Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30088
(622 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E475B3 Cluster: PREDICTED: similar to MGC82305 p... 64 3e-09
UniRef50_Q6PEC1 Cluster: Tubulin-specific chaperone A; n=11; Tet... 62 1e-08
UniRef50_O75347 Cluster: Tubulin-specific chaperone A; n=18; Coe... 59 7e-08
UniRef50_A7S1Y3 Cluster: Predicted protein; n=1; Nematostella ve... 57 4e-07
UniRef50_O04350 Cluster: Tubulin-specific chaperone A; n=6; Magn... 53 5e-06
UniRef50_Q6K6A7 Cluster: Putative tubulin folding cofactor A; n=... 51 2e-05
UniRef50_A0CEW7 Cluster: Chromosome undetermined scaffold_173, w... 48 2e-04
UniRef50_Q4PF41 Cluster: Putative uncharacterized protein; n=1; ... 47 3e-04
UniRef50_Q5BT49 Cluster: SJCHGC02752 protein; n=1; Schistosoma j... 46 0.001
UniRef50_Q6C8G6 Cluster: Similar to sp|P48606 Saccharomyces cere... 38 0.15
UniRef50_Q54DE0 Cluster: Calmodulin-binding protein; n=2; Dictyo... 36 0.59
UniRef50_Q4S5R4 Cluster: Chromosome 9 SCAF14729, whole genome sh... 36 1.0
UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1; ... 36 1.0
UniRef50_Q4SEU8 Cluster: Chromosome undetermined SCAF14611, whol... 35 1.8
UniRef50_Q1LY84 Cluster: Novel protein; n=2; Danio rerio|Rep: No... 34 2.4
UniRef50_Q18BK7 Cluster: Putative membrane protein precursor; n=... 34 3.1
UniRef50_Q2Y0Q4 Cluster: ATRY; n=1; Macropus eugenii|Rep: ATRY -... 33 4.2
UniRef50_Q234Z2 Cluster: WW domain containing protein; n=1; Tetr... 33 4.2
UniRef50_Q06479 Cluster: F-box protein YLR352W; n=3; Saccharomyc... 33 4.2
UniRef50_Q9Y703 Cluster: Tubulin-specific chaperone A; n=1; Schi... 33 4.2
UniRef50_A7SR37 Cluster: Predicted protein; n=1; Nematostella ve... 33 5.5
UniRef50_Q6BKW3 Cluster: Similar to CA0436|CaRBL2 Candida albica... 33 5.5
UniRef50_Q9D5U9 Cluster: MICAL C-terminal-like protein; n=3; Mus... 33 5.5
UniRef50_UPI00006CB3D6 Cluster: cyclic nucleotide-binding domain... 33 7.3
UniRef50_Q1V881 Cluster: Site-specific recombinase, phage integr... 33 7.3
UniRef50_Q8I250 Cluster: Tubulin-specific chaperone a, putative;... 33 7.3
UniRef50_A5KBV7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q4G091 Cluster: MICAL C-terminal-like protein; n=3; Rat... 33 7.3
UniRef50_UPI000065D13D Cluster: Rab-interacting lysosomal protei... 32 9.6
UniRef50_Q2SLJ0 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
UniRef50_Q6VU49 Cluster: Ephrin; n=3; Endopterygota|Rep: Ephrin ... 32 9.6
UniRef50_Q22CE8 Cluster: Putative uncharacterized protein; n=1; ... 32 9.6
>UniRef50_UPI0000E475B3 Cluster: PREDICTED: similar to MGC82305
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to MGC82305 protein -
Strongylocentrotus purpuratus
Length = 86
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/56 (53%), Positives = 38/56 (67%)
Frame = +3
Query: 111 RIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNT 278
+++R K G+DE+ IRKQ EVL+E MMVPDC RR+ AY DLK L+Q K T
Sbjct: 12 KVERFKAGGKDEYEIRKQIEVLEESKMMVPDCTRRIKAAYGDLKNLLDQEEELKET 67
>UniRef50_Q6PEC1 Cluster: Tubulin-specific chaperone A; n=11;
Tetrapoda|Rep: Tubulin-specific chaperone A - Rattus
norvegicus (Rat)
Length = 108
Score = 62.1 bits (144), Expect = 1e-08
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNR 263
Q+ +I+++K E + + I+KQ E+LQE MM+PDCQRRL AYTDL+ LE +
Sbjct: 33 QEEKIEKMKAEDGENYAIKKQAEILQESRMMIPDCQRRLEAAYTDLRQILESEK 86
Score = 40.3 bits (90), Expect = 0.036
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 7 MADPRIRQIKIKTGVVKGLPRKK 75
