Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30084
(711 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 192 3e-49
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 192 3e-49
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 191 5e-49
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 189 2e-48
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 138 5e-33
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 134 7e-32
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 97 2e-20
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 97 2e-20
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 96 3e-20
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 9e-20
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 94 1e-19
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 93 2e-19
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 92 4e-19
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 87 1e-17
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 2e-17
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 84 1e-16
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 79 5e-15
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 67 1e-11
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 4e-09
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 54 1e-07
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 53 3e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 50 2e-06
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 40 0.003
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.008
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 29 2.8
SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2) 29 2.8
SB_50693| Best HMM Match : C2 (HMM E-Value=0) 29 4.9
SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18) 28 6.5
SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 192 bits (467), Expect = 3e-49
Identities = 97/136 (71%), Positives = 102/136 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
ESCDCLQGFQL + P +SVVPSPKVSDTVVEPYN
Sbjct: 125 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDET 662
AT LS ++NTDET
Sbjct: 185 AT-LSVHQLVENTDET 199
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 192 bits (467), Expect = 3e-49
Identities = 97/136 (71%), Positives = 102/136 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 278 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 337
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
ESCDCLQGFQL + P +SVVPSPKVSDTVVEPYN
Sbjct: 338 ESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 397
Query: 615 ATSLSSPA*LKNTDET 662
AT LS ++NTDET
Sbjct: 398 AT-LSVHQLVENTDET 412
Score = 142 bits (344), Expect = 3e-34
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGG 234
L+KMREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GG
Sbjct: 211 LFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGG 270
Query: 235 KYVPRAI 255
KYVPRA+
Sbjct: 271 KYVPRAV 277
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 191 bits (465), Expect = 5e-49
Identities = 96/136 (70%), Positives = 102/136 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKE+
Sbjct: 10 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEA 69
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
ESCDC+QGFQL + P +SVVPSPKVSDTVVEPYN
Sbjct: 70 ESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREEYPDRIMNTFSVVPSPKVSDTVVEPYN 129
Query: 615 ATSLSSPA*LKNTDET 662
AT LS ++NTDET
Sbjct: 130 AT-LSVHQLVENTDET 144
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 189 bits (460), Expect = 2e-48
Identities = 93/136 (68%), Positives = 102/136 (75%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
L+DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVVRKE+
Sbjct: 65 LIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSVLDVVRKEA 124
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
ESCDC+QGFQL + P +S+VPSPKVSDTVVEPYN
Sbjct: 125 ESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSIVPSPKVSDTVVEPYN 184
Query: 615 ATSLSSPA*LKNTDET 662
AT LS ++NTDET
Sbjct: 185 AT-LSVHQLVENTDET 199
Score = 134 bits (325), Expect = 5e-32
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIV LQAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PR++
Sbjct: 61 PRSV 64
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 138 bits (333), Expect = 5e-33
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 243
MREIVH QAGQCGNQIGAKFWE+ISDEHGIDPTG YHGDSDLQLERINVYYNEA+GGKYV
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV 60
Query: 244 PRAI 255
PRAI
Sbjct: 61 PRAI 64
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 338
LVDLEPGTMDSVRSGPFGQIFRPDNFVF
Sbjct: 65 LVDLEPGTMDSVRSGPFGQIFRPDNFVF 92
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 134 bits (324), Expect = 7e-32
Identities = 62/111 (55%), Positives = 75/111 (67%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEPGTMD+VR GP G +FRPDNFV QSGA NNWAKGHY+EGAEL+D++ DV+RKE+
Sbjct: 21 LVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNIFDVLRKEA 80
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKV 587
E+CDC+QG QL + P + +SVVPSPKV
Sbjct: 81 ENCDCMQGVQLIQALGGGTGSGLGTLILSKIREEYPDRILSAFSVVPSPKV 131
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 96.7 bits (230), Expect = 2e-20
Identities = 50/133 (37%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ V G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P+VS VVEPYN+
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 187
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 188 I-LTTHTTLEHSD 199
