Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30086
(825 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 180 2e-45
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 180 2e-45
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 180 2e-45
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 180 2e-45
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 180 2e-45
AE014297-3586|AAF56320.2| 623|Drosophila melanogaster CG6677-PA... 30 3.3
AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA... 29 5.8
AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA... 29 5.8
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 29 7.7
AY058376-1|AAL13605.1| 499|Drosophila melanogaster GH14326p pro... 29 7.7
AE013599-3349|AAF46811.1| 499|Drosophila melanogaster CG3045-PA... 29 7.7
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 29 7.7
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 180 bits (439), Expect = 2e-45
Identities = 92/151 (60%), Positives = 106/151 (70%)
Frame = +1
Query: 55 FKAVFLLPTESRSLNSNPLLLGRKFCPRRNYSHLGMPEYQITPEETRLKVFMSCNLYYGY 234
FK V+ E++S+ P KF NYS + EY+ E + KVFMSCNL G
Sbjct: 318 FKRVYSNEDEAKSI---PYFFD-KF-DAENYS-IWFGEYKYNEELS--KVFMSCNLITGM 369
Query: 235 VPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPS 414
+ + RK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE YDWKKLD
Sbjct: 370 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 429
Query: 415 SEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
SEETKKLV YFSW+GTDKDGRKFNQGKIFK
Sbjct: 430 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 460
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 180 bits (439), Expect = 2e-45
Identities = 92/151 (60%), Positives = 106/151 (70%)
Frame = +1
Query: 55 FKAVFLLPTESRSLNSNPLLLGRKFCPRRNYSHLGMPEYQITPEETRLKVFMSCNLYYGY 234
FK V+ E++S+ P KF NYS + EY+ E + KVFMSCNL G
Sbjct: 289 FKRVYSNEDEAKSI---PYFFD-KF-DAENYS-IWFGEYKYNEELS--KVFMSCNLITGM 340
Query: 235 VPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPS 414
+ + RK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE YDWKKLD
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400
Query: 415 SEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
SEETKKLV YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 180 bits (439), Expect = 2e-45
Identities = 92/151 (60%), Positives = 106/151 (70%)
Frame = +1
Query: 55 FKAVFLLPTESRSLNSNPLLLGRKFCPRRNYSHLGMPEYQITPEETRLKVFMSCNLYYGY 234
FK V+ E++S+ P KF NYS + EY+ E + KVFMSCNL G
Sbjct: 218 FKRVYSNEDEAKSI---PYFFD-KF-DAENYS-IWFGEYKYNEELS--KVFMSCNLITGM 269
Query: 235 VPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPS 414
+ + RK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE YDWKKLD
Sbjct: 270 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 329
Query: 415 SEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
SEETKKLV YFSW+GTDKDGRKFNQGKIFK
Sbjct: 330 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 360
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 180 bits (439), Expect = 2e-45
Identities = 92/151 (60%), Positives = 106/151 (70%)
Frame = +1
Query: 55 FKAVFLLPTESRSLNSNPLLLGRKFCPRRNYSHLGMPEYQITPEETRLKVFMSCNLYYGY 234
FK V+ E++S+ P KF NYS + EY+ E + KVFMSCNL G
Sbjct: 289 FKRVYSNEDEAKSI---PYFFD-KF-DAENYS-IWFGEYKYNEELS--KVFMSCNLITGM 340
Query: 235 VPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPS 414
+ + RK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE YDWKKLD
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400
Query: 415 SEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
SEETKKLV YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 180 bits (439), Expect = 2e-45
Identities = 92/151 (60%), Positives = 106/151 (70%)
Frame = +1
Query: 55 FKAVFLLPTESRSLNSNPLLLGRKFCPRRNYSHLGMPEYQITPEETRLKVFMSCNLYYGY 234
FK V+ E++S+ P KF NYS + EY+ E + KVFMSCNL G
Sbjct: 289 FKRVYSNEDEAKSI---PYFFD-KF-DAENYS-IWFGEYKYNEELS--KVFMSCNLITGM 340
Query: 235 VPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYESYDWKKLDPS 414
+ + RK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE YDWKKLD
Sbjct: 341 FQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEVYDWKKLDAK 400
Query: 415 SEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
SEETKKLV YFSW+GTDKDGRKFNQGKIFK
Sbjct: 401 SEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
>AE014297-3586|AAF56320.2| 623|Drosophila melanogaster CG6677-PA,
isoform A protein.
Length = 623
Score = 30.3 bits (65), Expect = 3.3
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +2
Query: 323 GCGAERSSCSRCRLIGRWTTSPTTGRNWILRAR----RPRNLSRTTSRGTEPTKTVESST 490
GC A S C R I W S R L A +P N R S+ + + ESS+
Sbjct: 25 GCQAVCSKCCRLSFIALWRRSGICKRTMCLPANGHSGQPPNFLRADSQ-MDTSSPTESSS 83
Query: 491 RARYSSNADK 520
+++ DK
Sbjct: 84 EVNFTAEEDK 93
>AE014298-1753|AAF48147.2| 1860|Drosophila melanogaster CG2750-PA
protein.
Length = 1860
Score = 29.5 bits (63), Expect = 5.8
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +2
Query: 212 AVTFITGMFQRLDKSANRLSHPSACLVKTTIPPSPEC 322
A +F +F+ + RLS P C T PP+ EC
Sbjct: 669 APSFDQSVFRGSSRRQGRLSSPKPCASSTRCPPTNEC 705
>AE014296-1693|AAF50239.2| 1937|Drosophila melanogaster CG3280-PA
protein.
Length = 1937
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/58 (37%), Positives = 27/58 (46%)
Frame = +2
Query: 359 RLIGRWTTSPTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKRPAN 532
RL GR TT+ +T RRPR RTT+ TE T T E + SS P +
Sbjct: 966 RLRGRITTTTSTSTT-STTTRRPRWRYRTTT--TELTSTTEEESSTTESSTDSSSPGS 1020
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = +2
Query: 371 RWTTSPTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKRPANVYTFHT 550
R TT+ TT + + TTS +PT T ++ ++ S+ + + T
Sbjct: 427 RPTTTTTTTKATTTKRTTTTKKPTTTSTTPKPTTTTSTTPKSTTSTTSTTSTTSTTPTTT 486
Query: 551 ITIKNFTKKK 580
TI FT KK
Sbjct: 487 TTINVFTTKK 496
>AY058376-1|AAL13605.1| 499|Drosophila melanogaster GH14326p
protein.
Length = 499
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 405 QFLPVVGLVVHLPIRRQREHELLSAPHPHSGDGGIVVFTKQADGCESLFA 256
Q+ P +GL ++L R+H S HP SGD AD L A
Sbjct: 340 QYTPAIGLPLNLFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNA 389
>AE013599-3349|AAF46811.1| 499|Drosophila melanogaster CG3045-PA
protein.
Length = 499
Score = 29.1 bits (62), Expect = 7.7
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 405 QFLPVVGLVVHLPIRRQREHELLSAPHPHSGDGGIVVFTKQADGCESLFA 256
Q+ P +GL ++L R+H S HP SGD AD L A
Sbjct: 340 QYTPAIGLPLNLFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNA 389
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 269 SHPSAC-LVKTTIPPSPECGC--GAERSSCSRCRLIGRWTTSPTT 394
S P C V P S EC C G ++ +RCR I T PTT
Sbjct: 203 SEPGTCDQVCRNTPGSYECSCVSGYAKTKGNRCRAINVPPTEPTT 247
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,651,457
Number of Sequences: 53049
Number of extensions: 964498
Number of successful extensions: 3056
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3049
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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