MADPR+RQIKIKTGVVK L ++K
Sbjct: 1 MADPRVRQIKIKTGVVKRLVKEK 23
>UniRef50_O75347 Cluster: Tubulin-specific chaperone A; n=18;
Coelomata|Rep: Tubulin-specific chaperone A - Homo
sapiens (Human)
Length = 108
Score = 59.3 bits (137), Expect = 7e-08
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNR 263
Q+ +I++++ E + ++I+KQ E+LQE MM+PDCQRRL AY DL+ LE +
Sbjct: 33 QEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILENEK 86
Score = 40.3 bits (90), Expect = 0.036
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +1
Query: 7 MADPRIRQIKIKTGVVKGLPRKK 75
MADPR+RQIKIKTGVVK L ++K
Sbjct: 1 MADPRVRQIKIKTGVVKRLVKEK 23
>UniRef50_A7S1Y3 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 112
Score = 56.8 bits (131), Expect = 4e-07
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDL 239
Q +++ + E QDEH+I+KQ+EVL+E +M+PDC+RRL AY DL
Sbjct: 36 QGKKVENMIAENQDEHDIKKQKEVLEESRIMIPDCKRRLKTAYQDL 81
Score = 35.5 bits (78), Expect = 1.0
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1
Query: 13 DPRIRQIKIKTGVVKGLPRKK 75
DPR+RQ+KIKTG+VK L ++K
Sbjct: 6 DPRLRQLKIKTGIVKRLAKEK 26
>UniRef50_O04350 Cluster: Tubulin-specific chaperone A; n=6;
Magnoliophyta|Rep: Tubulin-specific chaperone A -
Arabidopsis thaliana (Mouse-ear cress)
Length = 113
Score = 53.2 bits (122), Expect = 5e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 51 CERIXXXXXXXXXXXXLQKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAY 230
C+RI + + +KD+G D +++++QE VL E MM+PDC +RL A
Sbjct: 14 CKRIVKELHSYEKEVEREAAKTADMKDKGADPYDLKQQENVLGESRMMIPDCHKRLESAL 73
Query: 231 TDLKTTLEQ 257
DLK+TL +
Sbjct: 74 ADLKSTLAE 82
>UniRef50_Q6K6A7 Cluster: Putative tubulin folding cofactor A; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
tubulin folding cofactor A - Oryza sativa subsp.
japonica (Rice)
Length = 90
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/67 (37%), Positives = 37/67 (55%)
Frame = +3
Query: 51 CERIXXXXXXXXXXXXLQKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAY 230
C+RI + + +K++G D +++++QE VL E MMVPDC +RL A
Sbjct: 14 CKRIVKELRSYEKEVEKEAAKTADMKEKGADPYDLKQQENVLAESRMMVPDCHKRLETAL 73
Query: 231 TDLKTTL 251
DLK TL
Sbjct: 74 ADLKATL 80
>UniRef50_A0CEW7 Cluster: Chromosome undetermined scaffold_173,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_173,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 120
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/51 (41%), Positives = 36/51 (70%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLE 254
Q RIQ++K++ +E +I+KQEEVLQE + M P+ RL+++ +L+ L+
Sbjct: 35 QNERIQKLKNQNAEEADIKKQEEVLQETVQMYPNIIGRLVESVNELQVWLD 85
>UniRef50_Q4PF41 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 176
Score = 47.2 bits (107), Expect = 3e-04
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKN-- 275
Q+ RI + D G+DE+++++Q VL + L M+PDC++RL A +L + TS +
Sbjct: 65 QETRIAQFIDAGRDEYDVKQQRSVLADTLKMIPDCRKRLQLATDELLNYVVSLPTSLHAL 124
Query: 276 -TRNTLPLNRFSRTLNPSFQPS 338
+ N L L+ F+ Q S
Sbjct: 125 KSHNRLLLDPFASNQQQGLQDS 146
>UniRef50_Q5BT49 Cluster: SJCHGC02752 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02752 protein - Schistosoma
japonicum (Blood fluke)
Length = 99
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 141 DEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNT 278
+EH+I+ + +L E MM+PDCQ RL KA +L+ LE+ K+T
Sbjct: 46 EEHDIKMAKAILDESKMMIPDCQSRLSKAIKELECALEECEEFKDT 91
>UniRef50_Q6C8G6 Cluster: Similar to sp|P48606 Saccharomyces
cerevisiae Tubulin-specific chaperone A; n=2;
