGESP--GFTTERNWEIREKPYTPPRLPTVY 147


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 454 HHRQPQHKSRHQNKCHQE 507
           HH Q QH   HQ   HQ+
Sbjct: 169 HHMQEQHPQHHQPH-HQQ 185


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 454 HHRQPQHKSRHQNKCHQE 507
           HH Q QH   HQ   HQ+
Sbjct: 171 HHMQEQHPQHHQPH-HQQ 187


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 42  DGRRETDCQGKSSLREGSRATEE 110
           +GRR  DC   SS+ +     E+
Sbjct: 23  EGRRVVDCDDVSSVSQSEAGDED 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,552
Number of Sequences: 336
Number of extensions: 2200
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)