Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30086
         (825 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    26   1.2  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    26   1.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    26   1.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    24   6.5  

>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 550 NNYKKLYKKETFKCK*VDVGNFRNCPQFI 636
           NN  + Y  ETF+C   + GN   CPQ++
Sbjct: 122 NNCCQAY--ETFQCYFREFGNLVTCPQYV 148


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 577 ETFKCK*VDVGNFRNCPQFI 636
           ETF+C   + GN   CPQ++
Sbjct: 129 ETFQCYFQEFGNLVTCPQYV 148


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 550 NNYKKLYKKETFKCK*VDVGNFRNCPQFI 636
           NN  + Y  ETF+C   + GN   CPQ++
Sbjct: 122 NNCCQAY--ETFQCYFREFGNLVTCPQYV 148


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 4/48 (8%)
 Frame = +2

Query: 284 CLVKT-TIPPSPECGCGAERSSCSRCRLIGRWT---TSPTTGRNWILR 415
           C+ K    PP+P      ER  C RC  +G W     SP   +N  +R
Sbjct: 645 CVSKVRAAPPTPR-----ERVRCYRCLELGHWAHDCRSPDDRQNMCIR 687


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 953,136
Number of Sequences: 2352
Number of extensions: 20557
Number of successful extensions: 41
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)