Saccharomycetales|Rep: Similar to sp|P48606
Saccharomyces cerevisiae Tubulin-specific chaperone A -
Yarrowia lipolytica (Candida lipolytica)
Length = 106
Score = 38.3 bits (85), Expect = 0.15
Identities = 18/54 (33%), Positives = 34/54 (62%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNR 263
Q R++++K G+DE++I+KQ EVL++ MVP ++++ + L+ L R
Sbjct: 29 QAARVEKMKANGEDEYDIKKQIEVLKDTEQMVPVMRKKIDEMKASLEGILVSMR 82
>UniRef50_Q54DE0 Cluster: Calmodulin-binding protein; n=2;
Dictyostelium discoideum|Rep: Calmodulin-binding protein
- Dictyostelium discoideum AX4
Length = 1737
Score = 36.3 bits (80), Expect = 0.59
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 450 PPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGPRRIKIRA 581
PPPPP TQ I++ V ++S + + H+ P +G R K RA
Sbjct: 1165 PPPPPLKTQPVPISSGVENNSSPNLWSHRNSPNFNGLVREKSRA 1208
>UniRef50_Q4S5R4 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=3; Clupeocephala|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 915
Score = 35.5 bits (78), Expect = 1.0
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 384 KTKSCHNSSYYXLKNKYAFLNVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGPR 563
+ S H+S Y L + PP P T+ ++ ++++ + S H FRH+ G PR
Sbjct: 595 EVSSTHSSPYKTLPRPPREPHSMPPTPVMTRNAYSSSHLRSEGSPHCFRHRSGSLESQPR 654
>UniRef50_Q54P91 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1468
Score = 35.5 bits (78), Expect = 1.0
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNTR 281
+ N + EGQ+ I+KQ+++ + L V + + K+ LKT N T+ NT
Sbjct: 708 RSNSFHLLNTEGQNHLAIKKQQQMKHDQLQQVKNQEPP--KSPKSLKTVNNNNTTNNNTN 765
Query: 282 NTLP-LNRFSRTLNPSFQPSSHNYLLFIN***FTFKTKSCHNSSYYXLKNKYAFLNVPPP 458
T + + + P + + + + +N++Y K ++ PPP
Sbjct: 766 TTYSSIGNATNNILKKLDPLKKKIIENSS----SNNNNNNNNNNYSNSTKKSGEISAPPP 821
Query: 459 PP 464
PP
Sbjct: 822 PP 823
>UniRef50_Q4SEU8 Cluster: Chromosome undetermined SCAF14611, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14611, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1095
Score = 34.7 bits (76), Expect = 1.8
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +1
Query: 427 TNMRSLMSLHHRQPQHKSRSSRQMCTQIQASTSFATSKDLPSTGHGGS 570
T M S S +H QP +S+S +CT QAS S + S PS S
Sbjct: 720 TAMNSNTSHNHHQPHFQSQSQTHICTSGQASPSPSPSSSSPSPSSSSS 767
>UniRef50_Q1LY84 Cluster: Novel protein; n=2; Danio rerio|Rep: Novel
protein - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 269
Score = 34.3 bits (75), Expect = 2.4
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 420 LKNKYAFLNVPPPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTI-DGPRRIKIRAPNL 590
+ K ++ PPPP + T P + K HQ GPT+ G + KI AP +
Sbjct: 132 INGKMCYVQRPPPPTPNPTHQPQTAAPQPVPQRSKNSHQVGPTVKQGQAKEKISAPKM 189
>UniRef50_Q18BK7 Cluster: Putative membrane protein precursor; n=2;
Clostridium difficile|Rep: Putative membrane protein
precursor - Clostridium difficile (strain 630)
Length = 360
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +2
Query: 188 DDGSRLSKEINQSIYRSQNYFRTEQDLKEHEEY----ITAEQVLKDAE 319
D L+K+IN+ Y + Y R E+ +KE +EY I E + KD E
Sbjct: 301 DINEDLNKDINEDSYNNDYYNREEESIKETDEYNDDSINFEAIYKDLE 348
>UniRef50_Q2Y0Q4 Cluster: ATRY; n=1; Macropus eugenii|Rep: ATRY -
Macropus eugenii (Tammar wallaby)
Length = 1771
Score = 33.5 bits (73), Expect = 4.2
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +3
Query: 117 QRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTT 248
++I+DE Q E +I EVL+E + ++P L+K TDL+TT
Sbjct: 501 EKIEDEYQQETSITGNTEVLKENI-IIPGNDTTLLKEETDLQTT 543
