Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30085
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117...    30   2.7  
12_01_0584 - 4762476-4762613,4763986-4764075,4765048-4765146,476...    29   6.2  
05_05_0201 + 23206859-23206998,23207858-23207936,23208121-232082...    29   6.2  
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748...    28   8.2  
06_03_0215 - 18080286-18080914,18080925-18080997                       28   8.2  

>10_01_0097 -
           1171949-1172047,1172520-1172591,1172791-1172949,
           1172998-1173381,1173478-1175253,1175329-1175452,
           1176859-1177027,1177131-1177226,1177339-1177527,
           1177965-1179303
          Length = 1468

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +1

Query: 661 STES*ETRIMEAFQK-IQNGPGKLQGTTRLEQLGNDLGRKGDLTN 792
           + E  +T +M+  +  +  GP  L+ T  LE  GN LG   DL+N
Sbjct: 182 AAEPSDTEMMDVPKDPVVRGPTGLESTKNLENKGNQLGDDSDLSN 226


>12_01_0584 -
           4762476-4762613,4763986-4764075,4765048-4765146,
           4766032-4766154,4766243-4766405,4767307-4767356,
           4767826-4767942,4769477-4769683,4769763-4769900,
           4771212-4771274,4771358-4771441,4771933-4772084,
           4772219-4772357,4772814-4772924
          Length = 557

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +2

Query: 581 PRDETAHYHPHAAFDENSSNISTSRIKVQRVERQE*WKLSKRSRMDQG 724
           P ++   Y  HA F +  S  + S +++ R ER+E  +  KR + D G
Sbjct: 9   PEEDDQSYEEHADFSQ--SEHAESAVEIMRREREERRRKLKREQHDDG 54


>05_05_0201 +
           23206859-23206998,23207858-23207936,23208121-23208219,
           23208561-23208674,23208762-23208910,23209010-23209091,
           23209170-23209255,23209520-23209750,23209830-23210727
          Length = 625

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 349 PVTPKSESQLESDNEDRRTHLSKRKHLDSDDSDETYTPFAEQ 474
           P+ P S   +E D +D    +++RK+     SDE  +   +Q
Sbjct: 304 PIAPPSAPPVEEDEDDEFAQIARRKNKSVISSDEASSSAGDQ 345


>08_02_0259 -
           14974526-14974572,14974670-14974742,14974829-14974891,
           14975030-14975097,14975172-14975295,14976434-14976493,
           14976744-14976806,14976902-14977942,14978027-14978093,
           14978188-14978303,14978454-14978540,14978749-14978838,
           14979128-14979214,14979366-14979428,14979509-14979566,
           14980174-14980231,14980349-14980416,14980508-14980587,
           14981084-14981147,14981321-14981392,14981517-14981576,
           14982344-14982398,14982487-14982520,14983845-14983931,
           14984036-14984122,14984211-14984408,14984509-14984639,
           14984739-14984838
          Length = 1066

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = +1

Query: 304 SVVNIISPCKNNDYEPVTPKSESQLESDNEDRRTHLSKRKHLDSDDSDETYTPFAEQTSR 483
           S   +++  ++ND E +T  S     S +   R H  ++     D +D+  T   + + R
Sbjct: 94  STYKLLADEEDNDAETITSTSRQSSASTSSKSRKHFRRKAEDQDDGNDDDETKIKQDSGR 153


>06_03_0215 - 18080286-18080914,18080925-18080997
          Length = 233

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 504 QISNQRNDPCT*GIATGWDQKKRPTPQETRQHTI 605
           Q+   R  P   G A  WD ++RP P    + T+
Sbjct: 176 QVGPGRQPPAPAGAADAWDPRRRPPPAACTRSTV 209


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,487,784
Number of Sequences: 37544
Number of extensions: 439238
Number of successful extensions: 1379
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)