Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30086
(825 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 142 2e-34
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 142 2e-34
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 31 1.3
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 31 1.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.7
Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical pr... 30 2.3
U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical pr... 29 4.0
U80954-4|AAB38097.2| 426|Caenorhabditis elegans Hypothetical pr... 29 5.3
AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core alpha-6-... 29 5.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 5.3
AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl trans... 29 5.3
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 28 7.1
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 28 7.1
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 28 7.1
AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical... 28 7.1
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 28 7.1
Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical pr... 28 9.3
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 9.3
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 142 bits (345), Expect = 2e-34
Identities = 68/114 (59%), Positives = 80/114 (70%)
Frame = +1
Query: 166 EYQITPEETRLKVFMSCNLYYGYVPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKEL 345
EY+ PE+ L FMSCNL G + + +K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 255 EYKY-PEDLTL-AFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKL 312
Query: 346 VFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
F LS DWQVDYESY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 313 AFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 142 bits (345), Expect = 2e-34
Identities = 68/114 (59%), Positives = 80/114 (70%)
Frame = +1
Query: 166 EYQITPEETRLKVFMSCNLYYGYVPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKEL 345
EY+ PE+ L FMSCNL G + + +K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 263 EYKY-PEDLTL-AFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKL 320
Query: 346 VFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
F LS DWQVDYESY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 321 AFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 142 bits (345), Expect = 2e-34
Identities = 68/114 (59%), Positives = 80/114 (70%)
Frame = +1
Query: 166 EYQITPEETRLKVFMSCNLYYGYVPEVRQKRKQAFASVCLFGEDNNSTISGVWVWRGKEL 345
EY+ PE+ L FMSCNL G + + +K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 288 EYKY-PEDLTL-AFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKL 345
Query: 346 VFPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 507
F LS DWQVDYESY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 346 AFELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 506 SNADKRPANVYTFHTITIKNFTKKKHSNVNRW 601
SN D + +Y F+T N K +++V RW
Sbjct: 533 SNGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 506 SNADKRPANVYTFHTITIKNFTKKKHSNVNRW 601
SN D + +Y F+T N K +++V RW
Sbjct: 533 SNGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.7
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +1
Query: 352 PLSSDWQVDYESYDWKKL 405
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>Z71262-7|CAA95811.2| 368|Caenorhabditis elegans Hypothetical
protein F22D6.9 protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -2
Query: 107 GLEFRLRLSVGSKNTALKIHPWLEREPFR 21
G+EF R+ G+ + K+H WLE FR
Sbjct: 3 GIEFEARMKPGTPDDLKKLHSWLESIIFR 31
>U39645-2|AAA80365.2| 638|Caenorhabditis elegans Hypothetical
protein C14F11.2 protein.
Length = 638
Score = 29.1 bits (62), Expect = 4.0
Identities = 21/62 (33%), Positives = 27/62 (43%)
Frame = +2
Query: 371 RWTTSPTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKRPANVYTFHT 550
R TT+ TT + P N SR T EP K V+ R + N + RP + T
Sbjct: 290 RTTTASTT---IVAEKHPPHNESRATRNPPEPVKHVQHDHRP-VNGNLNHRPKELVESRT 345
Query: 551 IT 556
IT
Sbjct: 346 IT 347
>U80954-4|AAB38097.2| 426|Caenorhabditis elegans Hypothetical
protein T07F8.2 protein.
Length = 426
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 365 IGRWTTSPTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKR---PANV 535
I W TS +WI A R+L TE K S A S+N R P ++
Sbjct: 304 IATWLTSMNAAGDWIFYAVMNRDLRNLIRFATERRKRSTMSHAASPSTNRSLRQQVPPSM 363
Query: 536 YTFHTITIKN 565
H+I+ ++
Sbjct: 364 KVLHSISYRS 373
>AJ512486-1|CAD54736.1| 559|Caenorhabditis elegans core
alpha-6-fucosyltransferase protein.