>UniRef50_Q234Z2 Cluster: WW domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: WW domain containing
protein - Tetrahymena thermophila SB210
Length = 1297
Score = 33.5 bits (73), Expect = 4.2
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Frame = +3
Query: 108 NRIQRIKDEGQDE-HNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNTRN 284
NR+ D+ D+ H+ QE+ Q+Y+ + + ++ KA D + LE N + +N
Sbjct: 886 NRVIFPDDDSDDDFHDSFTQEQQRQKYIGDSENIRNQINKAPHDREENLE-NDNEEFYQN 944
Query: 285 TLPLNRFSRTLNPSFQPSSHNYLLFIN 365
+PL R + S SHN + I+
Sbjct: 945 NMPLQRQDLSYRRSSNGQSHNQQIMIH 971
>UniRef50_Q06479 Cluster: F-box protein YLR352W; n=3;
Saccharomycetaceae|Rep: F-box protein YLR352W -
Saccharomyces cerevisiae (Baker's yeast)
Length = 807
Score = 33.5 bits (73), Expect = 4.2
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 99 LQKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNT 278
LQ+ RIQ + DE Q+ I EE EYL PD QRR + + L ++ S++
Sbjct: 674 LQEQRIQELADEQQELRTIANFEETDDEYL-HDPDLQRRRSQLH------LFESSRSRSG 726
Query: 279 RNTLPLNRFSRTLNPSFQPSSH-NYL 353
T P + + SF SH N+L
Sbjct: 727 NKTRPSLTGEHSSSASFLSFSHFNHL 752
>UniRef50_Q9Y703 Cluster: Tubulin-specific chaperone A; n=1;
Schizosaccharomyces pombe|Rep: Tubulin-specific
chaperone A - Schizosaccharomyces pombe (Fission yeast)
Length = 119
Score = 33.5 bits (73), Expect = 4.2
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 105 KNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKT 245
+ R+Q D G+D I Q+ VL+++L +PD RL A DL++
Sbjct: 33 EKRVQSKIDNGEDSAEIEHQKFVLKKHLEALPDALVRLRNATNDLES 79
>UniRef50_A7SR37 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 145
Score = 33.1 bits (72), Expect = 5.5
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 453 PPPPTSTQKSFITTNVHPDTSKHKFRHQQGPTIDGPRRIKIRAPNLLW 596
PP P ST+K + +P +K H+ PT+ PRR P W
Sbjct: 16 PPNPVSTKKGVVQNPPNPVPTKKGVVHKTHPTLYRPRRALYTNPTKPW 63
>UniRef50_Q6BKW3 Cluster: Similar to CA0436|CaRBL2 Candida albicans
CaRBL2 Beta-tubulin binding protein; n=1; Debaryomyces
hansenii|Rep: Similar to CA0436|CaRBL2 Candida albicans
CaRBL2 Beta-tubulin binding protein - Debaryomyces
hansenii (Yeast) (Torulaspora hansenii)
Length = 99
Score = 33.1 bits (72), Expect = 5.5
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIK 224
Q++ + ++K DE+ ++KQ +VL+E MVP+ ++ K
Sbjct: 30 QQHFVNQMKSNNADEYELKKQIQVLEESQRMVPEVSEKIKK 70
>UniRef50_Q9D5U9 Cluster: MICAL C-terminal-like protein; n=3; Mus
musculus|Rep: MICAL C-terminal-like protein - Mus
musculus (Mouse)
Length = 520
Score = 33.1 bits (72), Expect = 5.5
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNTR 281
QK R + +KDEGQ + N K+E+ + E +M V + + +L+ +LE+ R + T+
Sbjct: 450 QKLRQKMLKDEGQKDENDLKEEQEIFEEMMQVIEQRNKLV-------DSLEEQRVKERTQ 502
Query: 282 N 284
+
Sbjct: 503 D 503
>UniRef50_UPI00006CB3D6 Cluster: cyclic nucleotide-binding domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: cyclic nucleotide-binding domain containing
protein - Tetrahymena thermophila SB210
Length = 1295
Score = 32.7 bits (71), Expect = 7.3
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 173 SSGVPDDGSRLSKEINQSI-YRSQNYFRTEQDLKEHEEYITAEQVLKDAEPQLPAIE 340
+ GV D ++L K + Q++ Y+ ++ R +D++ +EY ++ KD E QLP ++
Sbjct: 5 TEGVDQDKNKLLKVVIQTLSYQKED--RNSEDIQILKEYFKNFKIFKDIENQLPQVQ 59
>UniRef50_Q1V881 Cluster: Site-specific recombinase, phage integrase
family domain protein; n=4; Vibrionaceae|Rep:
Site-specific recombinase, phage integrase family domain
