Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30089
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.0  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   7.0  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    22   7.0  
AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin prot...    22   7.0  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    22   7.0  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   9.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   9.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.3  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 249 FRTEQDLKEHEEYITAEQVLKDAE 320
           FR   D+KE E  + A+ +LK A+
Sbjct: 509 FRVRSDVKESEFRLQADIILKRAD 532


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 329 KLGFSVLENLFSGNVFLVFFEV 264
           KL F  L+N    +  LVF+EV
Sbjct: 31  KLAFGFLDNSVWADGLLVFYEV 52


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 682 QKSRLKQLVEELLKGLRKKITR 747
           Q  R K+ +EE+L  ++KK TR
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTR 136


>AB073996-1|BAC76400.1|  215|Apis mellifera preprotachykinin
           protein.
          Length = 215

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 682 QKSRLKQLVEELLKGLRKKITR 747
           Q  R K+ +EE+L  ++KK TR
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTR 136


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +1

Query: 682 QKSRLKQLVEELLKGLRKKITR 747
           Q  R K+ +EE+L  ++KK TR
Sbjct: 115 QGMRGKKSLEEILDEIKKKTTR 136


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 305 NLFSGNVFLVFFEVLFCSKVVLRSVYALIN 216
           N     VF V F + +C+  +   +YAL +
Sbjct: 37  NCIHPTVFSVLFWLGYCNSAINPCIYALFS 66


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -3

Query: 305 NLFSGNVFLVFFEVLFCSKVVLRSVYALIN 216
           N     VF V F + +C+  +   +YAL +
Sbjct: 485 NCIHPTVFSVLFWLGYCNSAINPCIYALFS 514


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +1

Query: 166 EEVLQESLMMVPDCQRRLIKAYTDLKT 246
           + VL ++    PD  R L+K   DL+T
Sbjct: 371 QTVLAQNHPQHPDILRELLKKIPDLRT 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,218
Number of Sequences: 438
Number of extensions: 2514
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)