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/133 (36%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 501 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIVDLVLDRIRKLAD 560
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P+VS VVEPYN+
Sbjct: 561 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 620
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 621 I-LTTHTTLEHSD 632
Score = 56.0 bits (129), Expect = 3e-08
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 432 YEERECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 491
Query: 232 GKYVPRAI 255
GK+VPRA+
Sbjct: 492 GKHVPRAV 499
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 96.7 bits (230), Expect = 2e-20
Identities = 49/133 (36%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++
Sbjct: 653 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLAD 712
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P+VS VVEPYN+
Sbjct: 713 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 772
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 773 I-LTTHTTLEHSD 784
Score = 95.5 bits (227), Expect = 4e-20
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD VLD +RK ++
Sbjct: 132 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 191
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 192 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 251
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 252 I-LTTHTTLEHSD 263
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
+RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 646 HVPRAV 651
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +1
Query: 55 LYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEAS 228
L RE + + GQ G QIG WE+ EHGI P G D + + N +++E
Sbjct: 62 LILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETG 121
Query: 229 GGKYVPRAI 255
GK+VPRA+
Sbjct: 122 AGKHVPRAV 130
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 241 VPRAI 255
VPRA+
Sbjct: 574 VPRAV 578
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 95.9 bits (228), Expect = 3e-20
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 67 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEIIDLVLDRIRKLAD 126
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P+VS VVEPYN+
Sbjct: 127 QCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNS 186
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 187 I-LTTHTTLEHSD 198
Score = 53.6 bits (123), Expect = 2e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N +++E GK+
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 241 VPRAI 255
VPRA+
Sbjct: 61 VPRAV 65
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 94.7 bits (225), Expect = 7e-20
Identities = 46/132 (34%), Positives = 75/132 (56%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D+VLD +RK ++
Sbjct: 69 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDTVLDRLRKLADG 128
Query: 441 CDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNAT 620
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 129 CTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSV 188
Query: 621 SLSSPA*LKNTD 656
L++ L+++D
Sbjct: 189 -LTTHTTLEHSD 199
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 238 YVPRAISSTWSP 273
+VPRA+ P
Sbjct: 61 HVPRAVFCDLEP 72
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 94.3 bits (224), Expect = 9e-20
Identities = 45/133 (33%), Positives = 75/133 (56%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G + +D+VLD +RK ++
Sbjct: 486 VDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKDHIDNVLDRIRKLAD 545
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 546 QCSGLQGFLVFHSFGGGTGSGFSALLLERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 605
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 606 V-LTTHTTLEHSD 617
Score = 91.1 bits (216), Expect = 8e-19
Identities = 45/132 (34%), Positives = 74/132 (56%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G +L++ VLD +RK ++
Sbjct: 54 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKQLIEIVLDRLRKLADQ 113
Query: 441 CDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNAT 620
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 114 CTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSI 173
Query: 621 SLSSPA*LKNTD 656
L++ L+++D
Sbjct: 174 -LTTHTTLEHSD 184
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE V + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 417 YEERECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 476
Query: 232 GKYVPRAISSTWSPA 276
GK+VPRA+ P+
Sbjct: 477 GKHVPRAVFVDLEPS 491
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 109 IGAKFWEIISDEHGIDPTGAYHGDSDLQL--ERINVYYNEASGGKYVPRAISSTWSP 273
+G WE+ EHGI P G D + + N +++E GK+VPRA+ P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFCDLEP 57
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 93.9 bits (223), Expect = 1e-19
Identities = 46/132 (34%), Positives = 74/132 (56%)
Frame = +3
Query: 261 DLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESES 440
DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK ++
Sbjct: 873 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEMIDLVLDRIRKLADQ 932
Query: 441 CDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNAT 620
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 933 CTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSI 992
Query: 621 SLSSPA*LKNTD 656
L++ L+++D
Sbjct: 993 -LTTHTTLEHSD 1003
Score = 92.7 bits (220), Expect = 3e-19