protein - Vibrio alginolyticus 12G01
Length = 803
Score = 32.7 bits (71), Expect = 7.3
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 470 NTKVVHHDKCAPRYKQAQVSPPARTYHRRATEDQDSSS 583
N K+++H AP Y + ++ P R RA E+QD+S+
Sbjct: 273 NRKMLYHGINAPNYPELRLKEPNRDSEYRAVENQDTST 310
>UniRef50_Q8I250 Cluster: Tubulin-specific chaperone a, putative;
n=1; Plasmodium falciparum 3D7|Rep: Tubulin-specific
chaperone a, putative - Plasmodium falciparum (isolate
3D7)
Length = 166
Score = 32.7 bits (71), Expect = 7.3
Identities = 13/49 (26%), Positives = 30/49 (61%)
Frame = +3
Query: 105 KNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTL 251
++++ +KDE + E+ I++ +++L+E + +VP L K+ L T+
Sbjct: 36 RSKLNTLKDENKGENEIKRAKDILEETVKVVPHINSSLQKSLKKLYETV 84
>UniRef50_A5KBV7 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1535
Score = 32.7 bits (71), Expect = 7.3
Identities = 21/77 (27%), Positives = 35/77 (45%)
Frame = +3
Query: 117 QRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQNRTSKNTRNTLPL 296
Q++K+E ++Q E L V +CQR++ K ++KT L+ +TS+ R
Sbjct: 904 QKLKEEIASNEEGKRQNESLSN---QVDECQRKVQKQEEEIKTLLKVQQTSERERMD-EY 959
Query: 297 NRFSRTLNPSFQPSSHN 347
N L F+ N
Sbjct: 960 NHNEEALKQRFEEEKEN 976
>UniRef50_Q4G091 Cluster: MICAL C-terminal-like protein; n=3; Rattus
norvegicus|Rep: MICAL C-terminal-like protein - Rattus
norvegicus (Rat)
Length = 687
Score = 32.7 bits (71), Expect = 7.3
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLI 221
QK R + +KDEGQ + N K+E+ + E +M V + + +L+
Sbjct: 617 QKLRQKMLKDEGQKDENDLKEEQEIFEEMMQVIEQRNKLV 656
>UniRef50_UPI000065D13D Cluster: Rab-interacting lysosomal protein.;
n=1; Takifugu rubripes|Rep: Rab-interacting lysosomal
protein. - Takifugu rubripes
Length = 309
Score = 32.3 bits (70), Expect = 9.6
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 102 QKNRIQRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQ 257
QK R+ + ++G D+H IR++E +L+ L V D QR ++A TT+ +
Sbjct: 74 QKKRLAKEAEDGNDKHEIREREVMLK--LKEVVDRQRDDLRAKVQQITTISK 123
>UniRef50_Q2SLJ0 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 278
Score = 32.3 bits (70), Expect = 9.6
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +3
Query: 117 QRIKDEGQDEHNIRKQEEVLQEYLMMVPDCQRRLIKAYTDLKTTLEQN 260
+++ +G + +R+ E +L + MV DC I++++DLK T++ +
Sbjct: 173 EKMVRQGIMQRAVRRTEALLDNIMKMVLDCGAHSIQSFSDLKWTIQSS 220
>UniRef50_Q6VU49 Cluster: Ephrin; n=3; Endopterygota|Rep: Ephrin -
Manduca sexta (Tobacco hawkmoth) (Tobacco hornworm)
Length = 260
Score = 32.3 bits (70), Expect = 9.6
Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +3
Query: 450 PPPPPTSTQKSFITTNVHPDTSK-HKF 527
PPPPPT++ + TT V P T K HK+
Sbjct: 194 PPPPPTTSTTTTTTTTVKPVTKKTHKY 220
>UniRef50_Q22CE8 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1211
Score = 32.3 bits (70), Expect = 9.6
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 192 MVPDCQRRLIKAYTDLKT-TLEQNRTSKNTRNTLPLNRFSRTLNPSFQPSSHNYLLF 359
M CQ++L + Y KT T E ++ +K L N + + L +FQ ++YLL+
Sbjct: 325 MKRQCQKKLQEIYIKYKTATNELDKLTKCLNTFLEQNNYQQHLKTAFQQQPNDYLLW 381
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,146,395
Number of Sequences: 1657284
Number of extensions: 11099741
Number of successful extensions: 44263
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 40647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43852
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45221970467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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