Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30087
(823 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p pro... 287 2e-77
AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-P... 287 2e-77
AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-P... 287 2e-77
D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal prot... 281 8e-76
M97196-1|AAA28396.1| 510|Drosophila melanogaster DNA-binding pr... 30 4.4
BT028816-1|ABI34197.1| 482|Drosophila melanogaster RT01022p pro... 30 4.4
BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p pro... 30 4.4
BT016125-1|AAV37010.1| 500|Drosophila melanogaster GM16860p pro... 30 4.4
AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p pro... 30 4.4
AE014134-793|AAF50966.2| 510|Drosophila melanogaster CG11924-PA... 30 4.4
AE014134-792|AAO41153.1| 482|Drosophila melanogaster CG11924-PC... 30 4.4
AE014134-791|AAO41152.1| 482|Drosophila melanogaster CG11924-PB... 30 4.4
AE014134-790|AAO41151.1| 514|Drosophila melanogaster CG11924-PD... 30 4.4
AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA... 30 4.4
>BT011369-1|AAR96161.1| 261|Drosophila melanogaster RE57333p
protein.
Length = 261
Score = 287 bits (703), Expect = 2e-77
Identities = 132/172 (76%), Positives = 146/172 (84%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 7 KHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVM 66
Query: 181 QRLIKVDGKVRTEPTYPTGFMRCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QRL+KVDGKVRT+PTYP G+M +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 67 QRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFGLG 516
K+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF G
Sbjct: 127 KKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSG 178
Score = 93.5 bits (222), Expect = 3e-19
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3
Query: 510 SGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTSPRG*TTCS*IGKGTKGVH 689
SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH T IGKG K +
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK-PY 235
Query: 690 LRCRAGKGL 716
+ GKG+
Sbjct: 236 ISLPKGKGV 244
>AE014296-2240|AAF49846.1| 261|Drosophila melanogaster CG11276-PB,
isoform B protein.
Length = 261
Score = 287 bits (703), Expect = 2e-77
Identities = 132/172 (76%), Positives = 146/172 (84%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 7 KHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVM 66
Query: 181 QRLIKVDGKVRTEPTYPTGFMRCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QRL+KVDGKVRT+PTYP G+M +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 67 QRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFGLG 516
K+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF G
Sbjct: 127 KKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSG 178
Score = 93.5 bits (222), Expect = 3e-19
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3
Query: 510 SGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTSPRG*TTCS*IGKGTKGVH 689
SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH T IGKG K +
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK-PY 235
Query: 690 LRCRAGKGL 716
+ GKG+
Sbjct: 236 ISLPKGKGV 244
>AE014296-2239|AAF49847.1| 261|Drosophila melanogaster CG11276-PA,
isoform A protein.
Length = 261
Score = 287 bits (703), Expect = 2e-77
Identities = 132/172 (76%), Positives = 146/172 (84%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+IFLRNRLKYAL G EV KIV
Sbjct: 7 KHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLIFLRNRLKYALNGAEVTKIVM 66
Query: 181 QRLIKVDGKVRTEPTYPTGFMRCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QRL+KVDGKVRT+PTYP G+M +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 67 QRLVKVDGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFGLG 516
K+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF G
Sbjct: 127 KKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSG 178
Score = 93.5 bits (222), Expect = 3e-19
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3
Query: 510 SGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTSPRG*TTCS*IGKGTKGVH 689
SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH T IGKG K +
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK-PY 235
Query: 690 LRCRAGKGL 716
+ GKG+
Sbjct: 236 ISLPKGKGV 244
>D16257-1|BAA03786.1| 261|Drosophila melanogaster ribosomal protein
S4 protein.
Length = 261
Score = 281 bits (689), Expect = 8e-76
Identities = 130/172 (75%), Positives = 144/172 (83%)
Frame = +1
Query: 1 KHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVK 180
KHLKRL APKAWMLDKLGGV+APRPSTGPHKLRE LPL+ FLRNRLKYAL G EV KIV
Sbjct: 7 KHLKRLAAPKAWMLDKLGGVFAPRPSTGPHKLRESLPLLTFLRNRLKYALNGAEVTKIVM 66
Query: 181 QRLIKVDGKVRTEPTYPTGFMRCCLIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKV 360
QRL+KV GKVRT+PTYP G+M +EKT E FRL+YDVKGRF IHRI+ EEAKYKLCKV
Sbjct: 67 QRLVKVYGKVRTDPTYPAGYMDVITLEKTGEFFRLVYDVKGRFVIHRISAEEAKYKLCKV 126
Query: 361 KRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMDFIKFGLG 516
K+ G K VP+LVTHDGRTIRYPDPLI NDS+Q+DIA+ KI D+IKF G
Sbjct: 127 KKTQLGAKGVPFLVTHDGRTIRYPDPLIHANDSVQVDIASGKITDYIKFDSG 178
Score = 93.5 bits (222), Expect = 3e-19
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3
Query: 510 SGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHIKDSTGHTSPRG*TTCS*IGKGTKGVH 689
SGNLCMITGGRNLGRVGT+V+RERHPGSFDIVHIKDS GH T IGKG K +
Sbjct: 177 SGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHVFATRLTNVFIIGKGNK-PY 235
Query: 690 LRCRAGKGL 716
+ GKG+
Sbjct: 236 ISLPKGKGV 244
>M97196-1|AAA28396.1| 510|Drosophila melanogaster DNA-binding
protein isoform I protein.
Length = 510
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>BT028816-1|ABI34197.1| 482|Drosophila melanogaster RT01022p
protein.
Length = 482
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>BT021421-1|AAX33569.1| 1098|Drosophila melanogaster LD02690p
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 18 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 194
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
>BT016125-1|AAV37010.1| 500|Drosophila melanogaster GM16860p
protein.
Length = 500
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>AY051840-1|AAK93264.1| 561|Drosophila melanogaster LD34444p
protein.
Length = 561
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 18 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 194
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 18 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 74
>AE014134-793|AAF50966.2| 510|Drosophila melanogaster CG11924-PA,
isoform A protein.
Length = 510
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>AE014134-792|AAO41153.1| 482|Drosophila melanogaster CG11924-PC,
isoform C protein.
Length = 482
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>AE014134-791|AAO41152.1| 482|Drosophila melanogaster CG11924-PB,
isoform B protein.
Length = 482
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>AE014134-790|AAO41151.1| 514|Drosophila melanogaster CG11924-PD,
isoform D protein.
Length = 514
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 560 HHRVPRETSRLLRHCAHQGLHGTHFATRLNNVFINRQ-GHEGRTSSLPRGQR 712
HHR+ +T L C ++G H AT+ N + Q G T+ L GQ+
Sbjct: 143 HHRLAHQTPAFLSRCLMCSIYGIHSATQQPNEYKCTQCGSICTTAMLAAGQQ 194
>AE013599-2039|AAF58149.3| 1098|Drosophila melanogaster CG8155-PA
protein.
Length = 1098
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +3
Query: 18 KRSQSMDVGQTWRCVCTETVNRSPQVARVLAPGDFPEESSEVCFDRKRSPENCETTPHK 194
K QS+D + + NR+ ++ + L+ G+ E+ FDRK SP ET P K
Sbjct: 555 KVHQSLDESKMLALIEGALDNRNVKLEQNLSAGEETEDDD--VFDRKESPSFLETNPFK 611
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,217,098
Number of Sequences: 53049
Number of extensions: 1047651
Number of successful extensions: 3085
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3078
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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