Identities = 47/133 (35%), Positives = 73/133 (54%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E +D VLD +RK ++
Sbjct: 439 VDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKEQIDIVLDRLRKLAD 498
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P +S VVEPYN+
Sbjct: 499 GCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPHISSAVVEPYNS 558
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 559 I-LTTHTTLEHSD 570
Score = 55.6 bits (128), Expect = 4e-08
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 58 YKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASG 231
Y+ RE + + GQ G Q+G WE+ EHGI P G D + + N +++E
Sbjct: 803 YEERECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 862
Query: 232 GKYVPRAISSTWSP 273
GK+VPRA+ + P
Sbjct: 863 GKHVPRAVFADLEP 876
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 67 REIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGKY 240
RE + + GQ G QIG WE+ EHGI P G D + + N ++ E GK+
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 241 VPRAI 255
VPRA+
Sbjct: 433 VPRAV 437
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 93.5 bits (222), Expect = 2e-19
Identities = 47/133 (35%), Positives = 74/133 (55%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD RK ++
Sbjct: 68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRCRKLAD 127
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S +++ P+P++S VVEPYN+
Sbjct: 128 QCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNS 187
Query: 618 TSLSSPA*LKNTD 656
L++ L+++D
Sbjct: 188 I-LTTHTTLEHSD 199
Score = 54.4 bits (125), Expect = 9e-08
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G Q+G WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAI 255
+VPRA+
Sbjct: 61 HVPRAV 66
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 93.1 bits (221), Expect = 2e-19
Identities = 47/138 (34%), Positives = 76/138 (55%)
Frame = +3
Query: 255 LVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKES 434
LVDLEP +D VR+G + ++ P+ + G+ A NN+A+GHYT G E+V+ V+D +RK +
Sbjct: 978 LVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEVVMDKIRKMT 1037
Query: 435 ESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYN 614
+ C LQGF + +S ++V P+P +S VVEPYN
Sbjct: 1038 DQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVDYGKKSKLEFAVYPAPHISTAVVEPYN 1097
Query: 615 ATSLSSPA*LKNTDETLL 668
+ L++ L+++D T +
Sbjct: 1098 SV-LTTHTTLEHSDCTFM 1114
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 92.3 bits (219), Expect = 4e-19
Identities = 47/133 (35%), Positives = 73/133 (54%)
Frame = +3
Query: 258 VDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESE 437
VDLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++
Sbjct: 33 VDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLAD 92
Query: 438 SCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNA 617
C LQGF + +S ++V P+P++S VVEPYN+
Sbjct: 93 QCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNS 152
Query: 618 TSLSSPA*LKNTD 656
LS+ L+++D
Sbjct: 153 I-LSTHTTLEHSD 164
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 87.0 bits (206), Expect = 1e-17
Identities = 42/93 (45%), Positives = 55/93 (59%)
Frame = +3
Query: 342 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLXXXXXXXXXXXXXXXXXX 521
Q+ A NNWAKG YTEGAEL+DS +D +RK +E+CD +QGFQ+
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLS 61
Query: 522 XXVKSTPTES*THYSVVPSPKVSDTVVEPYNAT 620
+ P + + V+PSP VS+TV EPYNAT
Sbjct: 62 KIREEYPDRLVSSFCVLPSPLVSETVTEPYNAT 94
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 86.2 bits (204), Expect = 2e-17
Identities = 43/125 (34%), Positives = 69/125 (55%)
Frame = +3
Query: 282 DSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 461
D VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF
Sbjct: 13 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGF 72
Query: 462 QLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNATSLSSPA* 641
+ +S +++ P+P++S VVEPYN+ L++
Sbjct: 73 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSI-LTTHTT 131
Query: 642 LKNTD 656
L+++D
Sbjct: 132 LEHSD 136
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 83.8 bits (198), Expect = 1e-16
Identities = 42/123 (34%), Positives = 68/123 (55%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 467
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK ++ C LQGF +
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLI 62
Query: 468 XXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNATSLSSPA*LK 647
+S +++ P+P++S VVEPYN+ L++ L+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSI-LTTHTTLE 121
Query: 648 NTD 656
++D
Sbjct: 122 HSD 124
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 78.6 bits (185), Expect = 5e-15
Identities = 40/123 (32%), Positives = 66/123 (53%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQL 467
+R+G + Q+F P+ + G+ A NN+A+GHYT G E +D LD +RK ++ C LQGF +
Sbjct: 3 IRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLI 62
Query: 468 XXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNATSLSSPA*LK 647
+S ++V P+P++S VVEPYN+ L++ L+
Sbjct: 63 FHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSI-LTTHTTLE 121
Query: 648 NTD 656
++D
Sbjct: 122 HSD 124
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 67.3 bits (157), Expect = 1e-11
Identities = 36/112 (32%), Positives = 58/112 (51%)
Frame = +3
Query: 321 PDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLXXXXXXXXXXX 500
P+ + G+ A NN+A+GHYT G + VD VLD +RK ++ C LQGF +
Sbjct: 79 PEQLITGKEDAANNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSG 138