Length = 559
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 227 TGMFQRLDKSANRLSHPSACLVKTTIPPS--PECGCGAERSSCSRCRL 364
T + QR+ KS +L +P AC T+ + ECG G + + C +
Sbjct: 169 TAITQRIFKSIEKLQNPKACSEAKTLVCNLDKECGFGCQLHHVTYCAI 216
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 5.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 320 CGCGAERSSCSRCRLIGRWTTSPTTG 397
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>AF022968-8|AAN84870.1| 559|Caenorhabditis elegans Fucosyl
transferase protein 8 protein.
Length = 559
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 227 TGMFQRLDKSANRLSHPSACLVKTTIPPS--PECGCGAERSSCSRCRL 364
T + QR+ KS +L +P AC T+ + ECG G + + C +
Sbjct: 169 TAITQRIFKSIEKLQNPKACSEAKTLVCNLDKECGFGCQLHHVTYCAI 216
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 248 DKSANRLSHPSACLVKTTIPPSPEC 322
D+S++ L HP V+T P PEC
Sbjct: 212 DESSDTLKHPGKNCVRTVQPDPPEC 236
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 248 DKSANRLSHPSACLVKTTIPPSPEC 322
D+S++ L HP V+T P PEC
Sbjct: 796 DESSDTLKHPGKNCVRTVQPDPPEC 820
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 248 DKSANRLSHPSACLVKTTIPPSPEC 322
D+S++ L HP V+T P PEC
Sbjct: 212 DESSDTLKHPGKNCVRTVQPDPPEC 236
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 248 DKSANRLSHPSACLVKTTIPPSPEC 322
D+S++ L HP V+T P PEC
Sbjct: 796 DESSDTLKHPGKNCVRTVQPDPPEC 820
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 248 DKSANRLSHPSACLVKTTIPPSPEC 322
D+S++ L HP V+T P PEC
Sbjct: 796 DESSDTLKHPGKNCVRTVQPDPPEC 820
>AC024817-40|AAF59577.4| 967|Caenorhabditis elegans Hypothetical
protein Y54G2A.21 protein.
Length = 967
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/60 (20%), Positives = 26/60 (43%)
Frame = +2
Query: 416 ARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKRPANVYTFHTITIKNFTKKKHSNVN 595
A+ RN+ R T +G E + ++ R+ + DK+ ++ + +N N +
Sbjct: 780 AKDVRNIGRITEQGVESVHAIFNALERRFCNYRDKKRRYIHVLRELMCRNIMNDMTMNTS 839
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/60 (20%), Positives = 26/60 (43%)
Frame = +2
Query: 416 ARRPRNLSRTTSRGTEPTKTVESSTRARYSSNADKRPANVYTFHTITIKNFTKKKHSNVN 595
A+ RN+ R T +G E + ++ R+ + DK+ ++ + +N N +
Sbjct: 256 AKDVRNIGRITEQGVESVHAIFNALERRFCNYRDKKRRYIHVLRELMCRNIMNDMTMNTS 315
>Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical
protein C38C10.2 protein.
Length = 493
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 208 MSCNLYYGYVPEVRQKRKQAFASVCLFGEDNNSTISGV-WVWR-GKELVFPLSSDWQVDY 381
+S +++G + + +FA VC+ E N T +GV V R GKE+ P+ S+ V
Sbjct: 18 LSLVMFFGCLVTYMMRTNMSFAVVCMVNE--NKTDTGVEKVSRCGKEMT-PVESNSSVIG 74
Query: 382 ESYDWKK 402
E +DW K
Sbjct: 75 E-FDWDK 80
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 284 CLVKTTIPPSPECGCGAERSS 346
C + PP P+CGCG ++ S
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,967,274
Number of Sequences: 27780
Number of extensions: 495925
Number of successful extensions: 1546
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1541
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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