Query: 501 XXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVEPYNATSLSSPA*LKNTD 656
+S ++V P+P ++ VVEPYN+ L++ L+++D
Sbjct: 139 FSSLLMERLSVDYGKKSKLEFAVYPAPHIASAVVEPYNSI-LTTHTTLEHSD 189
Score = 56.0 bits (129), Expect = 3e-08
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDL--QLERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + N +++E GK
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 238 YVPRAISSTWSPAPWTLSAPDL 303
+VPRA+ P LS L
Sbjct: 61 HVPRAVFVDLEPTVVALSPEQL 82
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 59.7 bits (138), Expect = 2e-09
Identities = 24/47 (51%), Positives = 34/47 (72%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VR+G + Q+F P+ + G+ A NN+A+GHYT G EL+D VLD +RK
Sbjct: 3 VRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRK 49
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 64 MREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQ--LERINVYYNEASGGK 237
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GGK
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 238 YVPRAISSTWSPA 276
+VPRA+ P+
Sbjct: 61 HVPRAVFVDLEPS 73
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/80 (40%), Positives = 41/80 (51%)
Frame = +3
Query: 420 VRKESESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTV 599
+RKE+E CD +QGFQL + P + SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 600 VEPYNATSLSSPA*LKNTDE 659
VEPYNA +LS L+ TDE
Sbjct: 61 VEPYNA-ALSVHQLLETTDE 79
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +3
Query: 288 VRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRK 428
VR G + +F PD + G+ A NN+A+GHYT G E +D L+ +RK
Sbjct: 3 VRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRK 49
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +3
Query: 321 PDNFVFGQS-GAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGF 461
P F Q G+GNNWA G G + +D VLD+V++E E CD L GF
Sbjct: 94 PKGQQFSQKRGSGNNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGF 141
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 73 IVHLQAGQCGNQIGAKFWEIISDE 144
IV LQ GQCGNQIG + +++I ++
Sbjct: 3 IVTLQLGQCGNQIGRELFDLIVED 26
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Frame = +1
Query: 52 NLYKMREIVHLQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER----INVYYN 219
++ MRE + + GQ G QIG WE+ EHGI P G H SD +R + +++
Sbjct: 192 SIQTMRECLSIHVGQAGVQIGNACWELYCLEHGIQPDG--HMPSDQSADRCDDSFSTFFS 249
Query: 220 EASGGKY 240
E + GK+
Sbjct: 250 ETASGKH 256
Score = 31.1 bits (67), Expect = 0.92
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +3
Query: 426 KESESCDCLQGFQLXXXXXXXXXXXXXXXXXXXXVKSTPTES*THYSVVPSPKVSDTVVE 605
K ++ C LQGF + S ++V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 606 PYNATSLSSPA*LKNTD 656
PYN+ L++ L+++D
Sbjct: 315 PYNSI-LTTHTTLEHSD 330
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/35 (51%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +1
Query: 121 FWEIISDEHGIDPTGAYHG-DSDLQLERINVYYNE 222
FWE+I++EHGIDP G S +Q +R+NVY++E
Sbjct: 1 FWEVIAEEHGIDPDGQCTAVQSKIQTDRLNVYFDE 35
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 39.5 bits (88), Expect = 0.003
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Frame = +3
Query: 258 VDLEPGTMDSVR--SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTE-----GAELVDSVLD 416
VD E + S R G GQ R N + G+ G GNN+A G++ G L+ +D
Sbjct: 44 VDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLHMTMD 102
Query: 417 VVRKESESCDCLQG 458
+RKE E CD G
Sbjct: 103 AMRKEVERCDSFAG 116
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 231 RQVRAPRHLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNW 365
+ ++A L+D+E G ++++ GP +F + SG GNNW
Sbjct: 71 KSLKARAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/32 (37%), Positives = 24/32 (75%)
Frame = +3
Query: 561 YSVVPSPKVSDTVVEPYNATSLSSPA*LKNTD 656
+++ P+P++S VVEPYN+ L++ L+++D
Sbjct: 44 FAIYPAPQISTAVVEPYNSI-LTTHTTLEHSD 74
>SB_46898| Best HMM Match : Amelogenin (HMM E-Value=4.2)
Length = 210
Score = 29.5 bits (63), Expect = 2.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP K+ +CP
Sbjct: 18 CPLKEMLDTPLCPLKKMLNTPLCP 41
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L AP CP ++ +CP
Sbjct: 172 CPLKEMLDAPLCPLKEMLDTPLCP 195
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = -3
Query: 376 CPLAQLLPAPDCPKTKLSGRKICP 305
CPL ++L P CP ++ +CP
Sbjct: 62 CPLKEMLDTPLCPLKEMLNTPLCP 85
>SB_50693| Best HMM Match : C2 (HMM E-Value=0)
Length = 1049
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -3
Query: 352 APDCPKTKLSGRKICPKGPERTESMVPGSKST 257
A DCP ++ +GR +CP P +S + +K++
Sbjct: 138 AVDCPTSRKNGRGLCPFPPPPLQSALKRAKAS 169
>SB_33307| Best HMM Match : NAF1 (HMM E-Value=1.5e-18)
Length = 1085
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 490 PG-PVWAPPHLKDP*RVPRQNHEHITQ*SPRPK 585
PG PVW PHL+ P P +H+ + Q +P P+
Sbjct: 890 PGQPVWQNPHLRTPFTPP--SHQDMRQYAPPPQ 920
>SB_9489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 159
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 219 IVVYIDALQLQVRVPM-VGTGGVDAVLVGDDLPELSSN 109
I VY DA++LQV P+ G+D + V D EL +
Sbjct: 48 ITVYADAVELQVTYPLRAPLRGIDLITVYADAVELQGS 85
>SB_47985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +2
Query: 590 RHCRRTIQCDFSQFTSLVEKHRRNLTASNNEGLYY 694
R +R + C SQ + +H+R++T+ ++ L+Y
Sbjct: 113 REHKRDVTCSTSQTLNYAREHKRDVTSLTSQTLHY 147
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,037,061
Number of Sequences: 59808
Number of extensions: 450757
Number of successful extensions: 1335
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1877743452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -